Ali2206 commited on
Commit
25dd79e
·
1 Parent(s): 69dfbeb

device token

Browse files
Files changed (1) hide show
  1. api/services/synthea_integration.py +24 -6
api/services/synthea_integration.py CHANGED
@@ -85,7 +85,9 @@ class SyntheaIntegrationService:
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  "exporter.fhir.include_observations": "true",
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  "exporter.fhir.include_procedures": "true",
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  "exporter.fhir.include_immunizations": "true",
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- "exporter.fhir.include_allergies": "true"
 
 
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  }
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  async def download_synthea(self) -> bool:
@@ -157,13 +159,20 @@ class SyntheaIntegrationService:
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  for file in self.output_dir.glob("*.json"):
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  file.unlink()
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- # Run Synthea with more robust configuration
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  cmd = [
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  "java", "-jar", str(self.synthea_jar_path),
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- "-c", config_file,
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- "-o", str(self.output_dir.absolute()), # Use absolute path
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- "-p", str(population), # Explicitly set population
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- "--seed", str(int(datetime.now().timestamp())) # Use current timestamp as seed
 
 
 
 
 
 
 
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  ]
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  logger.info(f"Running command: {' '.join(cmd)}")
@@ -213,6 +222,15 @@ class SyntheaIntegrationService:
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  for subdir in subdirs:
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  json_files = list(subdir.glob("*.json"))
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  logger.info(f"📁 JSON files in {subdir.name}: {[f.name for f in json_files]}")
 
 
 
 
 
 
 
 
 
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  else:
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  logger.warning(f"⚠️ Output directory does not exist: {self.output_dir}")
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  "exporter.fhir.include_observations": "true",
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  "exporter.fhir.include_procedures": "true",
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  "exporter.fhir.include_immunizations": "true",
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+ "exporter.fhir.include_allergies": "true",
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+ "exporter.fhir.include_organizations": "false",
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+ "exporter.fhir.include_practitioners": "false"
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  }
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  async def download_synthea(self) -> bool:
 
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  for file in self.output_dir.glob("*.json"):
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  file.unlink()
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+ # Run Synthea with command line arguments (more reliable)
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  cmd = [
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  "java", "-jar", str(self.synthea_jar_path),
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+ "-p", str(population),
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+ "-o", str(self.output_dir.absolute()),
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+ "--seed", str(int(datetime.now().timestamp())),
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+ "--exporter.fhir.transaction_bundle=true",
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+ "--exporter.fhir.include_patient_summary=true",
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+ "--exporter.fhir.include_encounters=true",
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+ "--exporter.fhir.include_medications=true",
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+ "--exporter.fhir.include_conditions=true",
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+ "--exporter.fhir.include_observations=true",
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+ "--exporter.fhir.include_organizations=false",
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+ "--exporter.fhir.include_practitioners=false"
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  ]
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  logger.info(f"Running command: {' '.join(cmd)}")
 
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  for subdir in subdirs:
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  json_files = list(subdir.glob("*.json"))
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  logger.info(f"📁 JSON files in {subdir.name}: {[f.name for f in json_files]}")
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+
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+ # Also check if files were created in the working directory
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+ working_dir_files = list(Path.cwd().glob("*.json"))
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+ logger.info(f"📁 JSON files in current working directory: {[f.name for f in working_dir_files]}")
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+
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+ # Check if files were created in the synthea directory
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+ synthea_dir_files = list(self.synthea_dir.glob("*.json"))
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+ logger.info(f"📁 JSON files in synthea directory: {[f.name for f in synthea_dir_files]}")
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+
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  else:
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  logger.warning(f"⚠️ Output directory does not exist: {self.output_dir}")
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