Regino commited on
Commit Β·
4a29102
1
Parent(s): 1bd22cb
first commit
Browse files- .gitignore +2 -0
- app.py +180 -0
- con_mat.png +0 -0
- requirements.txt +6 -0
- rice_disease_cnn.pth +3 -0
- train.ipynb +0 -0
- train2.ipynb +0 -0
- train_loss.png +0 -0
- val_acc.png +0 -0
.gitignore
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rice_leaf_diseases/
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rice_leaf_diseases.zip
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app.py
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import streamlit as st
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import torch
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import torch.nn as nn
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import torch.nn.functional as F
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import torchvision.transforms as transforms
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from PIL import Image
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import os
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import random
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import pandas as pd
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import matplotlib.pyplot as plt
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import zipfile # Added for zip extraction
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# ---- Dataset Extraction Logic ----
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DATASET_ZIP = "rice_leaf_diseases.zip"
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DATASET_FOLDER = "rice_leaf_diseases"
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# Check and extract dataset if needed
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if not os.path.exists(DATASET_FOLDER):
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if os.path.exists(DATASET_ZIP):
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with zipfile.ZipFile(DATASET_ZIP, 'r') as zip_ref:
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zip_ref.extractall()
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st.success("Dataset extracted successfully!")
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else:
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st.error(f"Dataset zip file '{DATASET_ZIP}' not found!")
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else:
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st.toast("Dataset already available!", icon="β
")
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# Define Model Class
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class RiceDiseaseCNN(nn.Module):
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def __init__(self, num_classes):
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super(RiceDiseaseCNN, self).__init__()
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self.conv1 = nn.Conv2d(3, 32, kernel_size=3, padding=1)
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self.conv2 = nn.Conv2d(32, 64, kernel_size=3, padding=1)
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self.conv3 = nn.Conv2d(64, 128, kernel_size=3, padding=1)
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self.bn1 = nn.BatchNorm2d(32)
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self.bn2 = nn.BatchNorm2d(64)
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self.bn3 = nn.BatchNorm2d(128)
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self.pool = nn.MaxPool2d(2, 2)
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self.dropout = nn.Dropout(0.4)
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self.fc1 = nn.Linear(128 * 16 * 16, 512)
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self.fc2 = nn.Linear(512, num_classes)
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def forward(self, x):
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x = self.pool(F.relu(self.bn1(self.conv1(x))))
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x = self.pool(F.relu(self.bn2(self.conv2(x))))
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x = self.pool(F.relu(self.bn3(self.conv3(x))))
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x = x.view(x.size(0), -1)
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x = F.relu(self.fc1(x))
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x = self.dropout(x)
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x = self.fc2(x)
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return x
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# Load Model
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device = torch.device("cpu")
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num_classes = 3
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model = RiceDiseaseCNN(num_classes)
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model.load_state_dict(torch.load("rice_disease_cnn.pth", map_location=device))
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model.eval()
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# Define Transformations
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transform = transforms.Compose([
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transforms.Resize((128, 128)),
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transforms.ToTensor(),
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transforms.Normalize((0.5,), (0.5,))
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])
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# Class Labels
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class_labels = ["Bacterial Leaf Blight", "Brown Spot", "Leaf Smut"]
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# Streamlit App Configuration
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st.set_page_config(page_title="Rice Disease Detection", layout="wide")
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# Define dataset path after extraction
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dataset_path = DATASET_FOLDER
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# Sidebar Navigation
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st.sidebar.title("Navigation")
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page = st.sidebar.radio("Go to", ["Dataset", "Data Visualization", "Model Metrics", "Classification"])
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# Dataset Page
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if page == "Dataset":
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st.title("Rice Leaf Disease Dataset πΎ")
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st.markdown("""
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This dataset contains images of rice leaves affected by three common diseases:
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- **Bacterial Leaf Blight**: Caused by *Xanthomonas oryzae* bacteria.
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- **Brown Spot**: Caused by *Cochliobolus miyabeanus* fungus.
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- **Leaf Smut**: Caused by *Entyloma oryzae* fungus.
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The dataset is available on [Kaggle](https://www.kaggle.com/datasets/vbookshelf/rice-leaf-diseases).
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""")
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def get_sample_images(label, count=3):
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label_path = os.path.join(dataset_path, label)
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images = [img for img in os.listdir(label_path) if img.endswith(("png", "jpg", "jpeg"))]
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sample_images = random.sample(images, min(count, len(images)))
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return [os.path.join(label_path, img) for img in sample_images]
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st.subheader("Sample Images from Dataset")
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cols = st.columns(3)
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for idx, label in enumerate(class_labels):
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images = get_sample_images(label)
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with cols[idx]:
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st.write(f"### {label}")
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for img_path in images:
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st.image(img_path, use_column_width=True)
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# Data Visualization Page
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elif page == "Data Visualization":
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st.title("Data Visualization π")
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def get_image_count(label):
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label_path = os.path.join(dataset_path, label)
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return len([img for img in os.listdir(label_path) if img.endswith(("png", "jpg", "jpeg"))])
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class_counts = {label: get_image_count(label) for label in class_labels}
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st.subheader("Class Distribution")
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df = pd.DataFrame(list(class_counts.items()), columns=["Disease", "Count"])
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# Pie Chart
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fig, ax = plt.subplots()
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ax.pie(df["Count"], labels=df["Disease"], autopct='%1.1f%%', startangle=90)
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ax.axis('equal')
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st.pyplot(fig)
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# Bar Chart
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fig, ax = plt.subplots()
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ax.bar(df["Disease"], df["Count"], color=['#1f77b4', '#ff7f0e', '#2ca02c'])
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ax.set_xlabel('Disease Type')
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ax.set_ylabel('Number of Images')
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st.pyplot(fig)
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# Model Metrics Page
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elif page == "Model Metrics":
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st.title("Model Performance Metrics π")
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st.markdown("""
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### Model Architecture
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- **Convolutional Layers** with Batch Normalization
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- **MaxPooling** for dimension reduction
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- **Fully Connected Layers** for classification
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""")
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# Confusion Matrix
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st.subheader("Confusion Matrix")
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st.image("con_mat.png", use_column_width=True)
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# Training Curves
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col1, col2 = st.columns(2)
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with col1:
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st.subheader("Training Loss")
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st.image("train_loss.png")
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with col2:
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st.subheader("Validation Accuracy")
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st.image("val_acc.png")
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# Classification Report
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st.subheader("Classification Report")
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st.code("""
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precision recall f1-score support
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Bacterial Leaf Blight 0.90 1.00 0.95 9
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Brown Spot 1.00 1.00 1.00 5
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Leaf Smut 1.00 0.75 0.86 4
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""")
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# Classification Page
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elif page == "Classification":
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st.title("Rice Leaf Disease Classification π")
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uploaded_file = st.file_uploader("Upload rice leaf image", type=["jpg", "png", "jpeg"])
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if uploaded_file:
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image = Image.open(uploaded_file).convert("RGB")
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st.image(image, use_column_width=True)
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# Transform and predict
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image_tensor = transform(image).unsqueeze(0)
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with torch.no_grad():
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output = model(image_tensor)
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_, predicted = torch.max(output, 1)
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st.success(f"**Prediction:** {class_labels[predicted.item()]}")
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con_mat.png
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requirements.txt
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streamlit
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+
torch
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+
torchvision
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| 4 |
+
pandas
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matplotlib
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+
pillow
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rice_disease_cnn.pth
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version https://git-lfs.github.com/spec/v1
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oid sha256:c8f7dc36dd4d5d7ba02214e06cef5d0bf960c26cda6d62e58d5dffe442a90df4
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size 67501584
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train.ipynb
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The diff for this file is too large to render.
See raw diff
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train2.ipynb
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The diff for this file is too large to render.
See raw diff
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train_loss.png
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val_acc.png
ADDED
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