Agentic-RagBot / scripts /benchmark.py
MediGuard AI
feat: Initial release of MediGuard AI v2.0
c4f5f25
"""
Performance benchmarking suite for MediGuard AI.
Measures and tracks performance metrics across different components.
"""
import asyncio
import time
import statistics
import json
from typing import Dict, List, Any
from dataclasses import dataclass
from concurrent.futures import ThreadPoolExecutor, as_completed
import httpx
from src.workflow import create_guild
from src.state import PatientInput
@dataclass
class BenchmarkResult:
"""Results from a benchmark run."""
metric_name: str
value: float
unit: str
samples: int
min_value: float
max_value: float
mean: float
median: float
p95: float
p99: float
class PerformanceBenchmark:
"""Performance benchmarking suite."""
def __init__(self, base_url: str = "http://localhost:8000"):
self.base_url = base_url
self.results: List[BenchmarkResult] = []
async def benchmark_api_endpoints(self, concurrent_users: int = 10, requests_per_user: int = 5):
"""Benchmark API endpoints under load."""
print(f"\n๐Ÿš€ Benchmarking API endpoints with {concurrent_users} concurrent users...")
endpoints = [
("/health", "GET", {}),
("/analyze/structured", "POST", {
"biomarkers": {"Glucose": 140, "HbA1c": 10.0},
"patient_context": {"age": 45, "gender": "male"}
}),
("/ask", "POST", {
"question": "What are the symptoms of diabetes?",
"context": {"patient_age": 45}
}),
("/search", "POST", {
"query": "diabetes management",
"top_k": 5
})
]
for endpoint, method, payload in endpoints:
await self._benchmark_endpoint(endpoint, method, payload, concurrent_users, requests_per_user)
async def _benchmark_endpoint(self, endpoint: str, method: str, payload: Dict,
concurrent_users: int, requests_per_user: int):
"""Benchmark a single endpoint."""
url = f"{self.base_url}{endpoint}"
response_times = []
async with httpx.AsyncClient(timeout=30.0) as client:
tasks = []
for _ in range(concurrent_users):
for _ in range(requests_per_user):
if method == "GET":
task = self._make_request(client, "GET", url)
else:
task = self._make_request(client, "POST", url, json=payload)
tasks.append(task)
# Execute all requests
start_time = time.time()
responses = await asyncio.gather(*tasks, return_exceptions=True)
total_time = time.time() - start_time
# Collect response times
for response in responses:
if isinstance(response, Exception):
print(f"Request failed: {response}")
else:
response_times.append(response)
# Calculate metrics
if response_times:
result = BenchmarkResult(
metric_name=f"{method} {endpoint}",
value=statistics.mean(response_times),
unit="ms",
samples=len(response_times),
min_value=min(response_times),
max_value=max(response_times),
mean=statistics.mean(response_times),
median=statistics.median(response_times),
p95=self._percentile(response_times, 95),
p99=self._percentile(response_times, 99)
)
self.results.append(result)
# Print results
print(f"\n๐Ÿ“Š {method} {endpoint}:")
print(f" Requests: {result.samples}")
print(f" Average: {result.mean:.2f}ms")
print(f" Median: {result.median:.2f}ms")
print(f" P95: {result.p95:.2f}ms")
print(f" P99: {result.p99:.2f}ms")
print(f" Throughput: {result.samples / total_time:.2f} req/s")
async def _make_request(self, client: httpx.AsyncClient, method: str, url: str, json: Dict = None) -> float:
"""Make a single request and return response time."""
start_time = time.time()
try:
if method == "GET":
response = await client.get(url)
else:
response = await client.post(url, json=json)
response.raise_for_status()
return (time.time() - start_time) * 1000 # Convert to ms
except Exception as e:
print(f"Request error: {e}")
return float('inf')
def _percentile(self, data: List[float], percentile: float) -> float:
"""Calculate percentile of data."""
sorted_data = sorted(data)
index = int(len(sorted_data) * percentile / 100)
return sorted_data[min(index, len(sorted_data) - 1)]
async def benchmark_workflow_performance(self, iterations: int = 10):
"""Benchmark the workflow performance."""
print(f"\nโš™๏ธ Benchmarking workflow performance ({iterations} iterations)...")
guild = create_guild()
response_times = []
for i in range(iterations):
patient_input = PatientInput(
biomarkers={"Glucose": 140, "HbA1c": 10.0, "Hemoglobin": 11.5},
patient_context={"age": 45, "gender": "male", "symptoms": ["fatigue"]},
model_prediction={"disease": "Diabetes", "confidence": 0.9}
)
start_time = time.time()
try:
result = await guild.workflow.ainvoke(patient_input)
if "final_response" in result:
response_times.append((time.time() - start_time) * 1000)
except Exception as e:
print(f"Iteration {i} failed: {e}")
if response_times:
result = BenchmarkResult(
metric_name="Workflow Execution",
value=statistics.mean(response_times),
unit="ms",
samples=len(response_times),
min_value=min(response_times),
max_value=max(response_times),
mean=statistics.mean(response_times),
median=statistics.median(response_times),
p95=self._percentile(response_times, 95),
p99=self._percentile(response_times, 99)
)
self.results.append(result)
print(f"\n๐Ÿ“Š Workflow Performance:")
print(f" Average: {result.mean:.2f}ms")
print(f" Median: {result.median:.2f}ms")
print(f" P95: {result.p95:.2f}ms")
def benchmark_memory_usage(self):
"""Benchmark memory usage."""
import psutil
import os
process = psutil.Process(os.getpid())
memory_info = process.memory_info()
print(f"\n๐Ÿ’พ Memory Usage:")
print(f" RSS: {memory_info.rss / 1024 / 1024:.2f} MB")
print(f" VMS: {memory_info.vms / 1024 / 1024:.2f} MB")
print(f" % Memory: {process.memory_percent():.2f}%")
# Track memory over time
memory_samples = []
for _ in range(10):
memory_samples.append(process.memory_info().rss / 1024 / 1024)
time.sleep(1)
print(f" Memory range: {min(memory_samples):.2f} - {max(memory_samples):.2f} MB")
async def benchmark_database_queries(self):
"""Benchmark database query performance."""
print(f"\n๐Ÿ—„๏ธ Benchmarking database queries...")
# Test OpenSearch query performance
try:
from src.services.opensearch.client import make_opensearch_client
client = make_opensearch_client()
query_times = []
for _ in range(10):
start_time = time.time()
results = client.search(
index="medical_chunks",
body={"query": {"match": {"text": "diabetes"}}, "size": 10}
)
query_times.append((time.time() - start_time) * 1000)
if query_times:
result = BenchmarkResult(
metric_name="OpenSearch Query",
value=statistics.mean(query_times),
unit="ms",
samples=len(query_times),
min_value=min(query_times),
max_value=max(query_times),
mean=statistics.mean(query_times),
median=statistics.median(query_times),
p95=self._percentile(query_times, 95),
p99=self._percentile(query_times, 99)
)
self.results.append(result)
print(f"\n๐Ÿ“Š OpenSearch Query Performance:")
print(f" Average: {result.mean:.2f}ms")
print(f" P95: {result.p95:.2f}ms")
except Exception as e:
print(f" OpenSearch benchmark failed: {e}")
# Test Redis cache performance
try:
from src.services.cache.redis_cache import make_redis_cache
cache = make_redis_cache()
cache_times = []
test_key = "benchmark_test"
test_value = json.dumps({"test": "data"})
# Benchmark writes
for _ in range(100):
start_time = time.time()
cache.set(test_key, test_value, ttl=60)
cache_times.append((time.time() - start_time) * 1000)
# Benchmark reads
read_times = []
for _ in range(100):
start_time = time.time()
cache.get(test_key)
read_times.append((time.time() - start_time) * 1000)
# Clean up
cache.delete(test_key)
write_result = BenchmarkResult(
metric_name="Redis Write",
value=statistics.mean(cache_times),
unit="ms",
samples=len(cache_times),
min_value=min(cache_times),
max_value=max(cache_times),
mean=statistics.mean(cache_times),
median=statistics.median(cache_times),
p95=self._percentile(cache_times, 95),
p99=self._percentile(cache_times, 99)
)
self.results.append(write_result)
read_result = BenchmarkResult(
metric_name="Redis Read",
value=statistics.mean(read_times),
unit="ms",
samples=len(read_times),
min_value=min(read_times),
max_value=max(read_times),
mean=statistics.mean(read_times),
median=statistics.median(read_times),
p95=self._percentile(read_times, 95),
p99=self._percentile(read_times, 99)
)
self.results.append(read_result)
print(f"\n๐Ÿ“Š Redis Performance:")
print(f" Write - Average: {write_result.mean:.2f}ms, P95: {write_result.p95:.2f}ms")
print(f" Read - Average: {read_result.mean:.2f}ms, P95: {read_result.p95:.2f}ms")
except Exception as e:
print(f" Redis benchmark failed: {e}")
def save_results(self, filename: str = "benchmark_results.json"):
"""Save benchmark results to file."""
results_data = []
for result in self.results:
results_data.append({
"metric": result.metric_name,
"value": result.value,
"unit": result.unit,
"samples": result.samples,
"min": result.min_value,
"max": result.max_value,
"mean": result.mean,
"median": result.median,
"p95": result.p95,
"p99": result.p99
})
with open(filename, 'w') as f:
json.dump({
"timestamp": time.time(),
"results": results_data
}, f, indent=2)
print(f"\n๐Ÿ’พ Results saved to {filename}")
def print_summary(self):
"""Print a summary of all benchmark results."""
print("\n" + "="*70)
print("๐Ÿ“Š PERFORMANCE BENCHMARK SUMMARY")
print("="*70)
for result in self.results:
print(f"\n{result.metric_name}:")
print(f" Average: {result.mean:.2f}{result.unit}")
print(f" Range: {result.min_value:.2f} - {result.max_value:.2f}{result.unit}")
print(f" Samples: {result.samples}")
async def main():
"""Run the complete benchmark suite."""
print("๐Ÿš€ Starting MediGuard AI Performance Benchmark Suite")
print("="*70)
benchmark = PerformanceBenchmark()
# Run all benchmarks
await benchmark.benchmark_api_endpoints(concurrent_users=5, requests_per_user=3)
await benchmark.benchmark_workflow_performance(iterations=5)
benchmark.benchmark_memory_usage()
await benchmark.benchmark_database_queries()
# Save and display results
benchmark.save_results()
benchmark.print_summary()
print("\nโœ… Benchmark suite completed!")
if __name__ == "__main__":
asyncio.run(main())