Spaces:
Sleeping
Sleeping
Nikhil Pravin Pise commited on
Commit Β·
193fabd
1
Parent(s): 150e705
Overhaul Gradio UI with modern medical design
Browse files- Complete redesign with professional medical theme
- Gradient backgrounds and styled cards
- Beautiful biomarker status indicators
- Enhanced HTML output for analysis results
- Agent cards with hover effects
- Responsive grid layouts
- Better visual hierarchy
- Custom CSS for all components
- Improved error and status messages
- huggingface/app.py +603 -152
huggingface/app.py
CHANGED
|
@@ -176,35 +176,49 @@ def analyze_biomarkers(input_text: str, progress=gr.Progress()) -> tuple[str, st
|
|
| 176 |
Returns: (summary, details_json, status)
|
| 177 |
"""
|
| 178 |
if not input_text.strip():
|
| 179 |
-
return "", "", "
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 180 |
|
| 181 |
# Check API key dynamically (HF injects secrets after startup)
|
| 182 |
groq_key, google_key = get_api_keys()
|
| 183 |
|
| 184 |
if not groq_key and not google_key:
|
| 185 |
-
return "", "",
|
| 186 |
-
|
| 187 |
-
|
| 188 |
-
|
| 189 |
-
|
| 190 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
| 191 |
|
| 192 |
# Setup provider based on available key
|
| 193 |
provider = setup_llm_provider()
|
| 194 |
logger.info(f"Using LLM provider: {provider}")
|
| 195 |
|
| 196 |
try:
|
| 197 |
-
progress(0.1, desc="Parsing biomarkers...")
|
| 198 |
biomarkers = parse_biomarkers(input_text)
|
| 199 |
|
| 200 |
if not biomarkers:
|
| 201 |
-
return "", "",
|
| 202 |
-
|
| 203 |
-
|
| 204 |
-
|
| 205 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 206 |
|
| 207 |
-
progress(0.2, desc="Initializing
|
| 208 |
|
| 209 |
# Initialize guild
|
| 210 |
guild = get_guild()
|
|
@@ -221,14 +235,14 @@ def analyze_biomarkers(input_text: str, progress=gr.Progress()) -> tuple[str, st
|
|
| 221 |
patient_context={"patient_id": "HF_User", "source": "huggingface_spaces"}
|
| 222 |
)
|
| 223 |
|
| 224 |
-
progress(0.4, desc="Running Clinical Insight Guild...")
|
| 225 |
|
| 226 |
# Run analysis
|
| 227 |
start = time.time()
|
| 228 |
result = guild.run(patient_input)
|
| 229 |
elapsed = time.time() - start
|
| 230 |
|
| 231 |
-
progress(0.9, desc="Formatting results...")
|
| 232 |
|
| 233 |
# Extract response
|
| 234 |
final_response = result.get("final_response", {})
|
|
@@ -239,13 +253,31 @@ def analyze_biomarkers(input_text: str, progress=gr.Progress()) -> tuple[str, st
|
|
| 239 |
# Format details
|
| 240 |
details = json.dumps(final_response, indent=2, default=str)
|
| 241 |
|
| 242 |
-
status = f"
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 243 |
|
| 244 |
return summary, details, status
|
| 245 |
|
| 246 |
except Exception as exc:
|
| 247 |
logger.error(f"Analysis error: {exc}", exc_info=True)
|
| 248 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 249 |
|
| 250 |
|
| 251 |
def auto_predict(biomarkers: dict[str, float]) -> dict[str, Any]:
|
|
@@ -314,103 +346,190 @@ def auto_predict(biomarkers: dict[str, float]) -> dict[str, Any]:
|
|
| 314 |
|
| 315 |
|
| 316 |
def format_summary(response: dict, elapsed: float) -> str:
|
| 317 |
-
"""Format the analysis response as
|
| 318 |
if not response:
|
| 319 |
-
return "
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 320 |
|
| 321 |
parts = []
|
| 322 |
|
| 323 |
-
# Header
|
| 324 |
-
primary = response.get("primary_finding", "Analysis")
|
| 325 |
confidence = response.get("confidence", {})
|
| 326 |
conf_score = confidence.get("overall_score", 0) if isinstance(confidence, dict) else 0
|
| 327 |
|
| 328 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 329 |
if conf_score:
|
| 330 |
-
|
| 331 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 332 |
|
| 333 |
# Critical Alerts
|
| 334 |
alerts = response.get("safety_alerts", [])
|
| 335 |
if alerts:
|
| 336 |
-
|
| 337 |
for alert in alerts[:5]:
|
| 338 |
if isinstance(alert, dict):
|
| 339 |
-
|
| 340 |
else:
|
| 341 |
-
|
| 342 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 343 |
|
| 344 |
# Key Findings
|
| 345 |
findings = response.get("key_findings", [])
|
| 346 |
if findings:
|
| 347 |
-
|
| 348 |
-
|
| 349 |
-
|
| 350 |
-
|
|
|
|
|
|
|
|
|
|
| 351 |
|
| 352 |
-
# Biomarker Flags
|
| 353 |
flags = response.get("biomarker_flags", [])
|
| 354 |
if flags:
|
| 355 |
-
|
| 356 |
for flag in flags[:8]:
|
| 357 |
if isinstance(flag, dict):
|
| 358 |
name = flag.get("biomarker", "Unknown")
|
| 359 |
status = flag.get("status", "normal")
|
| 360 |
value = flag.get("value", "N/A")
|
| 361 |
-
|
| 362 |
-
|
| 363 |
-
|
| 364 |
-
|
| 365 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 366 |
|
| 367 |
-
# Recommendations
|
| 368 |
recs = response.get("recommendations", {})
|
| 369 |
if recs:
|
| 370 |
-
|
| 371 |
|
| 372 |
immediate = recs.get("immediate_actions", [])
|
| 373 |
if immediate:
|
| 374 |
-
|
| 375 |
-
|
| 376 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
| 377 |
|
| 378 |
lifestyle = recs.get("lifestyle_modifications", [])
|
| 379 |
if lifestyle:
|
| 380 |
-
|
| 381 |
-
|
| 382 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
| 383 |
|
| 384 |
followup = recs.get("follow_up", [])
|
| 385 |
if followup:
|
| 386 |
-
|
| 387 |
-
|
| 388 |
-
|
| 389 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 390 |
|
| 391 |
# Disease Explanation
|
| 392 |
explanation = response.get("disease_explanation", {})
|
| 393 |
if explanation and isinstance(explanation, dict):
|
| 394 |
-
parts.append("### π Understanding Your Results")
|
| 395 |
-
|
| 396 |
pathophys = explanation.get("pathophysiology", "")
|
| 397 |
if pathophys:
|
| 398 |
-
parts.append(f"
|
| 399 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
| 400 |
|
| 401 |
# Conversational Summary
|
| 402 |
conv_summary = response.get("conversational_summary", "")
|
| 403 |
if conv_summary:
|
| 404 |
-
parts.append("
|
| 405 |
-
|
| 406 |
-
|
|
|
|
|
|
|
|
|
|
| 407 |
|
| 408 |
# Footer
|
| 409 |
-
parts.append("
|
| 410 |
-
|
| 411 |
-
|
| 412 |
-
|
| 413 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 414 |
|
| 415 |
return "\n".join(parts)
|
| 416 |
|
|
@@ -419,65 +538,330 @@ def format_summary(response: dict, elapsed: float) -> str:
|
|
| 419 |
# Gradio Interface
|
| 420 |
# ---------------------------------------------------------------------------
|
| 421 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 422 |
def create_demo() -> gr.Blocks:
|
| 423 |
-
"""Create the Gradio Blocks interface."""
|
| 424 |
|
| 425 |
with gr.Blocks(
|
| 426 |
-
title="
|
| 427 |
-
theme=gr.themes.Soft(
|
| 428 |
-
|
| 429 |
-
|
| 430 |
-
|
| 431 |
-
|
| 432 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 433 |
) as demo:
|
| 434 |
|
| 435 |
-
#
|
| 436 |
-
gr.
|
| 437 |
-
|
| 438 |
-
|
| 439 |
-
|
| 440 |
-
|
| 441 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 442 |
""")
|
| 443 |
|
| 444 |
-
# API
|
| 445 |
-
|
| 446 |
-
|
| 447 |
-
|
| 448 |
-
|
| 449 |
-
|
|
|
|
|
|
|
|
|
|
| 450 |
</div>
|
| 451 |
""")
|
| 452 |
|
| 453 |
-
|
| 454 |
-
|
| 455 |
-
|
| 456 |
-
|
| 457 |
-
|
| 458 |
-
|
| 459 |
-
label="Biomarkers",
|
| 460 |
-
placeholder=(
|
| 461 |
-
"Enter biomarkers in any format:\n"
|
| 462 |
-
"β’ Glucose: 140, HbA1c: 7.5, Cholesterol: 210\n"
|
| 463 |
-
"β’ My glucose is 140 and HbA1c is 7.5\n"
|
| 464 |
-
'β’ {"Glucose": 140, "HbA1c": 7.5}'
|
| 465 |
-
),
|
| 466 |
-
lines=5,
|
| 467 |
-
max_lines=10,
|
| 468 |
-
)
|
| 469 |
|
| 470 |
-
with gr.
|
| 471 |
-
|
| 472 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 473 |
|
|
|
|
| 474 |
status_output = gr.Markdown(
|
| 475 |
-
|
| 476 |
elem_classes="status-box"
|
| 477 |
)
|
| 478 |
|
| 479 |
-
#
|
| 480 |
-
gr.
|
|
|
|
| 481 |
|
| 482 |
examples = gr.Examples(
|
| 483 |
examples=[
|
|
@@ -485,31 +869,123 @@ def create_demo() -> gr.Blocks:
|
|
| 485 |
["Glucose: 95, HbA1c: 5.4, Cholesterol: 180, HDL: 55, LDL: 100"],
|
| 486 |
["Hemoglobin: 9.5, Iron: 40, Ferritin: 15"],
|
| 487 |
["TSH: 8.5, T4: 4.0, T3: 80"],
|
| 488 |
-
[
|
| 489 |
],
|
| 490 |
inputs=input_text,
|
| 491 |
-
label="
|
| 492 |
)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 493 |
|
| 494 |
-
#
|
| 495 |
-
with gr.Column(scale=
|
| 496 |
-
gr.
|
| 497 |
|
| 498 |
-
with gr.Tabs():
|
| 499 |
-
with gr.Tab("Summary"):
|
| 500 |
summary_output = gr.Markdown(
|
| 501 |
-
|
| 502 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 503 |
)
|
| 504 |
|
| 505 |
-
with gr.Tab("Detailed JSON"):
|
| 506 |
details_output = gr.Code(
|
| 507 |
-
label="
|
| 508 |
language="json",
|
| 509 |
-
lines=
|
|
|
|
| 510 |
)
|
| 511 |
|
| 512 |
-
#
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 513 |
analyze_btn.click(
|
| 514 |
fn=analyze_biomarkers,
|
| 515 |
inputs=[input_text],
|
|
@@ -518,40 +994,15 @@ def create_demo() -> gr.Blocks:
|
|
| 518 |
)
|
| 519 |
|
| 520 |
clear_btn.click(
|
| 521 |
-
fn=lambda: ("", ""
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 522 |
outputs=[input_text, summary_output, details_output, status_output],
|
| 523 |
)
|
| 524 |
-
|
| 525 |
-
# Footer
|
| 526 |
-
gr.Markdown("""
|
| 527 |
-
---
|
| 528 |
-
|
| 529 |
-
### βΉοΈ About MediGuard AI
|
| 530 |
-
|
| 531 |
-
MediGuard AI uses a **Clinical Insight Guild** of 6 specialized AI agents:
|
| 532 |
-
|
| 533 |
-
| Agent | Role |
|
| 534 |
-
|-------|------|
|
| 535 |
-
| π¬ Biomarker Analyzer | Validates and flags abnormal values |
|
| 536 |
-
| π Disease Explainer | RAG-powered pathophysiology explanations |
|
| 537 |
-
| π Biomarker Linker | Connects biomarkers to disease predictions |
|
| 538 |
-
| π Clinical Guidelines | Evidence-based recommendations from medical literature |
|
| 539 |
-
| β
Confidence Assessor | Evaluates reliability of findings |
|
| 540 |
-
| π Response Synthesizer | Compiles comprehensive patient-friendly output |
|
| 541 |
-
|
| 542 |
-
**Data Sources**: 750+ pages of clinical guidelines (FAISS vector store)
|
| 543 |
-
|
| 544 |
-
---
|
| 545 |
-
|
| 546 |
-
β οΈ **Medical Disclaimer**: This tool is for **informational purposes only** and does not
|
| 547 |
-
replace professional medical advice, diagnosis, or treatment. Always consult a qualified
|
| 548 |
-
healthcare provider with questions regarding a medical condition.
|
| 549 |
-
|
| 550 |
-
---
|
| 551 |
-
|
| 552 |
-
Built with β€οΈ using [LangGraph](https://langchain-ai.github.io/langgraph/),
|
| 553 |
-
[FAISS](https://faiss.ai/), and [Gradio](https://gradio.app/)
|
| 554 |
-
""")
|
| 555 |
|
| 556 |
return demo
|
| 557 |
|
|
|
|
| 176 |
Returns: (summary, details_json, status)
|
| 177 |
"""
|
| 178 |
if not input_text.strip():
|
| 179 |
+
return "", "", """
|
| 180 |
+
<div style="background: linear-gradient(135deg, #f0f4f8 0%, #e2e8f0 100%); border: 1px solid #cbd5e1; border-radius: 10px; padding: 16px; text-align: center;">
|
| 181 |
+
<span style="font-size: 2em;">βοΈ</span>
|
| 182 |
+
<p style="margin: 8px 0 0 0; color: #64748b;">Please enter biomarkers to analyze.</p>
|
| 183 |
+
</div>
|
| 184 |
+
"""
|
| 185 |
|
| 186 |
# Check API key dynamically (HF injects secrets after startup)
|
| 187 |
groq_key, google_key = get_api_keys()
|
| 188 |
|
| 189 |
if not groq_key and not google_key:
|
| 190 |
+
return "", "", """
|
| 191 |
+
<div style="background: linear-gradient(135deg, #fee2e2 0%, #fecaca 100%); border: 1px solid #ef4444; border-radius: 10px; padding: 16px;">
|
| 192 |
+
<strong style="color: #dc2626;">β No API Key Configured</strong>
|
| 193 |
+
<p style="margin: 12px 0 8px 0; color: #991b1b;">Please add your API key in Space Settings β Secrets:</p>
|
| 194 |
+
<ul style="margin: 0; color: #7f1d1d;">
|
| 195 |
+
<li><code>GROQ_API_KEY</code> - <a href="https://console.groq.com/keys" target="_blank" style="color: #2563eb;">Get free key β</a></li>
|
| 196 |
+
<li><code>GOOGLE_API_KEY</code> - <a href="https://aistudio.google.com/app/apikey" target="_blank" style="color: #2563eb;">Get free key β</a></li>
|
| 197 |
+
</ul>
|
| 198 |
+
</div>
|
| 199 |
+
"""
|
| 200 |
|
| 201 |
# Setup provider based on available key
|
| 202 |
provider = setup_llm_provider()
|
| 203 |
logger.info(f"Using LLM provider: {provider}")
|
| 204 |
|
| 205 |
try:
|
| 206 |
+
progress(0.1, desc="π Parsing biomarkers...")
|
| 207 |
biomarkers = parse_biomarkers(input_text)
|
| 208 |
|
| 209 |
if not biomarkers:
|
| 210 |
+
return "", "", """
|
| 211 |
+
<div style="background: linear-gradient(135deg, #fef3c7 0%, #fde68a 100%); border: 1px solid #fbbf24; border-radius: 10px; padding: 16px;">
|
| 212 |
+
<strong>β οΈ Could not parse biomarkers</strong>
|
| 213 |
+
<p style="margin: 8px 0 0 0; color: #92400e;">Try formats like:</p>
|
| 214 |
+
<ul style="margin: 8px 0 0 0; color: #92400e;">
|
| 215 |
+
<li><code>Glucose: 140, HbA1c: 7.5</code></li>
|
| 216 |
+
<li><code>{"Glucose": 140, "HbA1c": 7.5}</code></li>
|
| 217 |
+
</ul>
|
| 218 |
+
</div>
|
| 219 |
+
"""
|
| 220 |
|
| 221 |
+
progress(0.2, desc="π§ Initializing AI agents...")
|
| 222 |
|
| 223 |
# Initialize guild
|
| 224 |
guild = get_guild()
|
|
|
|
| 235 |
patient_context={"patient_id": "HF_User", "source": "huggingface_spaces"}
|
| 236 |
)
|
| 237 |
|
| 238 |
+
progress(0.4, desc="π€ Running Clinical Insight Guild...")
|
| 239 |
|
| 240 |
# Run analysis
|
| 241 |
start = time.time()
|
| 242 |
result = guild.run(patient_input)
|
| 243 |
elapsed = time.time() - start
|
| 244 |
|
| 245 |
+
progress(0.9, desc="β¨ Formatting results...")
|
| 246 |
|
| 247 |
# Extract response
|
| 248 |
final_response = result.get("final_response", {})
|
|
|
|
| 253 |
# Format details
|
| 254 |
details = json.dumps(final_response, indent=2, default=str)
|
| 255 |
|
| 256 |
+
status = f"""
|
| 257 |
+
<div style="background: linear-gradient(135deg, #d1fae5 0%, #a7f3d0 100%); border: 1px solid #10b981; border-radius: 10px; padding: 12px; display: flex; align-items: center; gap: 10px;">
|
| 258 |
+
<span style="font-size: 1.5em;">β
</span>
|
| 259 |
+
<div>
|
| 260 |
+
<strong style="color: #047857;">Analysis Complete</strong>
|
| 261 |
+
<span style="color: #065f46; margin-left: 8px;">({elapsed:.1f}s)</span>
|
| 262 |
+
</div>
|
| 263 |
+
</div>
|
| 264 |
+
"""
|
| 265 |
|
| 266 |
return summary, details, status
|
| 267 |
|
| 268 |
except Exception as exc:
|
| 269 |
logger.error(f"Analysis error: {exc}", exc_info=True)
|
| 270 |
+
error_msg = f"""
|
| 271 |
+
<div style="background: linear-gradient(135deg, #fee2e2 0%, #fecaca 100%); border: 1px solid #ef4444; border-radius: 10px; padding: 16px;">
|
| 272 |
+
<strong style="color: #dc2626;">β Analysis Error</strong>
|
| 273 |
+
<p style="margin: 8px 0 0 0; color: #991b1b;">{exc}</p>
|
| 274 |
+
<details style="margin-top: 12px;">
|
| 275 |
+
<summary style="cursor: pointer; color: #7f1d1d;">Show details</summary>
|
| 276 |
+
<pre style="margin-top: 8px; padding: 12px; background: #fef2f2; border-radius: 6px; overflow-x: auto; font-size: 0.8em;">{traceback.format_exc()}</pre>
|
| 277 |
+
</details>
|
| 278 |
+
</div>
|
| 279 |
+
"""
|
| 280 |
+
return "", "", error_msg
|
| 281 |
|
| 282 |
|
| 283 |
def auto_predict(biomarkers: dict[str, float]) -> dict[str, Any]:
|
|
|
|
| 346 |
|
| 347 |
|
| 348 |
def format_summary(response: dict, elapsed: float) -> str:
|
| 349 |
+
"""Format the analysis response as beautiful HTML/markdown."""
|
| 350 |
if not response:
|
| 351 |
+
return """
|
| 352 |
+
<div style="text-align: center; padding: 40px; color: #94a3b8;">
|
| 353 |
+
<div style="font-size: 3em;">β</div>
|
| 354 |
+
<p>No analysis results available.</p>
|
| 355 |
+
</div>
|
| 356 |
+
"""
|
| 357 |
|
| 358 |
parts = []
|
| 359 |
|
| 360 |
+
# Header with primary finding and confidence
|
| 361 |
+
primary = response.get("primary_finding", "Analysis Complete")
|
| 362 |
confidence = response.get("confidence", {})
|
| 363 |
conf_score = confidence.get("overall_score", 0) if isinstance(confidence, dict) else 0
|
| 364 |
|
| 365 |
+
# Determine severity color
|
| 366 |
+
severity = response.get("severity", "low")
|
| 367 |
+
severity_colors = {
|
| 368 |
+
"critical": ("#dc2626", "#fef2f2", "π΄"),
|
| 369 |
+
"high": ("#ea580c", "#fff7ed", "π "),
|
| 370 |
+
"moderate": ("#ca8a04", "#fefce8", "π‘"),
|
| 371 |
+
"low": ("#16a34a", "#f0fdf4", "π’")
|
| 372 |
+
}
|
| 373 |
+
color, bg_color, emoji = severity_colors.get(severity, severity_colors["low"])
|
| 374 |
+
|
| 375 |
+
# Confidence badge
|
| 376 |
+
conf_badge = ""
|
| 377 |
if conf_score:
|
| 378 |
+
conf_pct = int(conf_score * 100)
|
| 379 |
+
conf_color = "#16a34a" if conf_pct >= 80 else "#ca8a04" if conf_pct >= 60 else "#dc2626"
|
| 380 |
+
conf_badge = f'<span style="background: {conf_color}; color: white; padding: 4px 12px; border-radius: 20px; font-size: 0.85em; margin-left: 12px;">{conf_pct}% confidence</span>'
|
| 381 |
+
|
| 382 |
+
parts.append(f"""
|
| 383 |
+
<div style="background: linear-gradient(135deg, {bg_color} 0%, white 100%); border-left: 4px solid {color}; border-radius: 12px; padding: 20px; margin-bottom: 20px;">
|
| 384 |
+
<div style="display: flex; align-items: center; flex-wrap: wrap;">
|
| 385 |
+
<span style="font-size: 1.5em; margin-right: 12px;">{emoji}</span>
|
| 386 |
+
<h2 style="margin: 0; color: {color}; font-size: 1.4em;">{primary}</h2>
|
| 387 |
+
{conf_badge}
|
| 388 |
+
</div>
|
| 389 |
+
</div>
|
| 390 |
+
""")
|
| 391 |
|
| 392 |
# Critical Alerts
|
| 393 |
alerts = response.get("safety_alerts", [])
|
| 394 |
if alerts:
|
| 395 |
+
alert_items = ""
|
| 396 |
for alert in alerts[:5]:
|
| 397 |
if isinstance(alert, dict):
|
| 398 |
+
alert_items += f'<li><strong>{alert.get("alert_type", "Alert")}:</strong> {alert.get("message", "")}</li>'
|
| 399 |
else:
|
| 400 |
+
alert_items += f'<li>{alert}</li>'
|
| 401 |
+
|
| 402 |
+
parts.append(f"""
|
| 403 |
+
<div style="background: linear-gradient(135deg, #fef2f2 0%, #fee2e2 100%); border: 1px solid #fecaca; border-radius: 12px; padding: 16px; margin-bottom: 16px;">
|
| 404 |
+
<h4 style="margin: 0 0 12px 0; color: #dc2626; display: flex; align-items: center; gap: 8px;">
|
| 405 |
+
β οΈ Critical Alerts
|
| 406 |
+
</h4>
|
| 407 |
+
<ul style="margin: 0; padding-left: 20px; color: #991b1b;">{alert_items}</ul>
|
| 408 |
+
</div>
|
| 409 |
+
""")
|
| 410 |
|
| 411 |
# Key Findings
|
| 412 |
findings = response.get("key_findings", [])
|
| 413 |
if findings:
|
| 414 |
+
finding_items = "".join([f'<li style="margin-bottom: 8px;">{f}</li>' for f in findings[:5]])
|
| 415 |
+
parts.append(f"""
|
| 416 |
+
<div style="background: #f8fafc; border-radius: 12px; padding: 16px; margin-bottom: 16px;">
|
| 417 |
+
<h4 style="margin: 0 0 12px 0; color: #1e3a5f;">π Key Findings</h4>
|
| 418 |
+
<ul style="margin: 0; padding-left: 20px; color: #475569;">{finding_items}</ul>
|
| 419 |
+
</div>
|
| 420 |
+
""")
|
| 421 |
|
| 422 |
+
# Biomarker Flags - as a visual grid
|
| 423 |
flags = response.get("biomarker_flags", [])
|
| 424 |
if flags:
|
| 425 |
+
flag_cards = ""
|
| 426 |
for flag in flags[:8]:
|
| 427 |
if isinstance(flag, dict):
|
| 428 |
name = flag.get("biomarker", "Unknown")
|
| 429 |
status = flag.get("status", "normal")
|
| 430 |
value = flag.get("value", "N/A")
|
| 431 |
+
|
| 432 |
+
status_styles = {
|
| 433 |
+
"critical": ("π΄", "#dc2626", "#fef2f2"),
|
| 434 |
+
"abnormal": ("π‘", "#ca8a04", "#fefce8"),
|
| 435 |
+
"normal": ("π’", "#16a34a", "#f0fdf4")
|
| 436 |
+
}
|
| 437 |
+
s_emoji, s_color, s_bg = status_styles.get(status, status_styles["normal"])
|
| 438 |
+
|
| 439 |
+
flag_cards += f"""
|
| 440 |
+
<div style="background: {s_bg}; border: 1px solid {s_color}33; border-radius: 8px; padding: 12px; text-align: center;">
|
| 441 |
+
<div style="font-size: 1.2em;">{s_emoji}</div>
|
| 442 |
+
<div style="font-weight: 600; color: #1e3a5f; margin: 4px 0;">{name}</div>
|
| 443 |
+
<div style="font-size: 1.1em; color: {s_color};">{value}</div>
|
| 444 |
+
<div style="font-size: 0.8em; color: #64748b; text-transform: uppercase;">{status}</div>
|
| 445 |
+
</div>
|
| 446 |
+
"""
|
| 447 |
+
|
| 448 |
+
parts.append(f"""
|
| 449 |
+
<div style="margin-bottom: 16px;">
|
| 450 |
+
<h4 style="margin: 0 0 12px 0; color: #1e3a5f;">π Biomarker Analysis</h4>
|
| 451 |
+
<div style="display: grid; grid-template-columns: repeat(auto-fit, minmax(100px, 1fr)); gap: 12px;">
|
| 452 |
+
{flag_cards}
|
| 453 |
+
</div>
|
| 454 |
+
</div>
|
| 455 |
+
""")
|
| 456 |
|
| 457 |
+
# Recommendations - organized sections
|
| 458 |
recs = response.get("recommendations", {})
|
| 459 |
if recs:
|
| 460 |
+
rec_sections = ""
|
| 461 |
|
| 462 |
immediate = recs.get("immediate_actions", [])
|
| 463 |
if immediate:
|
| 464 |
+
items = "".join([f'<li style="margin-bottom: 6px;">{a}</li>' for a in immediate[:3]])
|
| 465 |
+
rec_sections += f"""
|
| 466 |
+
<div style="margin-bottom: 12px;">
|
| 467 |
+
<h5 style="margin: 0 0 8px 0; color: #dc2626;">π¨ Immediate Actions</h5>
|
| 468 |
+
<ul style="margin: 0; padding-left: 20px; color: #475569;">{items}</ul>
|
| 469 |
+
</div>
|
| 470 |
+
"""
|
| 471 |
|
| 472 |
lifestyle = recs.get("lifestyle_modifications", [])
|
| 473 |
if lifestyle:
|
| 474 |
+
items = "".join([f'<li style="margin-bottom: 6px;">{m}</li>' for m in lifestyle[:3]])
|
| 475 |
+
rec_sections += f"""
|
| 476 |
+
<div style="margin-bottom: 12px;">
|
| 477 |
+
<h5 style="margin: 0 0 8px 0; color: #16a34a;">πΏ Lifestyle Modifications</h5>
|
| 478 |
+
<ul style="margin: 0; padding-left: 20px; color: #475569;">{items}</ul>
|
| 479 |
+
</div>
|
| 480 |
+
"""
|
| 481 |
|
| 482 |
followup = recs.get("follow_up", [])
|
| 483 |
if followup:
|
| 484 |
+
items = "".join([f'<li style="margin-bottom: 6px;">{f}</li>' for f in followup[:3]])
|
| 485 |
+
rec_sections += f"""
|
| 486 |
+
<div>
|
| 487 |
+
<h5 style="margin: 0 0 8px 0; color: #2563eb;">π
Follow-up</h5>
|
| 488 |
+
<ul style="margin: 0; padding-left: 20px; color: #475569;">{items}</ul>
|
| 489 |
+
</div>
|
| 490 |
+
"""
|
| 491 |
+
|
| 492 |
+
if rec_sections:
|
| 493 |
+
parts.append(f"""
|
| 494 |
+
<div style="background: linear-gradient(135deg, #f0f9ff 0%, #e0f2fe 100%); border-radius: 12px; padding: 16px; margin-bottom: 16px;">
|
| 495 |
+
<h4 style="margin: 0 0 16px 0; color: #1e3a5f;">π‘ Recommendations</h4>
|
| 496 |
+
{rec_sections}
|
| 497 |
+
</div>
|
| 498 |
+
""")
|
| 499 |
|
| 500 |
# Disease Explanation
|
| 501 |
explanation = response.get("disease_explanation", {})
|
| 502 |
if explanation and isinstance(explanation, dict):
|
|
|
|
|
|
|
| 503 |
pathophys = explanation.get("pathophysiology", "")
|
| 504 |
if pathophys:
|
| 505 |
+
parts.append(f"""
|
| 506 |
+
<div style="background: #f8fafc; border-radius: 12px; padding: 16px; margin-bottom: 16px;">
|
| 507 |
+
<h4 style="margin: 0 0 12px 0; color: #1e3a5f;">π Understanding Your Results</h4>
|
| 508 |
+
<p style="margin: 0; color: #475569; line-height: 1.6;">{pathophys[:600]}{'...' if len(pathophys) > 600 else ''}</p>
|
| 509 |
+
</div>
|
| 510 |
+
""")
|
| 511 |
|
| 512 |
# Conversational Summary
|
| 513 |
conv_summary = response.get("conversational_summary", "")
|
| 514 |
if conv_summary:
|
| 515 |
+
parts.append(f"""
|
| 516 |
+
<div style="background: linear-gradient(135deg, #faf5ff 0%, #f3e8ff 100%); border-radius: 12px; padding: 16px; margin-bottom: 16px;">
|
| 517 |
+
<h4 style="margin: 0 0 12px 0; color: #7c3aed;">π Summary</h4>
|
| 518 |
+
<p style="margin: 0; color: #475569; line-height: 1.6;">{conv_summary[:1000]}</p>
|
| 519 |
+
</div>
|
| 520 |
+
""")
|
| 521 |
|
| 522 |
# Footer
|
| 523 |
+
parts.append(f"""
|
| 524 |
+
<div style="border-top: 1px solid #e2e8f0; padding-top: 16px; margin-top: 8px; text-align: center;">
|
| 525 |
+
<p style="margin: 0 0 8px 0; color: #94a3b8; font-size: 0.9em;">
|
| 526 |
+
β¨ Analysis completed in <strong>{elapsed:.1f}s</strong> using Agentic RagBot
|
| 527 |
+
</p>
|
| 528 |
+
<p style="margin: 0; color: #f59e0b; font-size: 0.85em;">
|
| 529 |
+
β οΈ <em>This is for informational purposes only. Consult a healthcare professional for medical advice.</em>
|
| 530 |
+
</p>
|
| 531 |
+
</div>
|
| 532 |
+
""")
|
| 533 |
|
| 534 |
return "\n".join(parts)
|
| 535 |
|
|
|
|
| 538 |
# Gradio Interface
|
| 539 |
# ---------------------------------------------------------------------------
|
| 540 |
|
| 541 |
+
# Custom CSS for modern medical UI
|
| 542 |
+
CUSTOM_CSS = """
|
| 543 |
+
/* Global Styles */
|
| 544 |
+
.gradio-container {
|
| 545 |
+
max-width: 1400px !important;
|
| 546 |
+
margin: auto !important;
|
| 547 |
+
font-family: 'Inter', -apple-system, BlinkMacSystemFont, sans-serif !important;
|
| 548 |
+
}
|
| 549 |
+
|
| 550 |
+
/* Hide footer */
|
| 551 |
+
footer { display: none !important; }
|
| 552 |
+
|
| 553 |
+
/* Header styling */
|
| 554 |
+
.header-container {
|
| 555 |
+
background: linear-gradient(135deg, #1e3a5f 0%, #2d5a87 50%, #3d7ab5 100%);
|
| 556 |
+
border-radius: 16px;
|
| 557 |
+
padding: 32px;
|
| 558 |
+
margin-bottom: 24px;
|
| 559 |
+
color: white;
|
| 560 |
+
text-align: center;
|
| 561 |
+
box-shadow: 0 8px 32px rgba(30, 58, 95, 0.3);
|
| 562 |
+
}
|
| 563 |
+
|
| 564 |
+
.header-container h1 {
|
| 565 |
+
margin: 0 0 12px 0;
|
| 566 |
+
font-size: 2.5em;
|
| 567 |
+
font-weight: 700;
|
| 568 |
+
text-shadow: 0 2px 4px rgba(0,0,0,0.2);
|
| 569 |
+
}
|
| 570 |
+
|
| 571 |
+
.header-container p {
|
| 572 |
+
margin: 0;
|
| 573 |
+
opacity: 0.95;
|
| 574 |
+
font-size: 1.1em;
|
| 575 |
+
}
|
| 576 |
+
|
| 577 |
+
/* Input panel */
|
| 578 |
+
.input-panel {
|
| 579 |
+
background: linear-gradient(180deg, #f8fafc 0%, #f1f5f9 100%);
|
| 580 |
+
border-radius: 16px;
|
| 581 |
+
padding: 24px;
|
| 582 |
+
border: 1px solid #e2e8f0;
|
| 583 |
+
box-shadow: 0 4px 16px rgba(0, 0, 0, 0.05);
|
| 584 |
+
}
|
| 585 |
+
|
| 586 |
+
/* Output panel */
|
| 587 |
+
.output-panel {
|
| 588 |
+
background: white;
|
| 589 |
+
border-radius: 16px;
|
| 590 |
+
padding: 24px;
|
| 591 |
+
border: 1px solid #e2e8f0;
|
| 592 |
+
box-shadow: 0 4px 16px rgba(0, 0, 0, 0.05);
|
| 593 |
+
min-height: 500px;
|
| 594 |
+
}
|
| 595 |
+
|
| 596 |
+
/* Status badges */
|
| 597 |
+
.status-success {
|
| 598 |
+
background: linear-gradient(135deg, #10b981 0%, #059669 100%);
|
| 599 |
+
color: white;
|
| 600 |
+
padding: 12px 20px;
|
| 601 |
+
border-radius: 10px;
|
| 602 |
+
font-weight: 600;
|
| 603 |
+
display: inline-block;
|
| 604 |
+
}
|
| 605 |
+
|
| 606 |
+
.status-error {
|
| 607 |
+
background: linear-gradient(135deg, #ef4444 0%, #dc2626 100%);
|
| 608 |
+
color: white;
|
| 609 |
+
padding: 12px 20px;
|
| 610 |
+
border-radius: 10px;
|
| 611 |
+
font-weight: 600;
|
| 612 |
+
}
|
| 613 |
+
|
| 614 |
+
.status-warning {
|
| 615 |
+
background: linear-gradient(135deg, #f59e0b 0%, #d97706 100%);
|
| 616 |
+
color: white;
|
| 617 |
+
padding: 12px 20px;
|
| 618 |
+
border-radius: 10px;
|
| 619 |
+
font-weight: 600;
|
| 620 |
+
}
|
| 621 |
+
|
| 622 |
+
/* Info banner */
|
| 623 |
+
.info-banner {
|
| 624 |
+
background: linear-gradient(135deg, #dbeafe 0%, #bfdbfe 100%);
|
| 625 |
+
border: 1px solid #93c5fd;
|
| 626 |
+
border-radius: 12px;
|
| 627 |
+
padding: 16px 20px;
|
| 628 |
+
margin: 16px 0;
|
| 629 |
+
display: flex;
|
| 630 |
+
align-items: center;
|
| 631 |
+
gap: 12px;
|
| 632 |
+
}
|
| 633 |
+
|
| 634 |
+
.info-banner-icon {
|
| 635 |
+
font-size: 1.5em;
|
| 636 |
+
}
|
| 637 |
+
|
| 638 |
+
/* Agent cards */
|
| 639 |
+
.agent-grid {
|
| 640 |
+
display: grid;
|
| 641 |
+
grid-template-columns: repeat(auto-fit, minmax(280px, 1fr));
|
| 642 |
+
gap: 16px;
|
| 643 |
+
margin: 20px 0;
|
| 644 |
+
}
|
| 645 |
+
|
| 646 |
+
.agent-card {
|
| 647 |
+
background: linear-gradient(135deg, #ffffff 0%, #f8fafc 100%);
|
| 648 |
+
border: 1px solid #e2e8f0;
|
| 649 |
+
border-radius: 12px;
|
| 650 |
+
padding: 20px;
|
| 651 |
+
transition: all 0.3s ease;
|
| 652 |
+
box-shadow: 0 2px 8px rgba(0, 0, 0, 0.04);
|
| 653 |
+
}
|
| 654 |
+
|
| 655 |
+
.agent-card:hover {
|
| 656 |
+
transform: translateY(-2px);
|
| 657 |
+
box-shadow: 0 8px 24px rgba(0, 0, 0, 0.1);
|
| 658 |
+
border-color: #3b82f6;
|
| 659 |
+
}
|
| 660 |
+
|
| 661 |
+
.agent-card h4 {
|
| 662 |
+
margin: 0 0 8px 0;
|
| 663 |
+
color: #1e3a5f;
|
| 664 |
+
font-size: 1em;
|
| 665 |
+
}
|
| 666 |
+
|
| 667 |
+
.agent-card p {
|
| 668 |
+
margin: 0;
|
| 669 |
+
color: #64748b;
|
| 670 |
+
font-size: 0.9em;
|
| 671 |
+
}
|
| 672 |
+
|
| 673 |
+
/* Example buttons */
|
| 674 |
+
.example-btn {
|
| 675 |
+
background: #f1f5f9;
|
| 676 |
+
border: 1px solid #cbd5e1;
|
| 677 |
+
border-radius: 8px;
|
| 678 |
+
padding: 10px 14px;
|
| 679 |
+
cursor: pointer;
|
| 680 |
+
transition: all 0.2s ease;
|
| 681 |
+
text-align: left;
|
| 682 |
+
font-size: 0.85em;
|
| 683 |
+
}
|
| 684 |
+
|
| 685 |
+
.example-btn:hover {
|
| 686 |
+
background: #e2e8f0;
|
| 687 |
+
border-color: #94a3b8;
|
| 688 |
+
}
|
| 689 |
+
|
| 690 |
+
/* Buttons */
|
| 691 |
+
.primary-btn {
|
| 692 |
+
background: linear-gradient(135deg, #3b82f6 0%, #2563eb 100%) !important;
|
| 693 |
+
border: none !important;
|
| 694 |
+
border-radius: 12px !important;
|
| 695 |
+
padding: 14px 28px !important;
|
| 696 |
+
font-weight: 600 !important;
|
| 697 |
+
font-size: 1.1em !important;
|
| 698 |
+
box-shadow: 0 4px 14px rgba(59, 130, 246, 0.4) !important;
|
| 699 |
+
transition: all 0.3s ease !important;
|
| 700 |
+
}
|
| 701 |
+
|
| 702 |
+
.primary-btn:hover {
|
| 703 |
+
transform: translateY(-2px) !important;
|
| 704 |
+
box-shadow: 0 6px 20px rgba(59, 130, 246, 0.5) !important;
|
| 705 |
+
}
|
| 706 |
+
|
| 707 |
+
.secondary-btn {
|
| 708 |
+
background: #f1f5f9 !important;
|
| 709 |
+
border: 1px solid #cbd5e1 !important;
|
| 710 |
+
border-radius: 12px !important;
|
| 711 |
+
padding: 14px 28px !important;
|
| 712 |
+
font-weight: 500 !important;
|
| 713 |
+
transition: all 0.2s ease !important;
|
| 714 |
+
}
|
| 715 |
+
|
| 716 |
+
.secondary-btn:hover {
|
| 717 |
+
background: #e2e8f0 !important;
|
| 718 |
+
}
|
| 719 |
+
|
| 720 |
+
/* Results tabs */
|
| 721 |
+
.results-tabs {
|
| 722 |
+
border-radius: 12px;
|
| 723 |
+
overflow: hidden;
|
| 724 |
+
}
|
| 725 |
+
|
| 726 |
+
/* Disclaimer */
|
| 727 |
+
.disclaimer {
|
| 728 |
+
background: linear-gradient(135deg, #fef3c7 0%, #fde68a 100%);
|
| 729 |
+
border: 1px solid #fbbf24;
|
| 730 |
+
border-radius: 12px;
|
| 731 |
+
padding: 16px 20px;
|
| 732 |
+
margin-top: 24px;
|
| 733 |
+
font-size: 0.9em;
|
| 734 |
+
}
|
| 735 |
+
|
| 736 |
+
/* Feature badges */
|
| 737 |
+
.feature-badge {
|
| 738 |
+
display: inline-block;
|
| 739 |
+
background: linear-gradient(135deg, #e0e7ff 0%, #c7d2fe 100%);
|
| 740 |
+
color: #4338ca;
|
| 741 |
+
padding: 6px 12px;
|
| 742 |
+
border-radius: 20px;
|
| 743 |
+
font-size: 0.8em;
|
| 744 |
+
font-weight: 600;
|
| 745 |
+
margin: 4px;
|
| 746 |
+
}
|
| 747 |
+
|
| 748 |
+
/* Section titles */
|
| 749 |
+
.section-title {
|
| 750 |
+
font-size: 1.25em;
|
| 751 |
+
font-weight: 600;
|
| 752 |
+
color: #1e3a5f;
|
| 753 |
+
margin-bottom: 16px;
|
| 754 |
+
display: flex;
|
| 755 |
+
align-items: center;
|
| 756 |
+
gap: 8px;
|
| 757 |
+
}
|
| 758 |
+
|
| 759 |
+
/* Animations */
|
| 760 |
+
@keyframes pulse {
|
| 761 |
+
0%, 100% { opacity: 1; }
|
| 762 |
+
50% { opacity: 0.7; }
|
| 763 |
+
}
|
| 764 |
+
|
| 765 |
+
.analyzing {
|
| 766 |
+
animation: pulse 1.5s ease-in-out infinite;
|
| 767 |
+
}
|
| 768 |
+
"""
|
| 769 |
+
|
| 770 |
+
|
| 771 |
def create_demo() -> gr.Blocks:
|
| 772 |
+
"""Create the Gradio Blocks interface with modern medical UI."""
|
| 773 |
|
| 774 |
with gr.Blocks(
|
| 775 |
+
title="Agentic RagBot - Medical Biomarker Analysis",
|
| 776 |
+
theme=gr.themes.Soft(
|
| 777 |
+
primary_hue=gr.themes.colors.blue,
|
| 778 |
+
secondary_hue=gr.themes.colors.slate,
|
| 779 |
+
neutral_hue=gr.themes.colors.slate,
|
| 780 |
+
font=gr.themes.GoogleFont("Inter"),
|
| 781 |
+
font_mono=gr.themes.GoogleFont("JetBrains Mono"),
|
| 782 |
+
).set(
|
| 783 |
+
body_background_fill="linear-gradient(135deg, #f0f4f8 0%, #e2e8f0 100%)",
|
| 784 |
+
block_background_fill="white",
|
| 785 |
+
block_border_width="0px",
|
| 786 |
+
block_shadow="0 4px 16px rgba(0, 0, 0, 0.08)",
|
| 787 |
+
block_radius="16px",
|
| 788 |
+
button_primary_background_fill="linear-gradient(135deg, #3b82f6 0%, #2563eb 100%)",
|
| 789 |
+
button_primary_background_fill_hover="linear-gradient(135deg, #2563eb 0%, #1d4ed8 100%)",
|
| 790 |
+
button_primary_text_color="white",
|
| 791 |
+
button_primary_shadow="0 4px 14px rgba(59, 130, 246, 0.4)",
|
| 792 |
+
input_background_fill="#f8fafc",
|
| 793 |
+
input_border_width="1px",
|
| 794 |
+
input_border_color="#e2e8f0",
|
| 795 |
+
input_radius="12px",
|
| 796 |
+
),
|
| 797 |
+
css=CUSTOM_CSS,
|
| 798 |
) as demo:
|
| 799 |
|
| 800 |
+
# ===== HEADER =====
|
| 801 |
+
gr.HTML("""
|
| 802 |
+
<div class="header-container">
|
| 803 |
+
<h1>π₯ Agentic RagBot</h1>
|
| 804 |
+
<p>Multi-Agent RAG System for Medical Biomarker Analysis</p>
|
| 805 |
+
<div style="margin-top: 16px;">
|
| 806 |
+
<span class="feature-badge">π€ 6 AI Agents</span>
|
| 807 |
+
<span class="feature-badge">π RAG-Powered</span>
|
| 808 |
+
<span class="feature-badge">β‘ Real-time Analysis</span>
|
| 809 |
+
<span class="feature-badge">π¬ Evidence-Based</span>
|
| 810 |
+
</div>
|
| 811 |
+
</div>
|
| 812 |
""")
|
| 813 |
|
| 814 |
+
# ===== API KEY INFO =====
|
| 815 |
+
gr.HTML("""
|
| 816 |
+
<div class="info-banner">
|
| 817 |
+
<span class="info-banner-icon">π</span>
|
| 818 |
+
<div>
|
| 819 |
+
<strong>Setup Required:</strong> Add your <code>GROQ_API_KEY</code> or
|
| 820 |
+
<code>GOOGLE_API_KEY</code> in Space Settings β Secrets to enable analysis.
|
| 821 |
+
<a href="https://console.groq.com/keys" target="_blank" style="color: #2563eb;">Get free Groq key β</a>
|
| 822 |
+
</div>
|
| 823 |
</div>
|
| 824 |
""")
|
| 825 |
|
| 826 |
+
# ===== MAIN CONTENT =====
|
| 827 |
+
with gr.Row(equal_height=False):
|
| 828 |
+
|
| 829 |
+
# ----- LEFT PANEL: INPUT -----
|
| 830 |
+
with gr.Column(scale=2, min_width=400):
|
| 831 |
+
gr.HTML('<div class="section-title">π Enter Your Biomarkers</div>')
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 832 |
|
| 833 |
+
with gr.Group():
|
| 834 |
+
input_text = gr.Textbox(
|
| 835 |
+
label="",
|
| 836 |
+
placeholder="Enter biomarkers in any format:\n\nβ’ Glucose: 140, HbA1c: 7.5, Cholesterol: 210\nβ’ My glucose is 140 and HbA1c is 7.5\nβ’ {\"Glucose\": 140, \"HbA1c\": 7.5}",
|
| 837 |
+
lines=6,
|
| 838 |
+
max_lines=12,
|
| 839 |
+
show_label=False,
|
| 840 |
+
)
|
| 841 |
+
|
| 842 |
+
with gr.Row():
|
| 843 |
+
analyze_btn = gr.Button(
|
| 844 |
+
"π¬ Analyze Biomarkers",
|
| 845 |
+
variant="primary",
|
| 846 |
+
size="lg",
|
| 847 |
+
scale=3,
|
| 848 |
+
)
|
| 849 |
+
clear_btn = gr.Button(
|
| 850 |
+
"ποΈ Clear",
|
| 851 |
+
variant="secondary",
|
| 852 |
+
size="lg",
|
| 853 |
+
scale=1,
|
| 854 |
+
)
|
| 855 |
|
| 856 |
+
# Status display
|
| 857 |
status_output = gr.Markdown(
|
| 858 |
+
value="",
|
| 859 |
elem_classes="status-box"
|
| 860 |
)
|
| 861 |
|
| 862 |
+
# Quick Examples
|
| 863 |
+
gr.HTML('<div class="section-title" style="margin-top: 24px;">β‘ Quick Examples</div>')
|
| 864 |
+
gr.HTML('<p style="color: #64748b; font-size: 0.9em; margin-bottom: 12px;">Click any example to load it instantly</p>')
|
| 865 |
|
| 866 |
examples = gr.Examples(
|
| 867 |
examples=[
|
|
|
|
| 869 |
["Glucose: 95, HbA1c: 5.4, Cholesterol: 180, HDL: 55, LDL: 100"],
|
| 870 |
["Hemoglobin: 9.5, Iron: 40, Ferritin: 15"],
|
| 871 |
["TSH: 8.5, T4: 4.0, T3: 80"],
|
| 872 |
+
["Creatinine: 2.5, BUN: 45, eGFR: 35"],
|
| 873 |
],
|
| 874 |
inputs=input_text,
|
| 875 |
+
label="",
|
| 876 |
)
|
| 877 |
+
|
| 878 |
+
# Supported Biomarkers
|
| 879 |
+
with gr.Accordion("π Supported Biomarkers", open=False):
|
| 880 |
+
gr.HTML("""
|
| 881 |
+
<div style="display: grid; grid-template-columns: repeat(2, 1fr); gap: 16px; padding: 12px;">
|
| 882 |
+
<div>
|
| 883 |
+
<h4 style="color: #1e3a5f; margin: 0 0 8px 0;">π©Έ Diabetes</h4>
|
| 884 |
+
<p style="color: #64748b; font-size: 0.85em; margin: 0;">Glucose, HbA1c, Fasting Glucose, Insulin</p>
|
| 885 |
+
</div>
|
| 886 |
+
<div>
|
| 887 |
+
<h4 style="color: #1e3a5f; margin: 0 0 8px 0;">β€οΈ Cardiovascular</h4>
|
| 888 |
+
<p style="color: #64748b; font-size: 0.85em; margin: 0;">Cholesterol, LDL, HDL, Triglycerides</p>
|
| 889 |
+
</div>
|
| 890 |
+
<div>
|
| 891 |
+
<h4 style="color: #1e3a5f; margin: 0 0 8px 0;">π« Kidney</h4>
|
| 892 |
+
<p style="color: #64748b; font-size: 0.85em; margin: 0;">Creatinine, BUN, eGFR, Uric Acid</p>
|
| 893 |
+
</div>
|
| 894 |
+
<div>
|
| 895 |
+
<h4 style="color: #1e3a5f; margin: 0 0 8px 0;">𦴠Liver</h4>
|
| 896 |
+
<p style="color: #64748b; font-size: 0.85em; margin: 0;">ALT, AST, Bilirubin, Albumin</p>
|
| 897 |
+
</div>
|
| 898 |
+
<div>
|
| 899 |
+
<h4 style="color: #1e3a5f; margin: 0 0 8px 0;">π¦ Thyroid</h4>
|
| 900 |
+
<p style="color: #64748b; font-size: 0.85em; margin: 0;">TSH, T3, T4, Free T4</p>
|
| 901 |
+
</div>
|
| 902 |
+
<div>
|
| 903 |
+
<h4 style="color: #1e3a5f; margin: 0 0 8px 0;">π Blood</h4>
|
| 904 |
+
<p style="color: #64748b; font-size: 0.85em; margin: 0;">Hemoglobin, WBC, RBC, Platelets</p>
|
| 905 |
+
</div>
|
| 906 |
+
</div>
|
| 907 |
+
""")
|
| 908 |
|
| 909 |
+
# ----- RIGHT PANEL: RESULTS -----
|
| 910 |
+
with gr.Column(scale=3, min_width=500):
|
| 911 |
+
gr.HTML('<div class="section-title">π Analysis Results</div>')
|
| 912 |
|
| 913 |
+
with gr.Tabs() as result_tabs:
|
| 914 |
+
with gr.Tab("π Summary", id="summary"):
|
| 915 |
summary_output = gr.Markdown(
|
| 916 |
+
value="""
|
| 917 |
+
<div style="text-align: center; padding: 60px 20px; color: #94a3b8;">
|
| 918 |
+
<div style="font-size: 4em; margin-bottom: 16px;">π¬</div>
|
| 919 |
+
<h3 style="color: #64748b; font-weight: 500;">Ready to Analyze</h3>
|
| 920 |
+
<p>Enter your biomarkers on the left and click <strong>Analyze</strong> to get your personalized health insights.</p>
|
| 921 |
+
</div>
|
| 922 |
+
""",
|
| 923 |
+
elem_classes="summary-output"
|
| 924 |
)
|
| 925 |
|
| 926 |
+
with gr.Tab("π Detailed JSON", id="json"):
|
| 927 |
details_output = gr.Code(
|
| 928 |
+
label="",
|
| 929 |
language="json",
|
| 930 |
+
lines=30,
|
| 931 |
+
show_label=False,
|
| 932 |
)
|
| 933 |
|
| 934 |
+
# ===== HOW IT WORKS =====
|
| 935 |
+
gr.HTML('<div class="section-title" style="margin-top: 32px;">π€ How It Works</div>')
|
| 936 |
+
|
| 937 |
+
gr.HTML("""
|
| 938 |
+
<div class="agent-grid">
|
| 939 |
+
<div class="agent-card">
|
| 940 |
+
<h4>π¬ Biomarker Analyzer</h4>
|
| 941 |
+
<p>Validates your biomarker values against clinical reference ranges and flags any abnormalities.</p>
|
| 942 |
+
</div>
|
| 943 |
+
<div class="agent-card">
|
| 944 |
+
<h4>π Disease Explainer</h4>
|
| 945 |
+
<p>Uses RAG to retrieve relevant medical literature and explain potential conditions.</p>
|
| 946 |
+
</div>
|
| 947 |
+
<div class="agent-card">
|
| 948 |
+
<h4>π Biomarker Linker</h4>
|
| 949 |
+
<p>Connects your specific biomarker patterns to disease predictions with clinical evidence.</p>
|
| 950 |
+
</div>
|
| 951 |
+
<div class="agent-card">
|
| 952 |
+
<h4>π Clinical Guidelines</h4>
|
| 953 |
+
<p>Retrieves evidence-based recommendations from 750+ pages of medical guidelines.</p>
|
| 954 |
+
</div>
|
| 955 |
+
<div class="agent-card">
|
| 956 |
+
<h4>β
Confidence Assessor</h4>
|
| 957 |
+
<p>Evaluates the reliability of findings based on data quality and evidence strength.</p>
|
| 958 |
+
</div>
|
| 959 |
+
<div class="agent-card">
|
| 960 |
+
<h4>π Response Synthesizer</h4>
|
| 961 |
+
<p>Compiles all insights into a comprehensive, easy-to-understand patient report.</p>
|
| 962 |
+
</div>
|
| 963 |
+
</div>
|
| 964 |
+
""")
|
| 965 |
+
|
| 966 |
+
# ===== DISCLAIMER =====
|
| 967 |
+
gr.HTML("""
|
| 968 |
+
<div class="disclaimer">
|
| 969 |
+
<strong>β οΈ Medical Disclaimer:</strong> This tool is for <strong>informational purposes only</strong>
|
| 970 |
+
and does not replace professional medical advice, diagnosis, or treatment. Always consult a qualified
|
| 971 |
+
healthcare provider with questions regarding a medical condition. The AI analysis is based on general
|
| 972 |
+
clinical guidelines and may not account for your specific medical history.
|
| 973 |
+
</div>
|
| 974 |
+
""")
|
| 975 |
+
|
| 976 |
+
# ===== FOOTER =====
|
| 977 |
+
gr.HTML("""
|
| 978 |
+
<div style="text-align: center; padding: 24px; color: #94a3b8; font-size: 0.85em; margin-top: 24px;">
|
| 979 |
+
<p>Built with β€οΈ using
|
| 980 |
+
<a href="https://langchain-ai.github.io/langgraph/" target="_blank" style="color: #3b82f6;">LangGraph</a>,
|
| 981 |
+
<a href="https://faiss.ai/" target="_blank" style="color: #3b82f6;">FAISS</a>, and
|
| 982 |
+
<a href="https://gradio.app/" target="_blank" style="color: #3b82f6;">Gradio</a>
|
| 983 |
+
</p>
|
| 984 |
+
<p style="margin-top: 8px;">Powered by <strong>Groq</strong> (LLaMA 3.3-70B) β’ Open Source on GitHub</p>
|
| 985 |
+
</div>
|
| 986 |
+
""")
|
| 987 |
+
|
| 988 |
+
# ===== EVENT HANDLERS =====
|
| 989 |
analyze_btn.click(
|
| 990 |
fn=analyze_biomarkers,
|
| 991 |
inputs=[input_text],
|
|
|
|
| 994 |
)
|
| 995 |
|
| 996 |
clear_btn.click(
|
| 997 |
+
fn=lambda: ("", """
|
| 998 |
+
<div style="text-align: center; padding: 60px 20px; color: #94a3b8;">
|
| 999 |
+
<div style="font-size: 4em; margin-bottom: 16px;">π¬</div>
|
| 1000 |
+
<h3 style="color: #64748b; font-weight: 500;">Ready to Analyze</h3>
|
| 1001 |
+
<p>Enter your biomarkers on the left and click <strong>Analyze</strong> to get your personalized health insights.</p>
|
| 1002 |
+
</div>
|
| 1003 |
+
""", "", ""),
|
| 1004 |
outputs=[input_text, summary_output, details_output, status_output],
|
| 1005 |
)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1006 |
|
| 1007 |
return demo
|
| 1008 |
|