Spaces:
Sleeping
Sleeping
Siyun He commited on
Commit ·
a1ee05b
1
Parent(s): 2cb8d59
upload
Browse files- .DS_Store +0 -0
- app.py +23 -0
- classification.py +242 -0
- clf_glcm.pkl +3 -0
- clf_lbp.pkl +3 -0
- requirements.txt +7 -0
.DS_Store
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Binary file (18.4 kB). View file
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app.py
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import gradio as gr
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from classification import classify_image
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import pickle
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# Load the pre-trained classifiers
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clf_glcm = pickle.load(open('clf_glcm.pkl', 'rb'))
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clf_lbp = pickle.load(open('clf_lbp.pkl', 'rb'))
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# Create a Gradio interface with a dropdown menu for algorithm selection
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iface = gr.Interface(
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fn=classify_image,
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inputs=[
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gr.Image(type='numpy', label="Upload an Image"),
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gr.Dropdown(choices=['GLCM', 'LBP'], label="Algorithm", value='GLCM')
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],
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outputs='text',
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title='Texture Classification',
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description='Upload an image and choose an algorithm (GLCM or LBP) for texture classification.'
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)
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# Launch the interface
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iface.launch(share=True)
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classification.py
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# save the resized image to ./grass_resized/ folder
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import os
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import cv2
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import numpy as np
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# Resize the image to 128x128
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def resize_image(image_path, save_path):
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img = cv2.imread(image_path)
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img = cv2.resize(img, (128, 128))
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cv2.imwrite(save_path, img)
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# read image data from ./grass/ folder
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if not os.path.exists('./grass_resized/'):
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os.makedirs('./grass_resized/')
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# rename the image file to 1.jpg, 2.jpg, 3.jpg, ...
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count = 1
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for file in os.listdir('./grass/'):
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if file.endswith('.jpg') or file.endswith('.jpeg') or file.endswith('.png'):
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resize_image('./grass/' + file, './grass_resized/' + str(count) + '.jpg')
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count += 1
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print('Done!')
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# save the resized image to ./wood_resized/ folder
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if not os.path.exists('./wood_resized/'):
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os.makedirs('./wood_resized/')
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# rename the image file to 1.jpg, 2.jpg, 3.jpg, ...
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count = 1
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for file in os.listdir('./wood/'):
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if file.endswith('.jpg') or file.endswith('.jpeg') or file.endswith('.png'):
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resize_image('./wood/' + file, './wood_resized/' + str(count) + '.jpg')
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count += 1
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print('Done!')
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# Divide the data into training and testing data: 70% training, 30% testing
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# Merge grass and wood data into training and testing data
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# Save the training data to ./train/ folder
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# Save the testing data to ./test/ folder
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import shutil
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if not os.path.exists('./train/'):
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os.makedirs('./train/')
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if not os.path.exists('./test/'):
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os.makedirs('./test/')
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# Rename files so that they do not overwrite each other
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for i in range(1, 36):
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shutil.copy('./grass_resized/' + str(i) + '.jpg', './train/' + str(i) + '.jpg')
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for i in range(36, 51):
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shutil.copy('./grass_resized/' +
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str(i) + '.jpg', './test/' + str(i - 35) + '.jpg')
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for i in range(1, 36):
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shutil.copy('./wood_resized/' + str(i) + '.jpg', './train/' + str(i + 35) + '.jpg')
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for i in range(36, 51):
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shutil.copy('./wood_resized/' +
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str(i) + '.jpg', './test/' + str(i - 20) + '.jpg')
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# Do data augmentation by flipping the images horizontally on train data
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# Save the augmented data to the same folders
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def augment_image(image_path, save_path):
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img = cv2.imread(image_path)
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#flip with 50% probability
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if np.random.rand() > 0.5:
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img = cv2.flip(img, 1)
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#rotate by 90 degrees with 50% probability
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if np.random.rand() > 0.5:
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img = cv2.rotate(img, cv2.ROTATE_90_CLOCKWISE)
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cv2.imwrite(save_path, img)
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for i in range(1, 36):
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augment_image('./train/' + str(i) + '.jpg', './train/' + str(i + 70) + '.jpg')
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for i in range(36, 51):
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augment_image('./train/' + str(i) + '.jpg', './train/' + str(i + 70) + '.jpg')
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# Compute the GLCM for each image.
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# Extract features like contrast, correlaton, energy, and homogeneity.
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# Save the features to a CSV file.
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# Label each feature vector with the correct class (grass or wood).
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import pandas as pd
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from skimage.feature import graycomatrix, graycoprops
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def compute_glcm(image_path, ispath=True):
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'''Compute GLCM features for an image.'''
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if ispath:
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img = cv2.imread(image_path, cv2.IMREAD_GRAYSCALE)
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else:
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img = image_path
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# compute the GLCM properties. Distance = 2, and 4 angles: 0, 45, 90, 135
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glcm = graycomatrix(img, [3], [0, np.pi/4, np.pi/2, 3*np.pi/4], 256, symmetric=True, normed=True)
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# extract the properties
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contrast = graycoprops(glcm, 'contrast')
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correlation = graycoprops(glcm, 'correlation')
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energy = graycoprops(glcm, 'energy')
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homogeneity = graycoprops(glcm, 'homogeneity')
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# return the feature vector
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# return [contrast[0][0], correlation[0][0], energy[0][0], homogeneity[0][0]]
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# Flatten the arrays first
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contrast_flat = contrast.flatten()
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correlation_flat = correlation.flatten()
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energy_flat = energy.flatten()
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homogeneity_flat = homogeneity.flatten()
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# Calculate the mean for each GLCM feature category
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mean_contrast = np.mean(contrast_flat)
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mean_correlation = np.mean(correlation_flat)
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mean_energy = np.mean(energy_flat)
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mean_homogeneity = np.mean(homogeneity_flat)
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return [mean_contrast, mean_correlation, mean_energy, mean_homogeneity]
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# Compute the GLCM for each image in the training data
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data = []
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for i in range(1, 71):
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data.append(compute_glcm('./train/' + str(i) + '.jpg'))
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df = pd.DataFrame(data, columns=['contrast', 'correlation', 'energy', 'homogeneity'])
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df['class'] = ['grass']*35 + ['wood']*35
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df.to_csv('train_glcm.csv', index=False)
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# Compute the GLCM for each image in the testing data
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data = []
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for i in range(1, 31):
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data.append(compute_glcm('./test/' + str(i) + '.jpg'))
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df = pd.DataFrame(data, columns=['contrast', 'correlation', 'energy', 'homogeneity'])
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df['class'] = ['grass']*15 + ['wood']*15
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df.to_csv('test_glcm.csv', index=False)
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# Apply the LBP operator to each image.
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# Generate histograms of LBP codes to create feature vectors.
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# Save the features to a CSV file.
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# Label each feature vector with the correct class (grass or wood).
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from skimage.feature import local_binary_pattern
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def compute_lbp(image_path, ispath=True):
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if ispath:
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img = cv2.imread(image_path, cv2.IMREAD_GRAYSCALE)
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| 140 |
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else:
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img = image_path
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lbp = local_binary_pattern(img, 8, 1, 'uniform')
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hist, _ = np.histogram(lbp, bins=np.arange(0, 11), density=True)
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return hist
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# Compute the LBP for each image in the training data
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data = []
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for i in range(1, 71):
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data.append(compute_lbp('./train/' + str(i) + '.jpg'))
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df = pd.DataFrame(data, columns=['lbp_' + str(i) for i in range(10)])
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df['class'] = ['grass']*35 + ['wood']*35
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df.to_csv('train_lbp.csv', index=False)
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# Compute the LBP for each image in the testing data
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data = []
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for i in range(1, 31):
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data.append(compute_lbp('./test/' + str(i) + '.jpg'))
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| 158 |
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df = pd.DataFrame(data, columns=['lbp_' + str(i) for i in range(10)])
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| 159 |
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df['class'] = ['grass']*15 + ['wood']*15
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df.to_csv('test_lbp.csv', index=False)
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# Select Support Vector Machines (SVM) as the classifier.
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# Train the classifier using the training data.
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| 164 |
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# Test the classifier using the testing data.
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| 165 |
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from sklearn.svm import SVC
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| 166 |
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from sklearn.metrics import accuracy_score
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| 167 |
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from sklearn.metrics import precision_score
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| 168 |
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import pandas as pd
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| 169 |
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| 170 |
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train_glcm = pd.read_csv('train_glcm.csv')
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| 171 |
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test_glcm = pd.read_csv('test_glcm.csv')
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| 172 |
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train_lbp = pd.read_csv('train_lbp.csv')
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| 173 |
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test_lbp = pd.read_csv('test_lbp.csv')
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| 174 |
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| 175 |
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X_train_glcm = train_glcm.drop('class', axis=1)
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| 176 |
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y_train_glcm = train_glcm['class']
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| 177 |
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X_test_glcm = test_glcm.drop('class', axis=1)
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| 178 |
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y_test_glcm = test_glcm['class']
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| 179 |
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| 180 |
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X_train_lbp = train_lbp.drop('class', axis=1)
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| 181 |
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y_train_lbp = train_lbp['class']
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| 182 |
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X_test_lbp = test_lbp.drop('class', axis=1)
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| 183 |
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y_test_lbp = test_lbp['class']
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| 184 |
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clf_glcm = SVC()
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clf_glcm.fit(X_train_glcm, y_train_glcm)
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| 187 |
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y_pred_glcm = clf_glcm.predict(X_test_glcm)
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| 188 |
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print('Accuracy for GLCM features:', accuracy_score(y_test_glcm, y_pred_glcm))
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| 189 |
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# calculate the precsion
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| 190 |
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precision = precision_score(y_test_glcm, y_pred_glcm, average='weighted')
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| 191 |
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print('Precision for GLCM features:', precision)
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| 192 |
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| 193 |
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clf_lbp = SVC()
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| 194 |
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clf_lbp.fit(X_train_lbp, y_train_lbp)
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| 195 |
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y_pred_lbp = clf_lbp.predict(X_test_lbp)
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| 196 |
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print('Accuracy for LBP features:', accuracy_score(y_test_lbp, y_pred_lbp))
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| 197 |
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# calculate the precsion
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| 198 |
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precision = precision_score(y_test_lbp, y_pred_lbp, average='weighted')
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print('Precision for LBP features:', precision)
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# Evaluate each classifier on the tesing set.
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| 202 |
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# Compare the results.
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| 203 |
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# Save the results to a CSV file.
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| 204 |
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results = pd.DataFrame({'GLCM': [accuracy_score(y_test_glcm, y_pred_glcm)], 'LBP': [accuracy_score(y_test_lbp, y_pred_lbp)]})
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| 205 |
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# Add the precision to the results
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| 206 |
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results['GLCM_precision'] = precision_score(y_test_glcm, y_pred_glcm, average='weighted')
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| 207 |
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results['LBP_precision'] = precision_score(y_test_lbp, y_pred_lbp, average='weighted')
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| 208 |
+
results.to_csv('results.csv', index=False)
|
| 209 |
+
|
| 210 |
+
import pickle
|
| 211 |
+
# save clf_glcm and clf_lbp as pickle files
|
| 212 |
+
with open('clf_glcm.pkl', 'wb') as f:
|
| 213 |
+
pickle.dump(clf_glcm, f)
|
| 214 |
+
with open('clf_lbp.pkl', 'wb') as f:
|
| 215 |
+
pickle.dump(clf_lbp, f)
|
| 216 |
+
|
| 217 |
+
import warnings
|
| 218 |
+
def classify_image(image, algorithm):
|
| 219 |
+
# Suppress the warning about feature names
|
| 220 |
+
warnings.filterwarnings("ignore", message="X does not have valid feature names")
|
| 221 |
+
|
| 222 |
+
# If the image is a NumPy array, it's already loaded
|
| 223 |
+
if isinstance(image, np.ndarray):
|
| 224 |
+
img = cv2.resize(image, (128, 128))
|
| 225 |
+
img_gray = cv2.cvtColor(img, cv2.COLOR_BGR2GRAY)
|
| 226 |
+
|
| 227 |
+
# Perform classification based on the selected algorithm
|
| 228 |
+
if algorithm == 'GLCM':
|
| 229 |
+
features = compute_glcm(img_gray, ispath=False)
|
| 230 |
+
else:
|
| 231 |
+
features = compute_lbp(img_gray, ispath=False)
|
| 232 |
+
|
| 233 |
+
# Convert features to a DataFrame to match the format used in training
|
| 234 |
+
features_df = pd.DataFrame([features])
|
| 235 |
+
|
| 236 |
+
# Make predictions using the pre-trained classifiers
|
| 237 |
+
if algorithm == 'GLCM':
|
| 238 |
+
prediction = clf_glcm.predict(features_df)[0]
|
| 239 |
+
else:
|
| 240 |
+
prediction = clf_lbp.predict(features_df)[0]
|
| 241 |
+
|
| 242 |
+
return prediction
|
clf_glcm.pkl
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:dae47a92e34746a8ada666bda3481e425b71b3cfc38fadb9bebdbb736bd7e8f5
|
| 3 |
+
size 1838
|
clf_lbp.pkl
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:2cf77958648f5267635cdda0bb7b5d82b84443a7e9abc8b8dd421faa96d8b0e7
|
| 3 |
+
size 3250
|
requirements.txt
ADDED
|
@@ -0,0 +1,7 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
opencv-python
|
| 2 |
+
pandas
|
| 3 |
+
matplotlib
|
| 4 |
+
seaborn
|
| 5 |
+
numpy
|
| 6 |
+
scikit-image
|
| 7 |
+
gradio
|