# smartheal_ai_processor.py
# Preserves ALL original class/function names.
# Changes:
#  - Adds segment_wound(image) with your logic (+ KMeans fallback)
#  - perform_visual_analysis() now calls segment_wound() for mask
#  - Safe overlay (no mask kwarg in addWeighted)
#  - Conditional @spaces.GPU to avoid cudaGetDeviceCount crash

import os
import time
import logging
from datetime import datetime
from typing import Optional, Dict, List, Tuple

# Quiet HF tokenizers fork warning
os.environ.setdefault("TOKENIZERS_PARALLELISM", "false")

import cv2
import numpy as np
from PIL import Image
from PIL.ExifTags import TAGS

logging.basicConfig(level=logging.INFO, format="%(asctime)s - %(levelname)s - %(message)s")

UPLOADS_DIR = "uploads"
os.makedirs(UPLOADS_DIR, exist_ok=True)

HF_TOKEN = os.getenv("HF_TOKEN", None)
YOLO_MODEL_PATH = "src/best.pt"
SEG_MODEL_PATH = "src/segmentation_model.h5"   # optional
GUIDELINE_PDFS = ["src/eHealth in Wound Care.pdf", "src/IWGDF Guideline.pdf", "src/evaluation.pdf"]
DATASET_ID = "SmartHeal/wound-image-uploads"
DEFAULT_PX_PER_CM = 38.0
PX_PER_CM_MIN, PX_PER_CM_MAX = 5.0, 1200.0

models_cache: Dict[str, object] = {}
knowledge_base_cache: Dict[str, object] = {}

# ---------- Lazy imports ----------
def _import_ultralytics():
    from ultralytics import YOLO
    return YOLO

def _import_tf_loader():
    import tensorflow as tf
    tf.config.set_visible_devices([], "GPU")  # force TF CPU
    from tensorflow.keras.models import load_model
    return load_model

def _import_hf_cls():
    from transformers import pipeline
    return pipeline

def _import_embeddings():
    from langchain_community.embeddings import HuggingFaceEmbeddings
    return HuggingFaceEmbeddings

def _import_langchain_pdf():
    from langchain_community.document_loaders import PyPDFLoader
    return PyPDFLoader

def _import_langchain_faiss():
    from langchain_community.vectorstores import FAISS
    return FAISS

def _import_hf_hub():
    from huggingface_hub import HfApi, HfFolder
    return HfApi, HfFolder

# ---------- Conditional Spaces GPU wrapper ----------
def _cuda_available() -> bool:
    try:
        import torch
        return bool(getattr(torch, "cuda", None)) and torch.cuda.is_available()
    except Exception:
        return False

def _generate_medgemma_report_core(
    patient_info: str,
    visual_results: Dict,
    guideline_context: str,
    image_pil: Image.Image,
    max_new_tokens: Optional[int] = None,
) -> str:
    try:
        from transformers import pipeline
        pipe = pipeline(
            "image-text-to-text",
            model="google/medgemma-4b-it",
            device_map="auto" if _cuda_available() else None,
            token=HF_TOKEN,
            model_kwargs={"low_cpu_mem_usage": True, "use_cache": True},
        )

        prompt = (
            "You are a medical AI assistant. Analyze this wound image and patient data.\n\n"
            f"Patient: {patient_info}\n"
            f"Wound: {visual_results.get('wound_type', 'Unknown')} - "
            f"{visual_results.get('length_cm', 0)}×{visual_results.get('breadth_cm', 0)} cm\n\n"
            "Provide a structured report with:\n"
            "1. Clinical Summary\n2. Treatment Recommendations\n3. Risk Assessment\n4. Monitoring Plan\n"
        )

        messages = [{"role": "user", "content": [
            {"type": "image", "image": image_pil},
            {"type": "text",  "text": prompt},
        ]}]

        t0 = time.time()
        out = pipe(
            text=messages,
            max_new_tokens=max_new_tokens or 800,
            do_sample=False,
            temperature=0.7,
        )
        logging.info(f"✅ MedGemma finished in {time.time()-t0:.2f}s")

        if out and len(out) > 0:
            try:
                return out[0]["generated_text"][-1].get("content", "").strip() or "⚠️ Empty response"
            except Exception:
                return (out[0].get("generated_text", "") or "").strip() or "⚠️ Empty response"
        return "⚠️ No output generated"
    except Exception as e:
        logging.error(f"❌ MedGemma generation error: {e}")
        return "⚠️ GPU/LLM worker unavailable"

try:
    import spaces
    if _cuda_available():
        @spaces.GPU(enable_queue=True, duration=90)
        def generate_medgemma_report(
            patient_info: str,
            visual_results: Dict,
            guideline_context: str,
            image_pil: Image.Image,
            max_new_tokens: Optional[int] = None,
        ) -> str:
            return _generate_medgemma_report_core(patient_info, visual_results, guideline_context, image_pil, max_new_tokens)
    else:
        def generate_medgemma_report(
            patient_info: str,
            visual_results: Dict,
            guideline_context: str,
            image_pil: Image.Image,
            max_new_tokens: Optional[int] = None,
        ) -> str:
            return _generate_medgemma_report_core(patient_info, visual_results, guideline_context, image_pil, max_new_tokens)
except Exception:
    def generate_medgemma_report(
        patient_info: str,
        visual_results: Dict,
        guideline_context: str,
        image_pil: Image.Image,
        max_new_tokens: Optional[int] = None,
    ) -> str:
        return _generate_medgemma_report_core(patient_info, visual_results, guideline_context, image_pil, max_new_tokens)

# ---------- Initialize CPU models ----------
def load_yolo_model():
    YOLO = _import_ultralytics()
    return YOLO(YOLO_MODEL_PATH)

def load_segmentation_model():
    load_model = _import_tf_loader()
    return load_model(SEG_MODEL_PATH, compile=False)

def load_classification_pipeline():
    pipe = _import_hf_cls()
    return pipe("image-classification", model="Hemg/Wound-classification", token=HF_TOKEN, device="cpu")

def load_embedding_model():
    Emb = _import_embeddings()
    return Emb(model_name="sentence-transformers/all-MiniLM-L6-v2", model_kwargs={"device": "cpu"})

def initialize_cpu_models() -> None:
    if HF_TOKEN:
        try:
            HfApi, HfFolder = _import_hf_hub()
            HfFolder.save_token(HF_TOKEN)
            logging.info("✅ HF token set")
        except Exception as e:
            logging.warning(f"HF token save failed: {e}")

    if "det" not in models_cache:
        try:
            models_cache["det"] = load_yolo_model()
            logging.info("✅ YOLO loaded (CPU)")
        except Exception as e:
            logging.error(f"YOLO load failed: {e}")

    if "seg" not in models_cache:
        try:
            if os.path.exists(SEG_MODEL_PATH):
                models_cache["seg"] = load_segmentation_model()
                logging.info("✅ Segmentation model loaded (CPU)")
            else:
                models_cache["seg"] = None
                logging.warning("Segmentation model file missing; skipping.")
        except Exception as e:
            models_cache["seg"] = None
            logging.warning(f"Segmentation unavailable: {e}")

    if "cls" not in models_cache:
        try:
            models_cache["cls"] = load_classification_pipeline()
            logging.info("✅ Classifier loaded (CPU)")
        except Exception as e:
            models_cache["cls"] = None
            logging.warning(f"Classifier unavailable: {e}")

    if "embedding_model" not in models_cache:
        try:
            models_cache["embedding_model"] = load_embedding_model()
            logging.info("✅ Embeddings loaded (CPU)")
        except Exception as e:
            models_cache["embedding_model"] = None
            logging.warning(f"Embeddings unavailable: {e}")

def setup_knowledge_base() -> None:
    if "vector_store" in knowledge_base_cache:
        return
    docs: List = []
    try:
        PyPDFLoader = _import_langchain_pdf()
        for pdf in GUIDELINE_PDFS:
            if os.path.exists(pdf):
                try:
                    docs.extend(PyPDFLoader(pdf).load())
                    logging.info(f"Loaded PDF: {pdf}")
                except Exception as e:
                    logging.warning(f"PDF load failed ({pdf}): {e}")
    except Exception as e:
        logging.warning(f"LangChain PDF loader unavailable: {e}")

    if docs and models_cache.get("embedding_model"):
        try:
            from langchain.text_splitter import RecursiveCharacterTextSplitter
            FAISS = _import_langchain_faiss()
            chunks = RecursiveCharacterTextSplitter(chunk_size=1000, chunk_overlap=100).split_documents(docs)
            knowledge_base_cache["vector_store"] = FAISS.from_documents(chunks, models_cache["embedding_model"])
            logging.info(f"✅ Knowledge base ready ({len(chunks)} chunks)")
        except Exception as e:
            knowledge_base_cache["vector_store"] = None
            logging.warning(f"KB build failed: {e}")
    else:
        knowledge_base_cache["vector_store"] = None
        logging.warning("KB disabled (no docs or embeddings).")

initialize_cpu_models()
setup_knowledge_base()

# ---------- Calibration helpers ----------
def _exif_to_dict(pil_img: Image.Image) -> Dict[str, object]:
    out = {}
    try:
        exif = pil_img.getexif()
        if not exif:
            return out
        for k, v in exif.items():
            tag = TAGS.get(k, k)
            out[tag] = v
    except Exception:
        pass
    return out

def _to_float(val) -> Optional[float]:
    try:
        if val is None:
            return None
        if isinstance(val, tuple) and len(val) == 2:
            num, den = float(val[0]), float(val[1]) if float(val[1]) != 0 else 1.0
            return num / den
        return float(val)
    except Exception:
        return None

def _estimate_sensor_width_mm(f_mm: Optional[float], f35: Optional[float]) -> Optional[float]:
    if f_mm and f35 and f35 > 0:
        return 36.0 * f_mm / f35
    return None

def estimate_px_per_cm_from_exif(pil_img: Image.Image, default_px_per_cm: float = DEFAULT_PX_PER_CM) -> Tuple[float, Dict]:
    meta = {"used": "default", "f_mm": None, "f35": None, "sensor_w_mm": None, "distance_m": None}
    try:
        exif = _exif_to_dict(pil_img)
        f_mm = _to_float(exif.get("FocalLength"))
        f35 = _to_float(exif.get("FocalLengthIn35mmFilm") or exif.get("FocalLengthIn35mm"))
        subj_dist_m = _to_float(exif.get("SubjectDistance"))
        sensor_w_mm = _estimate_sensor_width_mm(f_mm, f35)
        meta.update({"f_mm": f_mm, "f35": f35, "sensor_w_mm": sensor_w_mm, "distance_m": subj_dist_m})

        if f_mm and sensor_w_mm and subj_dist_m and subj_dist_m > 0:
            w_px = pil_img.width
            field_w_mm = sensor_w_mm * (subj_dist_m * 1000.0) / f_mm
            field_w_cm = field_w_mm / 10.0
            px_per_cm = w_px / max(field_w_cm, 1e-6)
            px_per_cm = float(np.clip(px_per_cm, PX_PER_CM_MIN, PX_PER_CM_MAX))
            meta["used"] = "exif"
            return px_per_cm, meta
        return float(default_px_per_cm), meta
    except Exception:
        return float(default_px_per_cm), meta

# ---------- Your requested segmentation logic ----------
def segment_wound(image: np.ndarray) -> np.ndarray:
    """
    Segments wound from a preprocessed ROI image, with a fallback to KMeans if the model fails.
    Returns a mask in 0..255 (uint8), same HxW as input image.
    """
    segmentation_model = models_cache.get("seg", None)

    if segmentation_model is not None:
        try:
            input_size = getattr(segmentation_model, "input_shape", None)
            if input_size is None or len(input_size) < 3:
                raise ValueError(f"Bad seg input_shape: {input_size}")
            H, W = int(input_size[1]), int(input_size[2])  # (None,H,W,C)

            resized = cv2.resize(image, (W, H))                    # cv2 takes (W,H)
            norm = np.expand_dims(resized / 255.0, axis=0)         # (1,H,W,3)
            prediction = segmentation_model.predict(norm, verbose=0)

            # Handle models with multiple outputs
            if isinstance(prediction, list):
                prediction = prediction[0]
            # squeeze batch dim if present
            prediction = prediction[0] if prediction.ndim >= 3 else prediction

            # prediction can be (H,W,1) or (H,W)
            pred2d = prediction.squeeze()
            mask_prob = cv2.resize(pred2d, (image.shape[1], image.shape[0]))  # back to ROI size
            mask = (mask_prob >= 0.5).astype(np.uint8) * 255
            if mask.max() == 0:
                logging.info("Seg model returned empty mask at 0.5 — keeping as-is (KMeans fallback will handle if needed).")
            return mask.astype(np.uint8)
        except Exception as e:
            logging.warning(f"⚠️ Segmentation model prediction failed: {e}. Falling back to KMeans.")

    # --- Fallback: color clustering (KMeans, k=2) ---
    Z = image.reshape((-1, 3)).astype(np.float32)
    criteria = (cv2.TERM_CRITERIA_EPS + cv2.TERM_CRITERIA_MAX_ITER, 10, 1.0)
    _K = 2
    _, labels, centers = cv2.kmeans(Z, _K, None, criteria, 5, cv2.KMEANS_PP_CENTERS)
    centers = centers.astype(np.uint8).reshape(1, _K, 3)
    centers_lab = cv2.cvtColor(centers, cv2.COLOR_BGR2LAB)[0]
    wound_idx = int(np.argmax(centers_lab[:, 1]))  # reddest cluster (a* channel)
    mask = (labels.reshape(image.shape[:2]) == wound_idx).astype(np.uint8) * 255
    return mask.astype(np.uint8)

# ---------- Measurement + overlay helpers ----------
def largest_component_mask(binary01: np.ndarray, min_area_px: int = 50) -> np.ndarray:
    num, labels, stats, _ = cv2.connectedComponentsWithStats(binary01.astype(np.uint8), connectivity=8)
    if num <= 1:
        return binary01.astype(np.uint8)
    areas = stats[1:, cv2.CC_STAT_AREA]
    if areas.size == 0 or areas.max() < min_area_px:
        return binary01.astype(np.uint8)
    largest_idx = 1 + int(np.argmax(areas))
    return (labels == largest_idx).astype(np.uint8)

def measure_min_area_rect(mask01: np.ndarray, px_per_cm: float) -> Tuple[float, float, Tuple]:
    contours, _ = cv2.findContours(mask01.astype(np.uint8), cv2.RETR_EXTERNAL, cv2.CHAIN_APPROX_SIMPLE)
    if not contours:
        return 0.0, 0.0, (None, None)
    cnt = max(contours, key=cv2.contourArea)
    rect = cv2.minAreaRect(cnt)
    (w_px, h_px) = rect[1]
    length_px, breadth_px = (max(w_px, h_px), min(w_px, h_px))
    length_cm = round(length_px / max(px_per_cm, 1e-6), 2)
    breadth_cm = round(breadth_px / max(px_per_cm, 1e-6), 2)
    box = cv2.boxPoints(rect).astype(int)
    return length_cm, breadth_cm, (box, rect[0])

def count_area_cm2(mask01: np.ndarray, px_per_cm: float) -> float:
    px_count = float(mask01.astype(bool).sum())
    return round(px_count / (max(px_per_cm, 1e-6) ** 2), 2)

def draw_measurement_overlay(
    base_bgr: np.ndarray,
    mask01: np.ndarray,
    rect_box: np.ndarray,
    length_cm: float,
    breadth_cm: float,
    thickness: int = 2
) -> np.ndarray:
    overlay = base_bgr.copy()
    red = np.zeros_like(overlay); red[:] = (0, 0, 255)
    blended = cv2.addWeighted(overlay, 1.0, red, 0.3, 0)
    m3 = np.dstack([mask01 * 255] * 3).astype("uint8")
    overlay = cv2.add(cv2.bitwise_and(overlay, cv2.bitwise_not(m3)),
                      cv2.bitwise_and(blended, m3))

    if rect_box is not None:
        cv2.polylines(overlay, [rect_box], True, (255, 255, 255), thickness)

        pts = rect_box.reshape(-1, 2)
        def midpoint(a, b): return ((a[0] + b[0]) // 2, (a[1] + b[1]) // 2)
        mids = [midpoint(pts[i], pts[(i+1) % 4]) for i in range(4)]
        e_lens = [np.linalg.norm(pts[i] - pts[(i+1) % 4]) for i in range(4)]
        long_pair = (0, 2) if e_lens[0] + e_lens[2] >= e_lens[1] + e_lens[3] else (1, 3)
        short_pair = (1, 3) if long_pair == (0, 2) else (0, 2)

        def draw_arrow(img, p1, p2):
            cv2.arrowedLine(img, p1, p2, (0, 0, 0), thickness + 2, tipLength=0.05)
            cv2.arrowedLine(img, p2, p1, (0, 0, 0), thickness + 2, tipLength=0.05)
            cv2.arrowedLine(img, p1, p2, (255, 255, 255), thickness, tipLength=0.05)
            cv2.arrowedLine(img, p2, p1, (255, 255, 255), thickness, tipLength=0.05)

        def put_label(text, org):
            cv2.putText(overlay, text, (org[0] + 4, org[1] - 4),
                        cv2.FONT_HERSHEY_SIMPLEX, 0.7, (0, 0, 0), 4, cv2.LINE_AA)
            cv2.putText(overlay, text, (org[0] + 4, org[1] - 4),
                        cv2.FONT_HERSHEY_SIMPLEX, 0.7, (255, 255, 255), 2, cv2.LINE_AA)

        draw_arrow(overlay, mids[long_pair[0]], mids[long_pair[1]])
        draw_arrow(overlay, mids[short_pair[0]], mids[short_pair[1]])
        put_label(f"{length_cm:.2f} cm", mids[long_pair[0]])
        put_label(f"{breadth_cm:.2f} cm", mids[short_pair[0]])
    return overlay

# ---------- AI PROCESSOR ----------
class AIProcessor:
    def __init__(self):
        self.models_cache = models_cache
        self.knowledge_base_cache = knowledge_base_cache
        self.uploads_dir = UPLOADS_DIR
        self.dataset_id = DATASET_ID
        self.hf_token = HF_TOKEN

    def _ensure_analysis_dir(self) -> str:
        out_dir = os.path.join(self.uploads_dir, "analysis")
        os.makedirs(out_dir, exist_ok=True)
        return out_dir

    def perform_visual_analysis(self, image_pil: Image.Image) -> Dict:
        """
        YOLO detect → crop ROI → segment_wound(ROI) → largest component →
        minAreaRect measurement (cm) using EXIF px/cm → save outputs.
        """
        try:
            px_per_cm, exif_meta = estimate_px_per_cm_from_exif(image_pil, DEFAULT_PX_PER_CM)
            image_cv = cv2.cvtColor(np.array(image_pil.convert("RGB")), cv2.COLOR_RGB2BGR)

            # --- Detection ---
            det_model = self.models_cache.get("det")
            if det_model is None:
                raise RuntimeError("YOLO model not loaded")
            results = det_model.predict(image_cv, verbose=False, device="cpu")
            if not results or not getattr(results[0], "boxes", None) or len(results[0].boxes) == 0:
                import gradio as gr
                raise gr.Error("No wound could be detected.")

            box = results[0].boxes[0].xyxy[0].cpu().numpy().astype(int)
            x1, y1, x2, y2 = [int(v) for v in box]
            x1, y1 = max(0, x1), max(0, y1)
            x2, y2 = min(image_cv.shape[1], x2), min(image_cv.shape[0], y2)
            roi = image_cv[y1:y2, x1:x2].copy()
            if roi.size == 0:
                import gradio as gr
                raise gr.Error("Detected ROI is empty.")

            # --- Segmentation (your logic + fallback) ---
            mask_u8_255 = segment_wound(roi)               # 0..255
            # Clean up & keep largest component (in 0/1)
            mask01 = (mask_u8_255 > 127).astype(np.uint8)
            mask01 = cv2.morphologyEx(mask01, cv2.MORPH_OPEN, np.ones((3,3), np.uint8), iterations=1)
            mask01 = cv2.morphologyEx(mask01, cv2.MORPH_CLOSE, np.ones((3,3), np.uint8), iterations=1)
            mask01 = largest_component_mask(mask01, min_area_px=30)

            # --- Measurement ---
            if mask01.any():
                length_cm, breadth_cm, (box_pts, _) = measure_min_area_rect(mask01, px_per_cm)
                surface_area_cm2 = count_area_cm2(mask01, px_per_cm)
                anno_roi = draw_measurement_overlay(roi, mask01, box_pts, length_cm, breadth_cm)
            else:
                # fallback to detection box
                h_px = max(0, y2 - y1); w_px = max(0, x2 - x1)
                length_cm = round(h_px / px_per_cm, 2)
                breadth_cm = round(w_px / px_per_cm, 2)
                surface_area_cm2 = round((h_px * w_px) / (px_per_cm ** 2), 2)
                anno_roi = roi.copy()

            # --- Save visualizations ---
            out_dir = self._ensure_analysis_dir()
            ts = datetime.now().strftime("%Y%m%d_%H%M%S")

            original_path = os.path.join(out_dir, f"original_{ts}.png")
            cv2.imwrite(original_path, image_cv)

            det_vis = image_cv.copy()
            cv2.rectangle(det_vis, (x1, y1), (x2, y2), (0, 255, 0), 2)
            detection_path = os.path.join(out_dir, f"detection_{ts}.png")
            cv2.imwrite(detection_path, det_vis)

            segmentation_path = None
            annotated_seg_path = None
            if mask01.any():
                seg_full = image_cv.copy()
                # safe masked blend (no mask kwarg)
                red = np.zeros_like(roi); red[:] = (0, 0, 255)
                blended = cv2.addWeighted(roi, 1.0, red, 0.3, 0)
                m3 = np.dstack([mask01 * 255] * 3).astype("uint8")
                roi_overlay = cv2.add(cv2.bitwise_and(roi, cv2.bitwise_not(m3)),
                                      cv2.bitwise_and(blended, m3))
                seg_full[y1:y2, x1:x2] = roi_overlay
                segmentation_path = os.path.join(out_dir, f"segmentation_{ts}.png")
                cv2.imwrite(segmentation_path, seg_full)

                anno_full = image_cv.copy()
                anno_full[y1:y2, x1:x2] = anno_roi
                annotated_seg_path = os.path.join(out_dir, f"segmentation_annotated_{ts}.png")
                cv2.imwrite(annotated_seg_path, anno_full)

            # --- Optional classification ---
            wound_type = "Unknown"
            cls_pipe = self.models_cache.get("cls")
            if cls_pipe is not None:
                try:
                    preds = cls_pipe(Image.fromarray(cv2.cvtColor(roi, cv2.COLOR_BGR2RGB)))
                    if preds:
                        wound_type = max(preds, key=lambda x: x.get("score", 0)).get("label", "Unknown")
                except Exception as e:
                    logging.warning(f"Classification failed: {e}")

            return {
                "wound_type": wound_type,
                "length_cm": length_cm,
                "breadth_cm": breadth_cm,
                "surface_area_cm2": surface_area_cm2,
                "px_per_cm": round(px_per_cm, 2),
                "calibration_meta": exif_meta,
                "detection_confidence": float(results[0].boxes.conf[0].cpu().item())
                    if getattr(results[0].boxes, "conf", None) is not None else 0.0,
                "detection_image_path": detection_path,
                "segmentation_image_path": segmentation_path,
                "segmentation_annotated_path": annotated_seg_path,
                "original_image_path": original_path,
            }
        except Exception as e:
            logging.error(f"Visual analysis failed: {e}", exc_info=True)
            raise

    # ---------- Knowledge base + reporting (unchanged names) ----------
    def query_guidelines(self, query: str) -> str:
        try:
            vs = self.knowledge_base_cache.get("vector_store")
            if not vs:
                return "Knowledge base is not available."
            try:
                retriever = vs.as_retriever(search_kwargs={"k": 5})
                docs = retriever.get_relevant_documents(query)
            except Exception:
                retriever = vs.as_retriever(search_kwargs={"k": 5})
                docs = retriever.invoke(query)
            lines: List[str] = []
            for d in docs:
                src = (d.metadata or {}).get("source", "N/A")
                txt = (d.page_content or "")[:300]
                lines.append(f"Source: {src}\nContent: {txt}...")
            return "\n\n".join(lines) if lines else "No relevant guideline snippets found."
        except Exception as e:
            logging.warning(f"Guidelines query failed: {e}")
            return f"Guidelines query failed: {str(e)}"

    def _generate_fallback_report(self, patient_info: str, visual_results: Dict, guideline_context: str) -> str:
        return f"""# 🩺 SmartHeal AI - Comprehensive Wound Analysis Report

## 📋 Patient Information
{patient_info}

## 🔍 Visual Analysis Results
- **Wound Type**: {visual_results.get('wound_type', 'Unknown')}
- **Dimensions**: {visual_results.get('length_cm', 0)} cm × {visual_results.get('breadth_cm', 0)} cm
- **Surface Area**: {visual_results.get('surface_area_cm2', 0)} cm²
- **Detection Confidence**: {visual_results.get('detection_confidence', 0):.1%}
- **Calibration**: {visual_results.get('px_per_cm','?')} px/cm ({(visual_results.get('calibration_meta') or {}).get('used','default')})

## 📊 Analysis Images
- **Original**: {visual_results.get('original_image_path', 'N/A')}
- **Detection**: {visual_results.get('detection_image_path', 'N/A')}
- **Segmentation**: {visual_results.get('segmentation_image_path', 'N/A')}
- **Annotated**: {visual_results.get('segmentation_annotated_path', 'N/A')}

## 🎯 Clinical Summary
Automated analysis provides quantitative measurements; verify via clinical examination.

## 💊 Recommendations
- Cleanse wound gently; select dressing per exudate/infection risk
- Debride necrotic tissue if indicated (clinical decision)
- Document with serial photos and measurements

## 📅 Monitoring
- Daily in week 1, then every 2–3 days (or as indicated)
- Weekly progress review

## 📚 Guideline Context
{(guideline_context or '')[:800]}{"..." if guideline_context and len(guideline_context) > 800 else ''}

**Disclaimer:** Automated, for decision support only. Verify clinically.
"""

    def generate_final_report(
        self,
        patient_info: str,
        visual_results: Dict,
        guideline_context: str,
        image_pil: Image.Image,
        max_new_tokens: Optional[int] = None,
    ) -> str:
        try:
            report = generate_medgemma_report(
                patient_info, visual_results, guideline_context, image_pil, max_new_tokens
            )
            if report and report.strip() and not report.startswith(("⚠️", "❌")):
                return report
            logging.warning("MedGemma unavailable/invalid; using fallback.")
            return self._generate_fallback_report(patient_info, visual_results, guideline_context)
        except Exception as e:
            logging.error(f"Report generation failed: {e}")
            return self._generate_fallback_report(patient_info, visual_results, guideline_context)

    def save_and_commit_image(self, image_pil: Image.Image) -> str:
        try:
            os.makedirs(self.uploads_dir, exist_ok=True)
            ts = datetime.now().strftime("%Y%m%d_%H%M%S")
            filename = f"{ts}.png"
            path = os.path.join(self.uploads_dir, filename)
            image_pil.convert("RGB").save(path)
            logging.info(f"✅ Image saved locally: {path}")

            if HF_TOKEN and DATASET_ID:
                try:
                    HfApi, HfFolder = _import_hf_hub()
                    HfFolder.save_token(HF_TOKEN)
                    api = HfApi()
                    api.upload_file(
                        path_or_fileobj=path,
                        path_in_repo=f"images/{filename}",
                        repo_id=DATASET_ID,
                        repo_type="dataset",
                        token=HF_TOKEN,
                        commit_message=f"Upload wound image: {filename}",
                    )
                    logging.info("✅ Image committed to HF dataset")
                except Exception as e:
                    logging.warning(f"HF upload failed: {e}")

            return path
        except Exception as e:
            logging.error(f"Failed to save/commit image: {e}")
            return ""

    def full_analysis_pipeline(self, image_pil: Image.Image, questionnaire_data: Dict) -> Dict:
        try:
            saved_path = self.save_and_commit_image(image_pil)
            visual_results = self.perform_visual_analysis(image_pil)

            pi = questionnaire_data or {}
            patient_info = (
                f"Age: {pi.get('age','N/A')}, "
                f"Diabetic: {pi.get('diabetic','N/A')}, "
                f"Allergies: {pi.get('allergies','N/A')}, "
                f"Date of Wound: {pi.get('date_of_injury','N/A')}, "
                f"Professional Care: {pi.get('professional_care','N/A')}, "
                f"Oozing/Bleeding: {pi.get('oozing_bleeding','N/A')}, "
                f"Infection: {pi.get('infection','N/A')}, "
                f"Moisture: {pi.get('moisture','N/A')}"
            )

            query = (
                f"best practices for managing a {visual_results.get('wound_type','Unknown')} "
                f"with moisture '{pi.get('moisture','unknown')}' and infection '{pi.get('infection','unknown')}' "
                f"in a diabetic status '{pi.get('diabetic','unknown')}'"
            )
            guideline_context = self.query_guidelines(query)

            report = self.generate_final_report(patient_info, visual_results, guideline_context, image_pil)

            return {
                "success": True,
                "visual_analysis": visual_results,
                "report": report,
                "saved_image_path": saved_path,
                "guideline_context": (guideline_context or "")[:500] + (
                    "..." if guideline_context and len(guideline_context) > 500 else ""
                ),
            }
        except Exception as e:
            logging.error(f"Pipeline error: {e}")
            return {
                "success": False,
                "error": str(e),
                "visual_analysis": {},
                "report": f"Analysis failed: {str(e)}",
                "saved_image_path": None,
                "guideline_context": "",
            }

    def analyze_wound(self, image, questionnaire_data: Dict) -> Dict:
        try:
            if isinstance(image, str):
                if not os.path.exists(image):
                    raise ValueError(f"Image file not found: {image}")
                image_pil = Image.open(image)
            elif isinstance(image, Image.Image):
                image_pil = image
            elif isinstance(image, np.ndarray):
                image_pil = Image.fromarray(image)
            else:
                raise ValueError(f"Unsupported image type: {type(image)}")

            return self.full_analysis_pipeline(image_pil, questionnaire_data or {})
        except Exception as e:
            logging.error(f"Wound analysis error: {e}")
            return {
                "success": False,
                "error": str(e),
                "visual_analysis": {},
                "report": f"Analysis initialization failed: {str(e)}",
                "saved_image_path": None,
                "guideline_context": "",
            }