Agentic-RagBot / tests /basic_test_script.py
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chore: codebase audit and fixes (ruff, mypy, pytest)
9659593
"""
MediGuard AI RAG-Helper - SIMPLIFIED TEST
Tests the multi-agent workflow with a diabetes patient case
"""
import sys
from pathlib import Path
sys.path.insert(0, str(Path(__file__).parent.parent))
# Test if we can at least import everything
print("Testing imports...")
try:
from src.state import PatientInput
print("PatientInput imported")
print("BASELINE_SOP imported")
from src.pdf_processor import get_all_retrievers
print("get_all_retrievers imported")
print("llm_config imported")
from src.biomarker_validator import BiomarkerValidator
print("BiomarkerValidator imported")
print("\n" + "=" * 70)
print("ALL IMPORTS SUCCESSFUL")
print("=" * 70)
# Test retrievers
print("\nTesting retrievers...")
retrievers = get_all_retrievers(force_rebuild=False)
print(f"Retrieved {len(retrievers)} retrievers")
print(f" Available: {list(retrievers.keys())}")
# Test patient input creation
print("\nTesting PatientInput creation...")
patient = PatientInput(
biomarkers={"Glucose": 185.0, "HbA1c": 8.2},
model_prediction={"disease": "Type 2 Diabetes", "confidence": 0.87, "probabilities": {}},
patient_context={"age": 52, "gender": "male", "bmi": 31.2},
)
print("PatientInput created")
print(f" Disease: {patient.model_prediction['disease']}")
print(f" Confidence: {patient.model_prediction['confidence']:.1%}")
# Test biomarker validator
print("\nTesting BiomarkerValidator...")
validator = BiomarkerValidator()
flags, alerts = validator.validate_all(patient.biomarkers, patient.patient_context.get("gender", "male"))
print("Validator working")
print(f" Flags: {len(flags)}")
print(f" Alerts: {len(alerts)}")
print("\n" + "=" * 70)
print("BASIC SYSTEM TEST PASSED!")
print("=" * 70)
print("\nNote: Full workflow integration requires state refactoring.")
print("All core components are functional and ready.")
except Exception as e:
print(f"\nERROR: {e}")
import traceback
traceback.print_exc()