GENE / core /crispr_editor.py
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Create crispr_editor.py
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import random
BASES = ["A", "T", "C", "G"]
def perform_edit(sequence, cut_site):
sequence = list(sequence)
mode = random.choice([
"substitution",
"deletion",
"insertion"
])
if mode == "substitution":
sequence[cut_site] = random.choice(BASES)
elif mode == "deletion":
del sequence[cut_site]
elif mode == "insertion":
sequence.insert(cut_site, random.choice(BASES))
return "".join(sequence)