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Update src/components/biokinetic_mesh.py
Browse files- src/components/biokinetic_mesh.py +425 -425
src/components/biokinetic_mesh.py
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"""
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Biokinetic Neural Mesh - A biomimetic neural routing system
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Combines biological neural patterns with kinetic state processing for ultra-fast routing
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"""
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try:
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import numpy as np
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except Exception:
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np = None
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try:
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import torch
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except Exception:
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torch = None
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from typing import Dict, List, Tuple, Optional, Set, Any
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from dataclasses import dataclass
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import logging
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from pathlib import Path
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import json
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from
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logger = logging.getLogger(__name__)
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@dataclass
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class SynapticNode:
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"""Represents a node in the biokinetic mesh"""
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id: str
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energy: float = 1.0
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connections: Dict[str, float] = None
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activation_pattern: 'np.ndarray' = None
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kinetic_state: float = 0.0
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def __post_init__(self):
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self.connections = self.connections or {}
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self.activation_pattern = self.activation_pattern or np.random.rand(128)
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class BioKineticMesh:
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"""
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Biokinetic Neural Mesh - A biomimetic routing system
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Features:
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- Ultra-fast pattern recognition (<0.3ms)
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- Self-evolving neural pathways
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- Energy-based routing
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- Synaptic pruning for optimization
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- Fractal memory patterns
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- Quantum state integration
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- Multi-perspective resonance
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- Adaptive pathway evolution
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"""
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def __init__(self,
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initial_nodes: int = 512,
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energy_threshold: float = 0.3,
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learning_rate: float = 0.01,
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prune_threshold: float = 0.1,
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quantum_influence: float = 0.3,
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perspective_resonance: float = 0.2):
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self.nodes: Dict[str, SynapticNode] = {}
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self.energy_threshold = energy_threshold
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self.learning_rate = learning_rate
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self.prune_threshold = prune_threshold
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self.quantum_influence = quantum_influence
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self.perspective_resonance = perspective_resonance
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# Kinetic state tensors
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if torch is not None:
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self.kinetic_matrix = torch.zeros((initial_nodes, initial_nodes))
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self.energy_gradients = torch.zeros(initial_nodes)
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else:
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self.kinetic_matrix = None
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self.energy_gradients = [0.0] * initial_nodes
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# Pattern recognition layers
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if np is not None:
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self.pattern_embeddings = np.random.rand(initial_nodes, 128)
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else:
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self.pattern_embeddings = [[0.0]*128 for _ in range(initial_nodes)]
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# Activation history
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self.activation_history: List['np.ndarray'] = []
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# Integration components
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self.quantum_resonance: Dict[str, float] = {} # Quantum state influence
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self.perspective_weights: Dict[str, Dict[str, float]] = {} # Per-node perspective weights
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self.active_pathways: Set[Tuple[str, str]] = set() # Currently active neural pathways
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# Initialize mesh
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# Initialize mesh
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try:
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self._initialize_mesh(initial_nodes)
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except Exception as e:
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logger.warning(f"Failed to fully initialize mesh: {e}")
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def _initialize_mesh(self, node_count: int):
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"""Initialize the biokinetic mesh with initial nodes"""
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for i in range(node_count):
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node_id = f"BK_{i}"
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self.nodes[node_id] = SynapticNode(
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id=node_id,
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energy=1.0,
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activation_pattern=np.random.rand(128)
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)
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# Create initial connections (sparse)
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for node in self.nodes.values():
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connection_count = np.random.randint(5, 15)
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target_nodes = np.random.choice(
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list(self.nodes.keys()),
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size=connection_count,
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replace=False
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)
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node.connections = {
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target: np.random.rand()
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for target in target_nodes
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if target != node.id
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}
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def route_intent(self,
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input_pattern: np.ndarray,
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context: Optional[Dict] = None) -> Tuple[str, float]:
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"""
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Route an input pattern through the mesh to determine intent
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Returns in under 0.3ms
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"""
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# Convert input to energy pattern
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energy_pattern = self._compute_energy_pattern(input_pattern)
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# Fast activation: fall back to python loop if torch missing
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activations = []
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for node in self.nodes.values():
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try:
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act = self._compute_node_activation(node, energy_pattern, context)
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except Exception:
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act = 0.0
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activations.append(act)
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# Find highest energy path
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max_idx = int(max(range(len(activations)), key=lambda i: activations[i]))
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node_id = list(self.nodes.keys())[max_idx]
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confidence = float(activations[max_idx])
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# Update kinetic state
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self._update_kinetic_state(node_id, confidence)
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return node_id, confidence
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def _compute_energy_pattern(self, input_pattern: np.ndarray) -> torch.Tensor:
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"""Convert input pattern to energy distribution"""
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# Normalize input
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if np is not None:
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input_norm = input_pattern / (np.linalg.norm(input_pattern) + 1e-12)
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else:
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# Simple python normalization
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mag = sum(x*x for x in input_pattern) ** 0.5
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input_norm = [x / (mag + 1e-12) for x in input_pattern]
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# Create energy tensor if torch available
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if torch is not None and np is not None:
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energy = torch.from_numpy(input_norm).float()
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energy = self._apply_kinetic_transform(energy)
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return energy
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else:
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return input_norm
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def _compute_node_activation(self,
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node: SynapticNode,
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energy_pattern: torch.Tensor,
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context: Optional[Dict]) -> float:
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"""Compute node activation based on energy pattern and context"""
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# Base activation from pattern match (torch optional)
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if torch is not None:
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base_activation = torch.cosine_similarity(
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energy_pattern,
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torch.from_numpy(node.activation_pattern).float().unsqueeze(0),
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dim=1
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)
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base_val = base_activation.item()
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else:
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# fallback cosine similarity
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a = energy_pattern if isinstance(energy_pattern, (list, tuple)) else energy_pattern.tolist()
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b = node.activation_pattern.tolist() if hasattr(node.activation_pattern, 'tolist') else list(node.activation_pattern)
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dot = sum(x*y for x,y in zip(a,b))
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norm_a = sum(x*x for x in a) ** 0.5
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norm_b = sum(x*x for x in b) ** 0.5
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base_val = dot / (norm_a * norm_b + 1e-12)
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# Apply kinetic state
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kinetic_boost = node.kinetic_state * self.learning_rate
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# Context influence
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context_factor = 1.0
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if context:
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context_pattern = self._context_to_pattern(context)
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if torch is not None:
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context_match = torch.cosine_similarity(
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torch.from_numpy(context_pattern).float().unsqueeze(0),
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torch.from_numpy(node.activation_pattern).float().unsqueeze(0),
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dim=1
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)
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context_factor = 1.0 + (context_match.item() * 0.5)
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else:
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# simple fallback dot match
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a = context_pattern
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b = node.activation_pattern.tolist() if hasattr(node.activation_pattern, 'tolist') else list(node.activation_pattern)
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dot = sum(x*y for x,y in zip(a,b))
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norm_a = sum(x*x for x in a) ** 0.5
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norm_b = sum(x*x for x in b) ** 0.5
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match = dot / (norm_a * norm_b + 1e-12)
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context_factor = 1.0 + (match * 0.5)
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return (base_val + kinetic_boost) * context_factor
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def _apply_kinetic_transform(self, energy: torch.Tensor) -> torch.Tensor:
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"""Apply kinetic transformation to energy pattern"""
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if torch is not None:
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# Create momentum factor
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momentum = torch.sigmoid(self.energy_gradients.mean())
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# Apply momentum to energy
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energy = energy * (1.0 + momentum)
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# Normalize
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energy = energy / energy.norm()
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return energy
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else:
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mean_grad = sum(self.energy_gradients)/len(self.energy_gradients) if self.energy_gradients else 0.0
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momentum = 1.0 / (1.0 + (2.718281828 ** (-mean_grad)))
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energy = [e * (1.0 + momentum) for e in energy]
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mag = sum(x*x for x in energy) ** 0.5
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energy = [x / (mag + 1e-12) for x in energy]
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return energy
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def _update_kinetic_state(self, node_id: str, activation: float):
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"""Update kinetic state of the network"""
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# Update node energy
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node = self.nodes[node_id]
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node.kinetic_state += self.learning_rate * (activation - node.kinetic_state)
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# Update connected nodes
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for target_id, weight in node.connections.items():
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if target_id in self.nodes:
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target = self.nodes[target_id]
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target.kinetic_state += (
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self.learning_rate * weight * (activation - target.kinetic_state)
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)
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def _context_to_pattern(self, context: Dict) -> np.ndarray:
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"""Convert context dictionary to pattern vector"""
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# Create empty pattern
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if np is not None:
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pattern = np.zeros(128)
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else:
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pattern = [0.0]*128
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# Add context influences
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if "mode" in context:
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pattern += self.pattern_embeddings[
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hash(context["mode"]) % len(self.pattern_embeddings)
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]
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if "priority" in context:
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priority_factor = float(context["priority"]) / 10.0
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pattern *= (1.0 + priority_factor)
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# Normalize
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if np is not None:
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pattern = pattern / (np.linalg.norm(pattern) + 1e-8)
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else:
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mag = sum(x*x for x in pattern) ** 0.5
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pattern = [x / (mag + 1e-8) for x in pattern]
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return pattern
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def prune_connections(self):
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"""Remove weak or unused connections"""
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for node in self.nodes.values():
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# Find weak connections
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weak_connections = [
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target_id
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for target_id, weight in node.connections.items()
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if weight < self.prune_threshold
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]
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# Remove weak connections
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for target_id in weak_connections:
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del node.connections[target_id]
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# Normalize remaining connections
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if node.connections:
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total_weight = sum(node.connections.values())
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for target_id in node.connections:
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node.connections[target_id] /= total_weight
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def integrate_quantum_state(self, quantum_web: QuantumSpiderweb, node_id: str):
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"""Integrate quantum web state with biokinetic mesh"""
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# Get quantum state for this node
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quantum_state = quantum_web.get_node_state(node_id)
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if quantum_state:
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# Update quantum resonance
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self.quantum_resonance[node_id] = quantum_state["coherence"]
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# Influence node connections based on quantum state
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node = self.nodes.get(node_id)
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if node:
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quantum_boost = quantum_state["coherence"] * self.quantum_influence
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for target_id in node.connections:
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node.connections[target_id] *= (1.0 + quantum_boost)
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# Update node's kinetic state
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node.kinetic_state += quantum_boost
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def integrate_perspective_results(self,
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node_id: str,
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perspective_results: Dict[str, Dict[str, Any]]):
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"""Integrate perspective processing results into the mesh"""
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if node_id not in self.perspective_weights:
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self.perspective_weights[node_id] = {}
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# Update perspective weights based on confidence
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total_confidence = 0.0
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for perspective, result in perspective_results.items():
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if "confidence" in result:
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confidence = result["confidence"]
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self.perspective_weights[node_id][perspective] = confidence
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total_confidence += confidence
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if total_confidence > 0:
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# Normalize weights
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for perspective in self.perspective_weights[node_id]:
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self.perspective_weights[node_id][perspective] /= total_confidence
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# Apply perspective resonance to node
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node = self.nodes.get(node_id)
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if node:
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resonance = sum(
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weight * self.perspective_resonance
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for weight in self.perspective_weights[node_id].values()
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)
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node.kinetic_state *= (1.0 + resonance)
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def strengthen_pathway(self, node_sequence: List[str], reward: float):
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"""Strengthen a successful pathway with integrated effects"""
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for i in range(len(node_sequence) - 1):
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current_id = node_sequence[i]
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next_id = node_sequence[i + 1]
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if current_id in self.nodes and next_id in self.nodes:
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current_node = self.nodes[current_id]
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# Add path to active pathways
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self.active_pathways.add((current_id, next_id))
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# Calculate integrated boost
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quantum_boost = self.quantum_resonance.get(current_id, 0.0)
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perspective_boost = sum(
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self.perspective_weights.get(current_id, {}).values()
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) / max(len(self.perspective_weights.get(current_id, {})), 1)
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total_boost = (
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1.0 +
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quantum_boost * self.quantum_influence +
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perspective_boost * self.perspective_resonance
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)
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# Strengthen connection with integrated boost
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if next_id in current_node.connections:
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current_node.connections[next_id] += (
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self.learning_rate * reward * total_boost
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)
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else:
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current_node.connections[next_id] = (
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self.learning_rate * reward * total_boost
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)
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# Update kinetic state
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current_node.kinetic_state += (
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self.learning_rate * reward * total_boost
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)
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def save_state(self, path: Path):
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"""Save mesh state to file"""
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state = {
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"nodes": {
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node_id: {
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-
"energy": node.energy,
|
| 390 |
-
"connections": node.connections,
|
| 391 |
-
"kinetic_state": node.kinetic_state,
|
| 392 |
-
"activation_pattern": node.activation_pattern.tolist()
|
| 393 |
-
}
|
| 394 |
-
for node_id, node in self.nodes.items()
|
| 395 |
-
},
|
| 396 |
-
"params": {
|
| 397 |
-
"energy_threshold": self.energy_threshold,
|
| 398 |
-
"learning_rate": self.learning_rate,
|
| 399 |
-
"prune_threshold": self.prune_threshold
|
| 400 |
-
}
|
| 401 |
-
}
|
| 402 |
-
|
| 403 |
-
with open(path, 'w') as f:
|
| 404 |
-
json.dump(state, f)
|
| 405 |
-
|
| 406 |
-
def load_state(self, path: Path):
|
| 407 |
-
"""Load mesh state from file"""
|
| 408 |
-
with open(path, 'r') as f:
|
| 409 |
-
state = json.load(f)
|
| 410 |
-
|
| 411 |
-
# Restore nodes
|
| 412 |
-
self.nodes = {
|
| 413 |
-
node_id: SynapticNode(
|
| 414 |
-
id=node_id,
|
| 415 |
-
energy=data["energy"],
|
| 416 |
-
connections=data["connections"],
|
| 417 |
-
activation_pattern=np.array(data["activation_pattern"]),
|
| 418 |
-
kinetic_state=data["kinetic_state"]
|
| 419 |
-
)
|
| 420 |
-
for node_id, data in state["nodes"].items()
|
| 421 |
-
}
|
| 422 |
-
|
| 423 |
-
# Restore parameters
|
| 424 |
-
self.energy_threshold = state["params"]["energy_threshold"]
|
| 425 |
-
self.learning_rate = state["params"]["learning_rate"]
|
| 426 |
self.prune_threshold = state["params"]["prune_threshold"]
|
|
|
|
| 1 |
+
"""
|
| 2 |
+
Biokinetic Neural Mesh - A biomimetic neural routing system
|
| 3 |
+
Combines biological neural patterns with kinetic state processing for ultra-fast routing
|
| 4 |
+
"""
|
| 5 |
+
|
| 6 |
+
try:
|
| 7 |
+
import numpy as np
|
| 8 |
+
except Exception:
|
| 9 |
+
np = None
|
| 10 |
+
|
| 11 |
+
try:
|
| 12 |
+
import torch
|
| 13 |
+
except Exception:
|
| 14 |
+
torch = None
|
| 15 |
+
|
| 16 |
+
from typing import Dict, List, Tuple, Optional, Set, Any
|
| 17 |
+
from dataclasses import dataclass
|
| 18 |
+
import logging
|
| 19 |
+
from pathlib import Path
|
| 20 |
+
import json
|
| 21 |
+
from .quantum_spiderweb import QuantumSpiderweb # Changed to relative import
|
| 22 |
+
|
| 23 |
+
logger = logging.getLogger(__name__)
|
| 24 |
+
|
| 25 |
+
@dataclass
|
| 26 |
+
class SynapticNode:
|
| 27 |
+
"""Represents a node in the biokinetic mesh"""
|
| 28 |
+
id: str
|
| 29 |
+
energy: float = 1.0
|
| 30 |
+
connections: Dict[str, float] = None
|
| 31 |
+
activation_pattern: 'np.ndarray' = None
|
| 32 |
+
kinetic_state: float = 0.0
|
| 33 |
+
|
| 34 |
+
def __post_init__(self):
|
| 35 |
+
self.connections = self.connections or {}
|
| 36 |
+
self.activation_pattern = self.activation_pattern or np.random.rand(128)
|
| 37 |
+
|
| 38 |
+
class BioKineticMesh:
|
| 39 |
+
"""
|
| 40 |
+
Biokinetic Neural Mesh - A biomimetic routing system
|
| 41 |
+
|
| 42 |
+
Features:
|
| 43 |
+
- Ultra-fast pattern recognition (<0.3ms)
|
| 44 |
+
- Self-evolving neural pathways
|
| 45 |
+
- Energy-based routing
|
| 46 |
+
- Synaptic pruning for optimization
|
| 47 |
+
- Fractal memory patterns
|
| 48 |
+
- Quantum state integration
|
| 49 |
+
- Multi-perspective resonance
|
| 50 |
+
- Adaptive pathway evolution
|
| 51 |
+
"""
|
| 52 |
+
|
| 53 |
+
def __init__(self,
|
| 54 |
+
initial_nodes: int = 512,
|
| 55 |
+
energy_threshold: float = 0.3,
|
| 56 |
+
learning_rate: float = 0.01,
|
| 57 |
+
prune_threshold: float = 0.1,
|
| 58 |
+
quantum_influence: float = 0.3,
|
| 59 |
+
perspective_resonance: float = 0.2):
|
| 60 |
+
self.nodes: Dict[str, SynapticNode] = {}
|
| 61 |
+
self.energy_threshold = energy_threshold
|
| 62 |
+
self.learning_rate = learning_rate
|
| 63 |
+
self.prune_threshold = prune_threshold
|
| 64 |
+
self.quantum_influence = quantum_influence
|
| 65 |
+
self.perspective_resonance = perspective_resonance
|
| 66 |
+
|
| 67 |
+
# Kinetic state tensors
|
| 68 |
+
if torch is not None:
|
| 69 |
+
self.kinetic_matrix = torch.zeros((initial_nodes, initial_nodes))
|
| 70 |
+
self.energy_gradients = torch.zeros(initial_nodes)
|
| 71 |
+
else:
|
| 72 |
+
self.kinetic_matrix = None
|
| 73 |
+
self.energy_gradients = [0.0] * initial_nodes
|
| 74 |
+
|
| 75 |
+
# Pattern recognition layers
|
| 76 |
+
if np is not None:
|
| 77 |
+
self.pattern_embeddings = np.random.rand(initial_nodes, 128)
|
| 78 |
+
else:
|
| 79 |
+
self.pattern_embeddings = [[0.0]*128 for _ in range(initial_nodes)]
|
| 80 |
+
|
| 81 |
+
# Activation history
|
| 82 |
+
self.activation_history: List['np.ndarray'] = []
|
| 83 |
+
|
| 84 |
+
# Integration components
|
| 85 |
+
self.quantum_resonance: Dict[str, float] = {} # Quantum state influence
|
| 86 |
+
self.perspective_weights: Dict[str, Dict[str, float]] = {} # Per-node perspective weights
|
| 87 |
+
self.active_pathways: Set[Tuple[str, str]] = set() # Currently active neural pathways
|
| 88 |
+
|
| 89 |
+
# Initialize mesh
|
| 90 |
+
# Initialize mesh
|
| 91 |
+
try:
|
| 92 |
+
self._initialize_mesh(initial_nodes)
|
| 93 |
+
except Exception as e:
|
| 94 |
+
logger.warning(f"Failed to fully initialize mesh: {e}")
|
| 95 |
+
|
| 96 |
+
def _initialize_mesh(self, node_count: int):
|
| 97 |
+
"""Initialize the biokinetic mesh with initial nodes"""
|
| 98 |
+
for i in range(node_count):
|
| 99 |
+
node_id = f"BK_{i}"
|
| 100 |
+
self.nodes[node_id] = SynapticNode(
|
| 101 |
+
id=node_id,
|
| 102 |
+
energy=1.0,
|
| 103 |
+
activation_pattern=np.random.rand(128)
|
| 104 |
+
)
|
| 105 |
+
|
| 106 |
+
# Create initial connections (sparse)
|
| 107 |
+
for node in self.nodes.values():
|
| 108 |
+
connection_count = np.random.randint(5, 15)
|
| 109 |
+
target_nodes = np.random.choice(
|
| 110 |
+
list(self.nodes.keys()),
|
| 111 |
+
size=connection_count,
|
| 112 |
+
replace=False
|
| 113 |
+
)
|
| 114 |
+
node.connections = {
|
| 115 |
+
target: np.random.rand()
|
| 116 |
+
for target in target_nodes
|
| 117 |
+
if target != node.id
|
| 118 |
+
}
|
| 119 |
+
|
| 120 |
+
def route_intent(self,
|
| 121 |
+
input_pattern: np.ndarray,
|
| 122 |
+
context: Optional[Dict] = None) -> Tuple[str, float]:
|
| 123 |
+
"""
|
| 124 |
+
Route an input pattern through the mesh to determine intent
|
| 125 |
+
Returns in under 0.3ms
|
| 126 |
+
"""
|
| 127 |
+
# Convert input to energy pattern
|
| 128 |
+
energy_pattern = self._compute_energy_pattern(input_pattern)
|
| 129 |
+
|
| 130 |
+
# Fast activation: fall back to python loop if torch missing
|
| 131 |
+
activations = []
|
| 132 |
+
for node in self.nodes.values():
|
| 133 |
+
try:
|
| 134 |
+
act = self._compute_node_activation(node, energy_pattern, context)
|
| 135 |
+
except Exception:
|
| 136 |
+
act = 0.0
|
| 137 |
+
activations.append(act)
|
| 138 |
+
|
| 139 |
+
# Find highest energy path
|
| 140 |
+
max_idx = int(max(range(len(activations)), key=lambda i: activations[i]))
|
| 141 |
+
node_id = list(self.nodes.keys())[max_idx]
|
| 142 |
+
confidence = float(activations[max_idx])
|
| 143 |
+
|
| 144 |
+
# Update kinetic state
|
| 145 |
+
self._update_kinetic_state(node_id, confidence)
|
| 146 |
+
|
| 147 |
+
return node_id, confidence
|
| 148 |
+
|
| 149 |
+
def _compute_energy_pattern(self, input_pattern: np.ndarray) -> torch.Tensor:
|
| 150 |
+
"""Convert input pattern to energy distribution"""
|
| 151 |
+
# Normalize input
|
| 152 |
+
if np is not None:
|
| 153 |
+
input_norm = input_pattern / (np.linalg.norm(input_pattern) + 1e-12)
|
| 154 |
+
else:
|
| 155 |
+
# Simple python normalization
|
| 156 |
+
mag = sum(x*x for x in input_pattern) ** 0.5
|
| 157 |
+
input_norm = [x / (mag + 1e-12) for x in input_pattern]
|
| 158 |
+
|
| 159 |
+
# Create energy tensor if torch available
|
| 160 |
+
if torch is not None and np is not None:
|
| 161 |
+
energy = torch.from_numpy(input_norm).float()
|
| 162 |
+
energy = self._apply_kinetic_transform(energy)
|
| 163 |
+
return energy
|
| 164 |
+
else:
|
| 165 |
+
return input_norm
|
| 166 |
+
|
| 167 |
+
def _compute_node_activation(self,
|
| 168 |
+
node: SynapticNode,
|
| 169 |
+
energy_pattern: torch.Tensor,
|
| 170 |
+
context: Optional[Dict]) -> float:
|
| 171 |
+
"""Compute node activation based on energy pattern and context"""
|
| 172 |
+
# Base activation from pattern match (torch optional)
|
| 173 |
+
if torch is not None:
|
| 174 |
+
base_activation = torch.cosine_similarity(
|
| 175 |
+
energy_pattern,
|
| 176 |
+
torch.from_numpy(node.activation_pattern).float().unsqueeze(0),
|
| 177 |
+
dim=1
|
| 178 |
+
)
|
| 179 |
+
base_val = base_activation.item()
|
| 180 |
+
else:
|
| 181 |
+
# fallback cosine similarity
|
| 182 |
+
a = energy_pattern if isinstance(energy_pattern, (list, tuple)) else energy_pattern.tolist()
|
| 183 |
+
b = node.activation_pattern.tolist() if hasattr(node.activation_pattern, 'tolist') else list(node.activation_pattern)
|
| 184 |
+
dot = sum(x*y for x,y in zip(a,b))
|
| 185 |
+
norm_a = sum(x*x for x in a) ** 0.5
|
| 186 |
+
norm_b = sum(x*x for x in b) ** 0.5
|
| 187 |
+
base_val = dot / (norm_a * norm_b + 1e-12)
|
| 188 |
+
|
| 189 |
+
# Apply kinetic state
|
| 190 |
+
kinetic_boost = node.kinetic_state * self.learning_rate
|
| 191 |
+
|
| 192 |
+
# Context influence
|
| 193 |
+
context_factor = 1.0
|
| 194 |
+
if context:
|
| 195 |
+
context_pattern = self._context_to_pattern(context)
|
| 196 |
+
if torch is not None:
|
| 197 |
+
context_match = torch.cosine_similarity(
|
| 198 |
+
torch.from_numpy(context_pattern).float().unsqueeze(0),
|
| 199 |
+
torch.from_numpy(node.activation_pattern).float().unsqueeze(0),
|
| 200 |
+
dim=1
|
| 201 |
+
)
|
| 202 |
+
context_factor = 1.0 + (context_match.item() * 0.5)
|
| 203 |
+
else:
|
| 204 |
+
# simple fallback dot match
|
| 205 |
+
a = context_pattern
|
| 206 |
+
b = node.activation_pattern.tolist() if hasattr(node.activation_pattern, 'tolist') else list(node.activation_pattern)
|
| 207 |
+
dot = sum(x*y for x,y in zip(a,b))
|
| 208 |
+
norm_a = sum(x*x for x in a) ** 0.5
|
| 209 |
+
norm_b = sum(x*x for x in b) ** 0.5
|
| 210 |
+
match = dot / (norm_a * norm_b + 1e-12)
|
| 211 |
+
context_factor = 1.0 + (match * 0.5)
|
| 212 |
+
|
| 213 |
+
return (base_val + kinetic_boost) * context_factor
|
| 214 |
+
|
| 215 |
+
def _apply_kinetic_transform(self, energy: torch.Tensor) -> torch.Tensor:
|
| 216 |
+
"""Apply kinetic transformation to energy pattern"""
|
| 217 |
+
if torch is not None:
|
| 218 |
+
# Create momentum factor
|
| 219 |
+
momentum = torch.sigmoid(self.energy_gradients.mean())
|
| 220 |
+
|
| 221 |
+
# Apply momentum to energy
|
| 222 |
+
energy = energy * (1.0 + momentum)
|
| 223 |
+
|
| 224 |
+
# Normalize
|
| 225 |
+
energy = energy / energy.norm()
|
| 226 |
+
|
| 227 |
+
return energy
|
| 228 |
+
else:
|
| 229 |
+
mean_grad = sum(self.energy_gradients)/len(self.energy_gradients) if self.energy_gradients else 0.0
|
| 230 |
+
momentum = 1.0 / (1.0 + (2.718281828 ** (-mean_grad)))
|
| 231 |
+
energy = [e * (1.0 + momentum) for e in energy]
|
| 232 |
+
mag = sum(x*x for x in energy) ** 0.5
|
| 233 |
+
energy = [x / (mag + 1e-12) for x in energy]
|
| 234 |
+
return energy
|
| 235 |
+
|
| 236 |
+
def _update_kinetic_state(self, node_id: str, activation: float):
|
| 237 |
+
"""Update kinetic state of the network"""
|
| 238 |
+
# Update node energy
|
| 239 |
+
node = self.nodes[node_id]
|
| 240 |
+
node.kinetic_state += self.learning_rate * (activation - node.kinetic_state)
|
| 241 |
+
|
| 242 |
+
# Update connected nodes
|
| 243 |
+
for target_id, weight in node.connections.items():
|
| 244 |
+
if target_id in self.nodes:
|
| 245 |
+
target = self.nodes[target_id]
|
| 246 |
+
target.kinetic_state += (
|
| 247 |
+
self.learning_rate * weight * (activation - target.kinetic_state)
|
| 248 |
+
)
|
| 249 |
+
|
| 250 |
+
def _context_to_pattern(self, context: Dict) -> np.ndarray:
|
| 251 |
+
"""Convert context dictionary to pattern vector"""
|
| 252 |
+
# Create empty pattern
|
| 253 |
+
if np is not None:
|
| 254 |
+
pattern = np.zeros(128)
|
| 255 |
+
else:
|
| 256 |
+
pattern = [0.0]*128
|
| 257 |
+
|
| 258 |
+
# Add context influences
|
| 259 |
+
if "mode" in context:
|
| 260 |
+
pattern += self.pattern_embeddings[
|
| 261 |
+
hash(context["mode"]) % len(self.pattern_embeddings)
|
| 262 |
+
]
|
| 263 |
+
|
| 264 |
+
if "priority" in context:
|
| 265 |
+
priority_factor = float(context["priority"]) / 10.0
|
| 266 |
+
pattern *= (1.0 + priority_factor)
|
| 267 |
+
|
| 268 |
+
# Normalize
|
| 269 |
+
if np is not None:
|
| 270 |
+
pattern = pattern / (np.linalg.norm(pattern) + 1e-8)
|
| 271 |
+
else:
|
| 272 |
+
mag = sum(x*x for x in pattern) ** 0.5
|
| 273 |
+
pattern = [x / (mag + 1e-8) for x in pattern]
|
| 274 |
+
|
| 275 |
+
return pattern
|
| 276 |
+
|
| 277 |
+
def prune_connections(self):
|
| 278 |
+
"""Remove weak or unused connections"""
|
| 279 |
+
for node in self.nodes.values():
|
| 280 |
+
# Find weak connections
|
| 281 |
+
weak_connections = [
|
| 282 |
+
target_id
|
| 283 |
+
for target_id, weight in node.connections.items()
|
| 284 |
+
if weight < self.prune_threshold
|
| 285 |
+
]
|
| 286 |
+
|
| 287 |
+
# Remove weak connections
|
| 288 |
+
for target_id in weak_connections:
|
| 289 |
+
del node.connections[target_id]
|
| 290 |
+
|
| 291 |
+
# Normalize remaining connections
|
| 292 |
+
if node.connections:
|
| 293 |
+
total_weight = sum(node.connections.values())
|
| 294 |
+
for target_id in node.connections:
|
| 295 |
+
node.connections[target_id] /= total_weight
|
| 296 |
+
|
| 297 |
+
def integrate_quantum_state(self, quantum_web: QuantumSpiderweb, node_id: str):
|
| 298 |
+
"""Integrate quantum web state with biokinetic mesh"""
|
| 299 |
+
# Get quantum state for this node
|
| 300 |
+
quantum_state = quantum_web.get_node_state(node_id)
|
| 301 |
+
|
| 302 |
+
if quantum_state:
|
| 303 |
+
# Update quantum resonance
|
| 304 |
+
self.quantum_resonance[node_id] = quantum_state["coherence"]
|
| 305 |
+
|
| 306 |
+
# Influence node connections based on quantum state
|
| 307 |
+
node = self.nodes.get(node_id)
|
| 308 |
+
if node:
|
| 309 |
+
quantum_boost = quantum_state["coherence"] * self.quantum_influence
|
| 310 |
+
for target_id in node.connections:
|
| 311 |
+
node.connections[target_id] *= (1.0 + quantum_boost)
|
| 312 |
+
|
| 313 |
+
# Update node's kinetic state
|
| 314 |
+
node.kinetic_state += quantum_boost
|
| 315 |
+
|
| 316 |
+
def integrate_perspective_results(self,
|
| 317 |
+
node_id: str,
|
| 318 |
+
perspective_results: Dict[str, Dict[str, Any]]):
|
| 319 |
+
"""Integrate perspective processing results into the mesh"""
|
| 320 |
+
if node_id not in self.perspective_weights:
|
| 321 |
+
self.perspective_weights[node_id] = {}
|
| 322 |
+
|
| 323 |
+
# Update perspective weights based on confidence
|
| 324 |
+
total_confidence = 0.0
|
| 325 |
+
for perspective, result in perspective_results.items():
|
| 326 |
+
if "confidence" in result:
|
| 327 |
+
confidence = result["confidence"]
|
| 328 |
+
self.perspective_weights[node_id][perspective] = confidence
|
| 329 |
+
total_confidence += confidence
|
| 330 |
+
|
| 331 |
+
if total_confidence > 0:
|
| 332 |
+
# Normalize weights
|
| 333 |
+
for perspective in self.perspective_weights[node_id]:
|
| 334 |
+
self.perspective_weights[node_id][perspective] /= total_confidence
|
| 335 |
+
|
| 336 |
+
# Apply perspective resonance to node
|
| 337 |
+
node = self.nodes.get(node_id)
|
| 338 |
+
if node:
|
| 339 |
+
resonance = sum(
|
| 340 |
+
weight * self.perspective_resonance
|
| 341 |
+
for weight in self.perspective_weights[node_id].values()
|
| 342 |
+
)
|
| 343 |
+
node.kinetic_state *= (1.0 + resonance)
|
| 344 |
+
|
| 345 |
+
def strengthen_pathway(self, node_sequence: List[str], reward: float):
|
| 346 |
+
"""Strengthen a successful pathway with integrated effects"""
|
| 347 |
+
for i in range(len(node_sequence) - 1):
|
| 348 |
+
current_id = node_sequence[i]
|
| 349 |
+
next_id = node_sequence[i + 1]
|
| 350 |
+
|
| 351 |
+
if current_id in self.nodes and next_id in self.nodes:
|
| 352 |
+
current_node = self.nodes[current_id]
|
| 353 |
+
|
| 354 |
+
# Add path to active pathways
|
| 355 |
+
self.active_pathways.add((current_id, next_id))
|
| 356 |
+
|
| 357 |
+
# Calculate integrated boost
|
| 358 |
+
quantum_boost = self.quantum_resonance.get(current_id, 0.0)
|
| 359 |
+
perspective_boost = sum(
|
| 360 |
+
self.perspective_weights.get(current_id, {}).values()
|
| 361 |
+
) / max(len(self.perspective_weights.get(current_id, {})), 1)
|
| 362 |
+
|
| 363 |
+
total_boost = (
|
| 364 |
+
1.0 +
|
| 365 |
+
quantum_boost * self.quantum_influence +
|
| 366 |
+
perspective_boost * self.perspective_resonance
|
| 367 |
+
)
|
| 368 |
+
|
| 369 |
+
# Strengthen connection with integrated boost
|
| 370 |
+
if next_id in current_node.connections:
|
| 371 |
+
current_node.connections[next_id] += (
|
| 372 |
+
self.learning_rate * reward * total_boost
|
| 373 |
+
)
|
| 374 |
+
else:
|
| 375 |
+
current_node.connections[next_id] = (
|
| 376 |
+
self.learning_rate * reward * total_boost
|
| 377 |
+
)
|
| 378 |
+
|
| 379 |
+
# Update kinetic state
|
| 380 |
+
current_node.kinetic_state += (
|
| 381 |
+
self.learning_rate * reward * total_boost
|
| 382 |
+
)
|
| 383 |
+
|
| 384 |
+
def save_state(self, path: Path):
|
| 385 |
+
"""Save mesh state to file"""
|
| 386 |
+
state = {
|
| 387 |
+
"nodes": {
|
| 388 |
+
node_id: {
|
| 389 |
+
"energy": node.energy,
|
| 390 |
+
"connections": node.connections,
|
| 391 |
+
"kinetic_state": node.kinetic_state,
|
| 392 |
+
"activation_pattern": node.activation_pattern.tolist()
|
| 393 |
+
}
|
| 394 |
+
for node_id, node in self.nodes.items()
|
| 395 |
+
},
|
| 396 |
+
"params": {
|
| 397 |
+
"energy_threshold": self.energy_threshold,
|
| 398 |
+
"learning_rate": self.learning_rate,
|
| 399 |
+
"prune_threshold": self.prune_threshold
|
| 400 |
+
}
|
| 401 |
+
}
|
| 402 |
+
|
| 403 |
+
with open(path, 'w') as f:
|
| 404 |
+
json.dump(state, f)
|
| 405 |
+
|
| 406 |
+
def load_state(self, path: Path):
|
| 407 |
+
"""Load mesh state from file"""
|
| 408 |
+
with open(path, 'r') as f:
|
| 409 |
+
state = json.load(f)
|
| 410 |
+
|
| 411 |
+
# Restore nodes
|
| 412 |
+
self.nodes = {
|
| 413 |
+
node_id: SynapticNode(
|
| 414 |
+
id=node_id,
|
| 415 |
+
energy=data["energy"],
|
| 416 |
+
connections=data["connections"],
|
| 417 |
+
activation_pattern=np.array(data["activation_pattern"]),
|
| 418 |
+
kinetic_state=data["kinetic_state"]
|
| 419 |
+
)
|
| 420 |
+
for node_id, data in state["nodes"].items()
|
| 421 |
+
}
|
| 422 |
+
|
| 423 |
+
# Restore parameters
|
| 424 |
+
self.energy_threshold = state["params"]["energy_threshold"]
|
| 425 |
+
self.learning_rate = state["params"]["learning_rate"]
|
| 426 |
self.prune_threshold = state["params"]["prune_threshold"]
|