Spaces:
Sleeping
Sleeping
File size: 17,844 Bytes
c4f5f25 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 | """
Distributed tracing integration for MediGuard AI.
Uses OpenTelemetry for end-to-end request tracing.
"""
import json
import logging
import os
import time
from contextlib import asynccontextmanager
from typing import Any
from opentelemetry import baggage, context, trace
from opentelemetry.exporter.jaeger.thrift import JaegerExporter
from opentelemetry.exporter.otlp.proto.grpc.trace_exporter import OTLPSpanExporter
from opentelemetry.instrumentation.fastapi import FastAPIInstrumentor
from opentelemetry.instrumentation.httpx import HTTPXClientInstrumentor
from opentelemetry.instrumentation.redis import RedisInstrumentor
from opentelemetry.instrumentation.sqlalchemy import SQLAlchemyInstrumentor
from opentelemetry.propagate import set_global_textmap
from opentelemetry.sdk.trace import TracerProvider
from opentelemetry.sdk.trace.export import BatchSpanProcessor
from opentelemetry.semconv.trace import SpanAttributes
from opentelemetry.trace import SpanKind, Status, StatusCode
from src.settings import get_settings
logger = logging.getLogger(__name__)
class DistributedTracer:
"""Manages distributed tracing configuration and operations."""
def __init__(self):
self.tracer_provider: TracerProvider | None = None
self.is_initialized = False
self.service_name = "mediguard-api"
self.service_version = "2.0.0"
def initialize(self):
"""Initialize OpenTelemetry tracing."""
if self.is_initialized:
return
settings = get_settings()
# Set up tracer provider
self.tracer_provider = TracerProvider()
trace.set_tracer_provider(self.tracer_provider)
# Configure exporters based on environment
exporters = []
# Jaeger exporter
if os.getenv("JAEGER_ENDPOINT"):
jaeger_exporter = JaegerExporter(
endpoint=os.getenv("JAEGER_ENDPOINT"),
collector_endpoint=os.getenv("JAEGER_COLLECTOR_ENDPOINT"),
agent_host_name=os.getenv("JAEGER_AGENT_HOST", "localhost"),
agent_port=int(os.getenv("JAEGER_AGENT_PORT", "6831")),
)
exporters.append(jaeger_exporter)
logger.info("Jaeger tracing enabled")
# OTLP exporter (for services like Tempo, Honeycomb, etc.)
if os.getenv("OTEL_EXPORTER_OTLP_ENDPOINT"):
otlp_exporter = OTLPSpanExporter(
endpoint=os.getenv("OTEL_EXPORTER_OTLP_ENDPOINT"),
headers=json.loads(os.getenv("OTEL_EXPORTER_OTLP_HEADERS", "{}")),
)
exporters.append(otlp_exporter)
logger.info("OTLP tracing enabled")
# Add processors for each exporter
for exporter in exporters:
processor = BatchSpanProcessor(exporter)
self.tracer_provider.add_span_processor(processor)
# Set global propagator
set_global_textmap({})
# Instrument libraries
self._instrument_libraries()
self.is_initialized = True
logger.info("Distributed tracing initialized")
def _instrument_libraries(self):
"""Instrument common libraries for automatic tracing."""
# FastAPI
try:
FastAPIInstrumentor.instrument_app(
app=None, # Will be set when app is created
tracer_provider=self.tracer_provider,
excluded_urls=[
"/health",
"/metrics",
"/docs",
"/redoc",
"/openapi.json"
]
)
except Exception as e:
logger.warning(f"Failed to instrument FastAPI: {e}")
# HTTPX
try:
HTTPXClientInstrumentor().instrument()
except Exception as e:
logger.warning(f"Failed to instrument HTTPX: {e}")
# Redis
try:
RedisInstrumentor().instrument()
except Exception as e:
logger.warning(f"Failed to instrument Redis: {e}")
# SQLAlchemy (if used)
try:
SQLAlchemyInstrumentor().instrument()
except Exception as e:
logger.warning(f"Failed to instrument SQLAlchemy: {e}")
def get_tracer(self, name: str = None):
"""Get a tracer instance."""
if not self.is_initialized:
self.initialize()
return trace.get_tracer(name or self.service_name)
def shutdown(self):
"""Shutdown the tracer provider."""
if self.tracer_provider:
self.tracer_provider.shutdown()
self.is_initialized = False
logger.info("Distributed tracing shutdown")
# Global tracer instance
_distributed_tracer = DistributedTracer()
def get_distributed_tracer() -> DistributedTracer:
"""Get the global distributed tracer instance."""
return _distributed_tracer
class TraceContext:
"""Helper class for managing trace context."""
@staticmethod
def get_current_span() -> trace.Span:
"""Get the current span."""
return trace.get_current_span()
@staticmethod
def get_trace_id() -> str | None:
"""Get the current trace ID."""
span = trace.get_current_span()
if span:
span_context = span.get_span_context()
if span_context.is_valid:
return format(span_context.trace_id, "032x")
return None
@staticmethod
def get_span_id() -> str | None:
"""Get the current span ID."""
span = trace.get_current_span()
if span:
span_context = span.get_span_context()
if span_context.is_valid:
return format(span_context.span_id, "016x")
return None
@staticmethod
def set_baggage(key: str, value: str):
"""Set baggage item."""
baggage.set_baggage(key, value)
@staticmethod
def get_baggage(key: str) -> str | None:
"""Get baggage item."""
return baggage.get_baggage(key)
@staticmethod
def inject_headers(headers: dict[str, str]):
"""Inject trace context into headers."""
ctx = context.get_current()
carrier = {}
set_global_textmap().inject(carrier, ctx)
headers.update(carrier)
@staticmethod
def extract_from_headers(headers: dict[str, str]):
"""Extract trace context from headers."""
ctx = set_global_textmap().extract(headers)
return ctx
@asynccontextmanager
async def trace_span(
name: str,
kind: SpanKind = SpanKind.INTERNAL,
attributes: dict[str, Any] | None = None
):
"""Context manager for creating spans."""
tracer = get_distributed_tracer().get_tracer()
with tracer.start_as_current_span(name, kind=kind) as span:
if attributes:
for key, value in attributes.items():
span.set_attribute(key, str(value))
yield span
def trace_function(
name: str = None,
kind: SpanKind = SpanKind.INTERNAL,
attributes: dict[str, Any] | None = None
):
"""Decorator for tracing functions."""
def decorator(func):
import asyncio
import functools
span_name = name or f"{func.__module__}.{func.__name__}"
if asyncio.iscoroutinefunction(func):
@functools.wraps(func)
async def async_wrapper(*args, **kwargs):
tracer = get_distributed_tracer().get_tracer()
with tracer.start_as_current_span(span_name, kind=kind) as span:
if attributes:
for key, value in attributes.items():
span.set_attribute(key, str(value))
# Add function arguments as attributes (be careful with sensitive data)
span.set_attribute("function.name", func.__name__)
span.set_attribute("function.module", func.__module__)
try:
result = await func(*args, **kwargs)
span.set_status(Status(StatusCode.OK))
return result
except Exception as e:
span.set_status(Status(StatusCode.ERROR, str(e)))
span.record_exception(e)
raise
return async_wrapper
else:
@functools.wraps(func)
def sync_wrapper(*args, **kwargs):
tracer = get_distributed_tracer().get_tracer()
with tracer.start_as_current_span(span_name, kind=kind) as span:
if attributes:
for key, value in attributes.items():
span.set_attribute(key, str(value))
span.set_attribute("function.name", func.__name__)
span.set_attribute("function.module", func.__module__)
try:
result = func(*args, **kwargs)
span.set_status(Status(StatusCode.OK))
return result
except Exception as e:
span.set_status(Status(StatusCode.ERROR, str(e)))
span.record_exception(e)
raise
return sync_wrapper
return decorator
class TracingMiddleware:
"""Custom middleware for enhanced tracing."""
def __init__(self, app):
self.app = app
async def __call__(self, scope, receive, send):
"""ASGI middleware implementation."""
if scope["type"] != "http":
await self.app(scope, receive, send)
return
# Get tracer
tracer = get_distributed_tracer().get_tracer("asgi")
# Extract trace context from headers
headers = dict(scope.get("headers", []))
ctx = TraceContext.extract_from_headers(headers)
with tracer.start_as_current_span(
f"{scope['method']} {scope['path']}",
kind=SpanKind.SERVER,
context=ctx
) as span:
# Set standard attributes
span.set_attribute(SpanAttributes.HTTP_METHOD, scope["method"])
span.set_attribute(SpanAttributes.HTTP_URL, scope.get("path", ""))
span.set_attribute(SpanAttributes.HTTP_SCHEME, scope.get("scheme", "http"))
span.set_attribute(SpanAttributes.HTTP_HOST, scope.get("server", ("", ""))[0])
span.set_attribute(SpanAttributes.HTTP_USER_AGENT, self._get_header(headers, b"user-agent"))
span.set_attribute(SpanAttributes.HTTP_CLIENT_IP, self._get_client_ip(scope))
# Add custom baggage
TraceContext.set_baggage("service.name", "mediguard-api")
TraceContext.set_baggage("service.version", "2.0.0")
# Capture start time
start_time = time.time()
# Wrap send to capture response
async def traced_send(message):
if message["type"] == "http.response.start":
# Set response attributes
status = message.get("status", 200)
span.set_attribute(SpanAttributes.HTTP_STATUS_CODE, status)
# Mark error status
if status >= 400:
span.set_status(Status(StatusCode.ERROR))
else:
span.set_status(Status(StatusCode.OK))
elif message["type"] == "http.response.body":
# Calculate duration
duration = time.time() - start_time
span.set_attribute("http.response.duration_ms", duration * 1000)
await send(message)
await self.app(scope, receive, traced_send)
def _get_header(self, headers: dict[bytes, bytes], name: bytes) -> str | None:
"""Get header value by name."""
for key, value in headers.items():
if key.lower() == name.lower():
return value.decode("utf-8")
return None
def _get_client_ip(self, scope: dict[str, Any]) -> str | None:
"""Extract client IP from scope."""
# Check for forwarded headers
headers = dict(scope.get("headers", []))
# X-Forwarded-For
xff = self._get_header(headers, b"x-forwarded-for")
if xff:
return xff.split(",")[0].strip()
# X-Real-IP
xri = self._get_header(headers, b"x-real-ip")
if xri:
return xri
# Client from scope
client = scope.get("client")
if client:
return client[0]
return None
# Specialized tracing for different components
class DatabaseTracer:
"""Tracing utilities for database operations."""
@staticmethod
@trace_function(kind=SpanKind.CLIENT)
async def trace_query(query: str, params: dict[str, Any] = None):
"""Trace a database query."""
span = TraceContext.get_current_span()
span.set_attribute("db.query", query)
span.set_attribute("db.system", "opensearch")
if params:
span.set_attribute("db.params", str(params))
@staticmethod
@trace_function(kind=SpanKind.CLIENT)
async def trace_bulk_operation(operation: str, count: int):
"""Trace a bulk database operation."""
span = TraceContext.get_current_span()
span.set_attribute("db.operation", operation)
span.set_attribute("db.bulk_count", count)
class LLTracer:
"""Tracing utilities for LLM operations."""
@staticmethod
@trace_function(kind=SpanKind.CLIENT)
async def trace_llm_call(
model: str,
prompt: str,
response: str = None,
tokens: dict[str, int] = None
):
"""Trace an LLM API call."""
span = TraceContext.get_current_span()
span.set_attribute("llm.model", model)
span.set_attribute("llm.prompt", prompt[:1000]) # Truncate for privacy
span.set_attribute("llm.provider", "openai")
if response:
span.set_attribute("llm.response", response[:1000])
if tokens:
span.set_attribute("llm.tokens.prompt", tokens.get("prompt", 0))
span.set_attribute("llm.tokens.completion", tokens.get("completion", 0))
span.set_attribute("llm.tokens.total", tokens.get("total", 0))
class CacheTracer:
"""Tracing utilities for cache operations."""
@staticmethod
@trace_function(kind=SpanKind.CLIENT)
async def trace_cache_operation(operation: str, key: str, hit: bool = None):
"""Trace a cache operation."""
span = TraceContext.get_current_span()
span.set_attribute("cache.operation", operation)
span.set_attribute("cache.key", key)
span.set_attribute("cache.system", "redis")
if hit is not None:
span.set_attribute("cache.hit", hit)
class WorkflowTracer:
"""Tracing utilities for workflow operations."""
@staticmethod
@trace_function(kind=SpanKind.INTERNAL)
async def trace_workflow_step(
workflow_name: str,
step_name: str,
step_duration: float,
success: bool
):
"""Trace a workflow step."""
span = TraceContext.get_current_span()
span.set_attribute("workflow.name", workflow_name)
span.set_attribute("workflow.step", step_name)
span.set_attribute("workflow.step.duration_ms", step_duration * 1000)
span.set_attribute("workflow.step.success", success)
# Integration with existing services
async def trace_http_request(
method: str,
url: str,
headers: dict[str, str] = None,
status_code: int = None,
duration_ms: float = None
):
"""Trace an HTTP request."""
with trace_span(
f"HTTP {method}",
kind=SpanKind.CLIENT,
attributes={
"http.method": method,
"http.url": url,
"http.status_code": status_code,
"http.duration_ms": duration_ms
}
) as span:
if status_code and status_code >= 400:
span.set_status(Status(StatusCode.ERROR))
# Metrics integration
class TraceMetrics:
"""Extract metrics from traces."""
def __init__(self):
self.request_counts: dict[str, int] = {}
self.error_counts: dict[str, int] = {}
self.response_times: dict[str, list[float]] = {}
def record_span(self, span_data: dict[str, Any]):
"""Record span data for metrics."""
name = span_data.get("name", "")
duration = span_data.get("duration_ms", 0)
status = span_data.get("status", "ok")
# Count requests
self.request_counts[name] = self.request_counts.get(name, 0) + 1
# Count errors
if status != "ok":
self.error_counts[name] = self.error_counts.get(name, 0) + 1
# Track response times
if name not in self.response_times:
self.response_times[name] = []
self.response_times[name].append(duration)
def get_metrics(self) -> dict[str, Any]:
"""Get aggregated metrics."""
return {
"request_counts": self.request_counts,
"error_counts": self.error_counts,
"avg_response_times": {
name: sum(times) / len(times)
for name, times in self.response_times.items()
if times
}
}
# Initialization function for FastAPI app
def initialize_tracing(app):
"""Initialize tracing for FastAPI application."""
# Initialize distributed tracer
tracer = get_distributed_tracer()
tracer.initialize()
# Add custom middleware
app.add_middleware(TracingMiddleware)
# Instrument FastAPI
FastAPIInstrumentor.instrument_app(app)
logger.info("Tracing initialized for FastAPI application")
|