bio-nexus-api / app /workers /celery_app.py
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Add sequencing pipeline (FASTQ -> QC -> alignment -> variant calling -> report)
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try:
from celery import Celery
from app.config import settings
celery_app = Celery(
"bio_nexus",
broker=settings.CELERY_BROKER_URL,
backend=settings.CELERY_RESULT_BACKEND,
)
celery_app.conf.update(
task_serializer="json",
accept_content=["json"],
result_serializer="json",
timezone="UTC",
enable_utc=True,
task_track_started=True,
task_acks_late=True,
worker_prefetch_multiplier=1,
)
import redis
r = redis.from_url(settings.REDIS_URL)
r.ping()
r.close()
except Exception:
celery_app = None