Polish dashboard and add latent consistency views
Browse files- .gitignore +3 -0
- README.md +8 -13
- app.py +173 -103
- assets/styles.css +85 -78
- data/latent_samples.csv +0 -0
- requirements.txt +5 -5
.gitignore
ADDED
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__pycache__/
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*.pyc
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.cache/
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README.md
CHANGED
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@@ -6,18 +6,13 @@ app_port: 7860
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# BenchDash
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Interactive dashboard for the Tang Lab neural-behavioral
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- training time and memory summaries
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- neuron-SHAP and trial-Shapley perturbation summaries
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- model runtime coverage and container assignments
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The Space does not train the full benchmark model suite. Full reproduction is
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container-backed, while a curated Colab companion is the right place for a
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small interactive training demo.
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# BenchDash
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Interactive result dashboard for the Tang Lab neural-behavioral model
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benchmark.
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The dashboard summarizes exported benchmark results across five datasets and
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23 model variants, including clean prediction, count-noise robustness,
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cross-session latent consistency, attribution analyses, and compute cost.
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The bundled files in `data/` are lightweight summary exports for interactive
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inspection. The full benchmark artifacts and reproduction workflow live in the
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main benchmark repository.
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app.py
CHANGED
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@@ -8,6 +8,7 @@ import pandas as pd
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import plotly.express as px
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import plotly.graph_objects as go
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from dash import Dash, Input, Output, dash_table, dcc, html
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DATA_DIR = Path(__file__).resolve().parent / "data"
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def load_csv(name: str) -> pd.DataFrame:
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path = DATA_DIR / name
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if not path.exists():
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return pd.read_csv(path)
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@@ -65,6 +66,7 @@ consistency = load_csv("consistency_summary.csv")
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scalability = load_csv("scalability_summary.csv")
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neuron_shap = load_csv("neuron_shap_summary.csv")
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trial_shapley = load_csv("trial_shapley_summary.csv")
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def present_rows(df: pd.DataFrame) -> pd.DataFrame:
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@@ -202,6 +204,127 @@ def parse_float_list(value: object) -> list[float]:
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return out
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def dataframe_table(
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table_id: str,
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*,
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@@ -254,10 +377,6 @@ def panel(title: str, *children, subtitle: str | None = None) -> html.Div:
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return html.Div([html.Div(heading, className="panel-heading"), *children], className="panel")
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def code_block(text: str) -> html.Pre:
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return html.Pre(html.Code(text), className="code-block")
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-
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present_prediction = present_rows(prediction)
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present_cells = len(present_prediction)
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total_cells = len(prediction)
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html.Div(
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[
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html.Div("Tang Lab", className="eyebrow"),
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html.H1("
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html.P(
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"
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"
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className="lede",
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),
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],
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html.Div(
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[
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stat_card("Models", str(len(MODELS)), "registered benchmark methods"),
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stat_card("Datasets", str(len(DATASETS)), "
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stat_card("
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stat_card(
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"
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f"{runtime_counts.get('cpu', 0)} CPU / {runtime_counts.get('gpu', 0)} GPU",
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"
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),
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],
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className="stat-grid",
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className="tabs",
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children=[
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dcc.Tab(
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label="
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value="prediction",
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children=[
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panel(
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"Clean Prediction",
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dcc.Graph(id="prediction-heatmap", config={"displayModeBar": False}),
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dcc.Graph(id="prediction-ranking", config={"displayModeBar": False}),
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dataframe_table("prediction-table"),
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subtitle="
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)
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],
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),
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value="consistency",
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children=[
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panel(
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"Cross-
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dcc.Graph(id="consistency-bars", config={"displayModeBar": False}),
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dcc.Graph(id="consistency-heatmap", config={"displayModeBar": False}),
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dataframe_table("consistency-table"),
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subtitle="
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)
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],
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),
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dcc.Graph(id="runtime-scatter", config={"displayModeBar": False}),
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dcc.Graph(id="memory-bars", config={"displayModeBar": False}),
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dataframe_table("runtime-table"),
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subtitle="Training time and memory are
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)
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],
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),
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],
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dcc.Tab(
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label="
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value="coverage",
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children=[
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panel(
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"Model Coverage",
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dcc.Graph(id="coverage-bars", config={"displayModeBar": False}),
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dataframe_table(
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"coverage-table",
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data=model_inventory.to_dict("records"),
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page_size=25,
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),
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subtitle="
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)
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],
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),
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dcc.Tab(
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label="Run It",
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value="run-it",
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children=[
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panel(
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"How This Is Meant To Be Used",
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html.Div(
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[
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html.Div(
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[
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html.H3("This Space"),
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html.P(
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"Use BenchDash to inspect paper-result summaries, compare models, "
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"check missingness, and understand runtime tradeoffs. It does not "
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"train the benchmark models on Hugging Face CPU hardware."
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),
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],
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className="route-card",
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),
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html.Div(
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[
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html.H3("Colab Companion"),
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html.P(
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"The right notebook target is a curated subset with clean Python installs: "
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"PCA, GPFA, SVC, XGBoost, CEBRA, and selected simple neural baselines."
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),
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],
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className="route-card",
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),
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html.Div(
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[
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html.H3("Full Benchmark"),
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html.P(
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"The full model suite should stay container-backed because several "
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"upstream methods have stale pins, MATLAB Runtime requirements, or "
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"CUDA/package coupling."
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),
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],
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className="route-card",
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),
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],
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className="route-grid",
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),
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html.H3("Example container commands"),
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code_block(
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"bin/submit_local --model pca --stage comprehensive -- --dataset local_regression\n"
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"bin/submit_gpu --model cebra --stage comprehensive -- --dataset monkey --session sub-C_ses-CO-20151104_behavior+ecephys\n"
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"bin/submit_cpu --model gpfa --stage stage1 -- --dataset monkey --session sub-C_ses-CO-20151104_behavior+ecephys"
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),
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html.H3("Canonical uploaded-data shape"),
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code_block(
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"neural: float array, shape (N_trials, T, N_neurons)\n"
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"trial_ids: array, shape (N_trials,)\n"
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"targets: task-dependent behavior labels or trajectories\n"
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"optional: condition_ids, consistency_ids"
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),
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subtitle="The upload/data-contract story belongs in the Colab and container path, not as the main dashboard affordance.",
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)
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],
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),
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heat_df["dataset_label"] = heat_df["dataset"].map(DATASET_LABELS).fillna(heat_df["dataset"])
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pivot = heat_df.pivot_table(index="model", columns="dataset_label", values="score", aggfunc="first")
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if not pivot.empty:
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-
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-
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dataset_order = [DATASET_LABELS.get(ds, ds) for ds in DATASETS if DATASET_LABELS.get(ds, ds) in pivot.columns]
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pivot = pivot.reindex(columns=dataset_order)
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text = pivot.map(lambda x: "" if pd.isna(x) else f"{x:.3f}") if not pivot.empty else pivot
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hovertemplate="model=%{y}<br>dataset=%{x}<br>score=%{z:.4f}<extra></extra>",
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)
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)
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heatmap.update_layout(title="Clean-score matrix")
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fig_layout(heatmap, height=max(430, 28 * len(pivot.index) + 170))
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rank_df = present_rows(df_all)
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"n_train_trials",
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"n_test_trials",
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"n_neurons",
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"source_path",
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]
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table_df = df_all[df_all["dataset"] == dataset].copy()
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for col in ["score", "latent_dim", "n_train_trials", "n_test_trials", "n_neurons"]:
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@@ -611,7 +671,7 @@ def update_robustness(dataset: str, models: list[str] | None):
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fig.update_yaxes(title=ordered_unique(df["metric"])[0] if "metric" in df else "score")
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fig_layout(fig, height=520)
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table_cols = ["model", "metric", "score_at_noise0", "score_at_max_noise", "raw_auc", "mean_score"
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table_df = df[table_cols].copy()
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for col in ["score_at_noise0", "score_at_max_noise", "raw_auc", "mean_score"]:
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table_df[col] = table_df[col].map(lambda v: compact_number(v))
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@app.callback(
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Output("consistency-bars", "figure"),
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Output("consistency-heatmap", "figure"),
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Output("consistency-table", "columns"),
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Input("model-filter", "value"),
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)
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def update_consistency(dataset: str, models: list[str] | None):
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df_all = filter_models(consistency, models)
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if "is_active_model" in df_all.columns:
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df_all = df_all[df_all["is_active_model"].astype(str).str.lower() == "true"]
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df = df_all[df_all["dataset"] == dataset].copy() if not df_all.empty else df_all
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if df.empty:
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cols = [{"name": c, "id": c} for c in ["model", "dataset", "
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return
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bar_df = df.sort_values("mean_r2_procrustes", ascending=True)
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bars = go.Figure(
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go.Bar(
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x=bar_df["
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y=bar_df["model"],
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orientation="h",
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marker=dict(color=bar_df["
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hovertemplate="model=%{y}<br>
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)
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)
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bars.update_layout(title=f"{DATASET_LABELS.get(dataset, dataset)} cross-session alignment")
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bars.update_xaxes(title="mean
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fig_layout(bars, height=max(420, 27 * len(bar_df) + 150))
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heat = df_all.copy()
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heat["dataset_label"] = heat["dataset"].map(DATASET_LABELS).fillna(heat["dataset"])
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pivot = heat.pivot_table(index="model", columns="dataset_label", values="
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if not pivot.empty:
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pivot = pivot.loc[pivot.mean(axis=1, skipna=True).sort_values(ascending=False).index]
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text = pivot.map(lambda x: "" if pd.isna(x) else f"{x:.2f}") if not pivot.empty else pivot
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"n_sessions",
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"latent_dim",
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"mean_r2",
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"mean_r2_procrustes",
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"n_pairwise",
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"scoring_modes",
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"source_path",
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]
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table_df = df[[c for c in table_cols if c in df.columns]].copy()
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for col in ["mean_r2", "
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if col in table_df:
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table_df[col] = table_df[col].map(lambda v: compact_number(v))
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return
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@app.callback(
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"inference_time_sec",
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"peak_ram_gb",
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"peak_vram_gb",
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"source_path",
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]
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table_df = df[table_cols].copy()
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for col in ["score", "training_time_sec", "inference_time_sec", "peak_ram_gb", "peak_vram_gb"]:
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@@ -821,11 +892,10 @@ def update_attribution(dataset: str, models: list[str] | None):
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"spearman_corr",
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"shap_mean_value",
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"shap_fraction_positive",
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"source_path",
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]
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table_df = nshap[[c for c in table_cols if c in nshap.columns]].copy()
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for col in table_df.columns:
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if col not in {"model", "dataset", "metric"
|
| 829 |
table_df[col] = table_df[col].map(lambda v: compact_number(v))
|
| 830 |
return nshap_fig, tshap_fig, [{"name": c, "id": c} for c in table_df.columns], table_df.to_dict("records")
|
| 831 |
|
|
|
|
| 8 |
import plotly.express as px
|
| 9 |
import plotly.graph_objects as go
|
| 10 |
from dash import Dash, Input, Output, dash_table, dcc, html
|
| 11 |
+
from plotly.subplots import make_subplots
|
| 12 |
|
| 13 |
|
| 14 |
DATA_DIR = Path(__file__).resolve().parent / "data"
|
|
|
|
| 56 |
def load_csv(name: str) -> pd.DataFrame:
|
| 57 |
path = DATA_DIR / name
|
| 58 |
if not path.exists():
|
| 59 |
+
raise FileNotFoundError(f"Missing bundled dashboard data: {path}")
|
| 60 |
return pd.read_csv(path)
|
| 61 |
|
| 62 |
|
|
|
|
| 66 |
scalability = load_csv("scalability_summary.csv")
|
| 67 |
neuron_shap = load_csv("neuron_shap_summary.csv")
|
| 68 |
trial_shapley = load_csv("trial_shapley_summary.csv")
|
| 69 |
+
latent_samples = load_csv("latent_samples.csv")
|
| 70 |
|
| 71 |
|
| 72 |
def present_rows(df: pd.DataFrame) -> pd.DataFrame:
|
|
|
|
| 204 |
return out
|
| 205 |
|
| 206 |
|
| 207 |
+
def latent_space_figure(dataset: str, models: list[str] | None) -> go.Figure:
|
| 208 |
+
if latent_samples.empty:
|
| 209 |
+
return empty_figure("Latent-space samples are not packaged for this build.")
|
| 210 |
+
|
| 211 |
+
chosen = selected_models(models)
|
| 212 |
+
df = latent_samples[
|
| 213 |
+
(latent_samples["dataset"].astype(str) == str(dataset))
|
| 214 |
+
& (latent_samples["model"].astype(str).isin(chosen))
|
| 215 |
+
].copy()
|
| 216 |
+
if df.empty:
|
| 217 |
+
label = DATASET_LABELS.get(dataset, dataset)
|
| 218 |
+
return empty_figure(f"Latent-space samples are not available for {label}.")
|
| 219 |
+
|
| 220 |
+
score_df = consistency.copy()
|
| 221 |
+
if "is_active_model" in score_df.columns:
|
| 222 |
+
score_df = score_df[score_df["is_active_model"].astype(str).str.lower() == "true"]
|
| 223 |
+
score_df = score_df[
|
| 224 |
+
(score_df["dataset"].astype(str) == str(dataset))
|
| 225 |
+
& (score_df["model"].astype(str).isin(df["model"].astype(str).unique()))
|
| 226 |
+
].copy()
|
| 227 |
+
if not score_df.empty:
|
| 228 |
+
score_df["mean_r2"] = pd.to_numeric(score_df["mean_r2"], errors="coerce")
|
| 229 |
+
plot_models = (
|
| 230 |
+
score_df.sort_values("mean_r2", ascending=False)["model"]
|
| 231 |
+
.astype(str)
|
| 232 |
+
.head(4)
|
| 233 |
+
.tolist()
|
| 234 |
+
)
|
| 235 |
+
else:
|
| 236 |
+
plot_models = sorted(df["model"].astype(str).unique())[:4]
|
| 237 |
+
|
| 238 |
+
plot_df = df[df["model"].astype(str).isin(plot_models)].copy()
|
| 239 |
+
for col in ["x", "y", "z"]:
|
| 240 |
+
plot_df[col] = pd.to_numeric(plot_df[col], errors="coerce")
|
| 241 |
+
plot_df = plot_df.dropna(subset=["x", "y", "z"])
|
| 242 |
+
if plot_df.empty:
|
| 243 |
+
return empty_figure("Latent-space samples are empty after filtering.")
|
| 244 |
+
|
| 245 |
+
score_lookup = (
|
| 246 |
+
score_df.set_index("model")["mean_r2"].to_dict() if not score_df.empty else {}
|
| 247 |
+
)
|
| 248 |
+
titles = []
|
| 249 |
+
for model in plot_models:
|
| 250 |
+
score = score_lookup.get(model)
|
| 251 |
+
suffix = "" if pd.isna(score) else f" R2={score:.2f}"
|
| 252 |
+
titles.append(f"{model}{suffix}")
|
| 253 |
+
|
| 254 |
+
n_cols = 2
|
| 255 |
+
n_rows = int(np.ceil(len(plot_models) / n_cols))
|
| 256 |
+
fig = make_subplots(
|
| 257 |
+
rows=n_rows,
|
| 258 |
+
cols=n_cols,
|
| 259 |
+
specs=[[{"type": "scene"} for _ in range(n_cols)] for _ in range(n_rows)],
|
| 260 |
+
subplot_titles=titles,
|
| 261 |
+
horizontal_spacing=0.03,
|
| 262 |
+
vertical_spacing=0.08,
|
| 263 |
+
)
|
| 264 |
+
palette = px.colors.qualitative.Set2 + px.colors.qualitative.Dark24
|
| 265 |
+
sessions = ordered_unique(plot_df["session_label"])
|
| 266 |
+
session_colors = {session: palette[idx % len(palette)] for idx, session in enumerate(sessions)}
|
| 267 |
+
|
| 268 |
+
for model_idx, model in enumerate(plot_models):
|
| 269 |
+
model_df = plot_df[plot_df["model"].astype(str) == model]
|
| 270 |
+
row = model_idx // n_cols + 1
|
| 271 |
+
col = model_idx % n_cols + 1
|
| 272 |
+
for session in sessions:
|
| 273 |
+
session_df = model_df[model_df["session_label"].astype(str) == session]
|
| 274 |
+
if session_df.empty:
|
| 275 |
+
continue
|
| 276 |
+
fig.add_trace(
|
| 277 |
+
go.Scatter3d(
|
| 278 |
+
x=session_df["x"],
|
| 279 |
+
y=session_df["y"],
|
| 280 |
+
z=session_df["z"],
|
| 281 |
+
mode="markers",
|
| 282 |
+
name=session,
|
| 283 |
+
legendgroup=session,
|
| 284 |
+
showlegend=model_idx == 0,
|
| 285 |
+
marker=dict(
|
| 286 |
+
size=2.4,
|
| 287 |
+
opacity=0.58,
|
| 288 |
+
color=session_colors[session],
|
| 289 |
+
),
|
| 290 |
+
customdata=np.stack(
|
| 291 |
+
[
|
| 292 |
+
session_df["model"].astype(str),
|
| 293 |
+
session_df["condition"].astype(str),
|
| 294 |
+
session_df["trial_index"].astype(str),
|
| 295 |
+
session_df["time_index"].astype(str),
|
| 296 |
+
],
|
| 297 |
+
axis=-1,
|
| 298 |
+
),
|
| 299 |
+
hovertemplate=(
|
| 300 |
+
"model=%{customdata[0]}<br>"
|
| 301 |
+
"session=%{fullData.name}<br>"
|
| 302 |
+
"condition=%{customdata[1]}<br>"
|
| 303 |
+
"trial=%{customdata[2]} time=%{customdata[3]}"
|
| 304 |
+
"<extra></extra>"
|
| 305 |
+
),
|
| 306 |
+
),
|
| 307 |
+
row=row,
|
| 308 |
+
col=col,
|
| 309 |
+
)
|
| 310 |
+
|
| 311 |
+
for idx in range(len(plot_models)):
|
| 312 |
+
scene_id = "scene" if idx == 0 else f"scene{idx + 1}"
|
| 313 |
+
fig.update_layout(
|
| 314 |
+
**{
|
| 315 |
+
scene_id: dict(
|
| 316 |
+
xaxis=dict(title="", showgrid=False, zeroline=False, showticklabels=False),
|
| 317 |
+
yaxis=dict(title="", showgrid=False, zeroline=False, showticklabels=False),
|
| 318 |
+
zaxis=dict(title="", showgrid=False, zeroline=False, showticklabels=False),
|
| 319 |
+
bgcolor="#ffffff",
|
| 320 |
+
camera=dict(eye=dict(x=1.55, y=1.55, z=1.1)),
|
| 321 |
+
)
|
| 322 |
+
}
|
| 323 |
+
)
|
| 324 |
+
fig.update_layout(title=f"{DATASET_LABELS.get(dataset, dataset)} latent-space samples")
|
| 325 |
+
return fig_layout(fig, height=720 if n_rows > 1 else 420)
|
| 326 |
+
|
| 327 |
+
|
| 328 |
def dataframe_table(
|
| 329 |
table_id: str,
|
| 330 |
*,
|
|
|
|
| 377 |
return html.Div([html.Div(heading, className="panel-heading"), *children], className="panel")
|
| 378 |
|
| 379 |
|
|
|
|
|
|
|
|
|
|
|
|
|
| 380 |
present_prediction = present_rows(prediction)
|
| 381 |
present_cells = len(present_prediction)
|
| 382 |
total_cells = len(prediction)
|
|
|
|
| 395 |
html.Div(
|
| 396 |
[
|
| 397 |
html.Div("Tang Lab", className="eyebrow"),
|
| 398 |
+
html.H1("Benchmark results"),
|
| 399 |
html.P(
|
| 400 |
+
"Compare neural-behavioral models across prediction, robustness, "
|
| 401 |
+
"cross-session latent geometry, attribution, and compute cost.",
|
| 402 |
className="lede",
|
| 403 |
),
|
| 404 |
],
|
|
|
|
| 407 |
html.Div(
|
| 408 |
[
|
| 409 |
stat_card("Models", str(len(MODELS)), "registered benchmark methods"),
|
| 410 |
+
stat_card("Datasets", str(len(DATASETS)), "neural-behavioral tasks"),
|
| 411 |
+
stat_card("Result Coverage", coverage_text, f"{coverage_pct:.1f}% complete"),
|
| 412 |
stat_card(
|
| 413 |
+
"Compute Mix",
|
| 414 |
f"{runtime_counts.get('cpu', 0)} CPU / {runtime_counts.get('gpu', 0)} GPU",
|
| 415 |
+
"registered model runtimes",
|
| 416 |
),
|
| 417 |
],
|
| 418 |
className="stat-grid",
|
|
|
|
| 459 |
className="tabs",
|
| 460 |
children=[
|
| 461 |
dcc.Tab(
|
| 462 |
+
label="Overview",
|
| 463 |
value="prediction",
|
| 464 |
children=[
|
| 465 |
panel(
|
| 466 |
+
"Clean Prediction Scores",
|
| 467 |
dcc.Graph(id="prediction-heatmap", config={"displayModeBar": False}),
|
| 468 |
dcc.Graph(id="prediction-ranking", config={"displayModeBar": False}),
|
| 469 |
dataframe_table("prediction-table"),
|
| 470 |
+
subtitle="Scores are shown within dataset. Regression tasks use R2; classification tasks use accuracy.",
|
| 471 |
)
|
| 472 |
],
|
| 473 |
),
|
|
|
|
| 488 |
value="consistency",
|
| 489 |
children=[
|
| 490 |
panel(
|
| 491 |
+
"Cross-Session Latent Consistency",
|
| 492 |
+
dcc.Graph(id="latent-space", config={"displayModeBar": False}),
|
| 493 |
dcc.Graph(id="consistency-bars", config={"displayModeBar": False}),
|
| 494 |
dcc.Graph(id="consistency-heatmap", config={"displayModeBar": False}),
|
| 495 |
dataframe_table("consistency-table"),
|
| 496 |
+
subtitle="Latent clouds show sampled 3D embeddings from real consistency artifacts. Scores summarize cross-session alignment.",
|
| 497 |
)
|
| 498 |
],
|
| 499 |
),
|
|
|
|
| 506 |
dcc.Graph(id="runtime-scatter", config={"displayModeBar": False}),
|
| 507 |
dcc.Graph(id="memory-bars", config={"displayModeBar": False}),
|
| 508 |
dataframe_table("runtime-table"),
|
| 509 |
+
subtitle="Training time and memory are summarized from benchmark run metadata.",
|
| 510 |
)
|
| 511 |
],
|
| 512 |
),
|
|
|
|
| 524 |
],
|
| 525 |
),
|
| 526 |
dcc.Tab(
|
| 527 |
+
label="Methods",
|
| 528 |
value="coverage",
|
| 529 |
children=[
|
| 530 |
panel(
|
| 531 |
+
"Model and Analysis Coverage",
|
| 532 |
dcc.Graph(id="coverage-bars", config={"displayModeBar": False}),
|
| 533 |
dataframe_table(
|
| 534 |
"coverage-table",
|
|
|
|
| 536 |
data=model_inventory.to_dict("records"),
|
| 537 |
page_size=25,
|
| 538 |
),
|
| 539 |
+
subtitle="Coverage reports which methods have exported benchmark summaries in this dashboard.",
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 540 |
)
|
| 541 |
],
|
| 542 |
),
|
|
|
|
| 566 |
heat_df["dataset_label"] = heat_df["dataset"].map(DATASET_LABELS).fillna(heat_df["dataset"])
|
| 567 |
pivot = heat_df.pivot_table(index="model", columns="dataset_label", values="score", aggfunc="first")
|
| 568 |
if not pivot.empty:
|
| 569 |
+
preferred = [m for m in selected_models(models) if m in pivot.index]
|
| 570 |
+
remaining = [m for m in sorted(pivot.index.astype(str)) if m not in preferred]
|
| 571 |
+
pivot = pivot.loc[preferred + remaining]
|
| 572 |
dataset_order = [DATASET_LABELS.get(ds, ds) for ds in DATASETS if DATASET_LABELS.get(ds, ds) in pivot.columns]
|
| 573 |
pivot = pivot.reindex(columns=dataset_order)
|
| 574 |
text = pivot.map(lambda x: "" if pd.isna(x) else f"{x:.3f}") if not pivot.empty else pivot
|
|
|
|
| 588 |
hovertemplate="model=%{y}<br>dataset=%{x}<br>score=%{z:.4f}<extra></extra>",
|
| 589 |
)
|
| 590 |
)
|
| 591 |
+
heatmap.update_layout(title="Clean-score matrix by dataset")
|
| 592 |
fig_layout(heatmap, height=max(430, 28 * len(pivot.index) + 170))
|
| 593 |
|
| 594 |
rank_df = present_rows(df_all)
|
|
|
|
| 624 |
"n_train_trials",
|
| 625 |
"n_test_trials",
|
| 626 |
"n_neurons",
|
|
|
|
| 627 |
]
|
| 628 |
table_df = df_all[df_all["dataset"] == dataset].copy()
|
| 629 |
for col in ["score", "latent_dim", "n_train_trials", "n_test_trials", "n_neurons"]:
|
|
|
|
| 671 |
fig.update_yaxes(title=ordered_unique(df["metric"])[0] if "metric" in df else "score")
|
| 672 |
fig_layout(fig, height=520)
|
| 673 |
|
| 674 |
+
table_cols = ["model", "metric", "score_at_noise0", "score_at_max_noise", "raw_auc", "mean_score"]
|
| 675 |
table_df = df[table_cols].copy()
|
| 676 |
for col in ["score_at_noise0", "score_at_max_noise", "raw_auc", "mean_score"]:
|
| 677 |
table_df[col] = table_df[col].map(lambda v: compact_number(v))
|
|
|
|
| 679 |
|
| 680 |
|
| 681 |
@app.callback(
|
| 682 |
+
Output("latent-space", "figure"),
|
| 683 |
Output("consistency-bars", "figure"),
|
| 684 |
Output("consistency-heatmap", "figure"),
|
| 685 |
Output("consistency-table", "columns"),
|
|
|
|
| 688 |
Input("model-filter", "value"),
|
| 689 |
)
|
| 690 |
def update_consistency(dataset: str, models: list[str] | None):
|
| 691 |
+
latent_fig = latent_space_figure(dataset, models)
|
| 692 |
df_all = filter_models(consistency, models)
|
| 693 |
if "is_active_model" in df_all.columns:
|
| 694 |
df_all = df_all[df_all["is_active_model"].astype(str).str.lower() == "true"]
|
| 695 |
df = df_all[df_all["dataset"] == dataset].copy() if not df_all.empty else df_all
|
| 696 |
if df.empty:
|
| 697 |
+
cols = [{"name": c, "id": c} for c in ["model", "dataset", "mean_r2"]]
|
| 698 |
+
return (
|
| 699 |
+
latent_fig,
|
| 700 |
+
empty_figure("Consistency analysis is not available for this dataset."),
|
| 701 |
+
empty_figure("Consistency analysis is not available for this dataset."),
|
| 702 |
+
cols,
|
| 703 |
+
[],
|
| 704 |
+
)
|
| 705 |
|
| 706 |
+
df["mean_r2"] = pd.to_numeric(df["mean_r2"], errors="coerce")
|
| 707 |
+
bar_df = df.sort_values("mean_r2", ascending=True)
|
|
|
|
| 708 |
bars = go.Figure(
|
| 709 |
go.Bar(
|
| 710 |
+
x=bar_df["mean_r2"],
|
| 711 |
y=bar_df["model"],
|
| 712 |
orientation="h",
|
| 713 |
+
marker=dict(color=bar_df["mean_r2"], colorscale="Bluyl"),
|
| 714 |
+
hovertemplate="model=%{y}<br>R2=%{x:.4f}<extra></extra>",
|
| 715 |
)
|
| 716 |
)
|
| 717 |
bars.update_layout(title=f"{DATASET_LABELS.get(dataset, dataset)} cross-session alignment")
|
| 718 |
+
bars.update_xaxes(title="mean R2")
|
| 719 |
fig_layout(bars, height=max(420, 27 * len(bar_df) + 150))
|
| 720 |
|
| 721 |
heat = df_all.copy()
|
| 722 |
+
heat["mean_r2"] = pd.to_numeric(heat["mean_r2"], errors="coerce")
|
| 723 |
heat["dataset_label"] = heat["dataset"].map(DATASET_LABELS).fillna(heat["dataset"])
|
| 724 |
+
pivot = heat.pivot_table(index="model", columns="dataset_label", values="mean_r2", aggfunc="first")
|
| 725 |
if not pivot.empty:
|
| 726 |
pivot = pivot.loc[pivot.mean(axis=1, skipna=True).sort_values(ascending=False).index]
|
| 727 |
text = pivot.map(lambda x: "" if pd.isna(x) else f"{x:.2f}") if not pivot.empty else pivot
|
|
|
|
| 746 |
"n_sessions",
|
| 747 |
"latent_dim",
|
| 748 |
"mean_r2",
|
|
|
|
| 749 |
"n_pairwise",
|
| 750 |
"scoring_modes",
|
|
|
|
| 751 |
]
|
| 752 |
table_df = df[[c for c in table_cols if c in df.columns]].copy()
|
| 753 |
+
for col in ["mean_r2", "latent_dim", "n_sessions", "n_pairwise"]:
|
| 754 |
if col in table_df:
|
| 755 |
table_df[col] = table_df[col].map(lambda v: compact_number(v))
|
| 756 |
+
return (
|
| 757 |
+
latent_fig,
|
| 758 |
+
bars,
|
| 759 |
+
heatmap,
|
| 760 |
+
[{"name": c, "id": c} for c in table_df.columns],
|
| 761 |
+
table_df.to_dict("records"),
|
| 762 |
+
)
|
| 763 |
|
| 764 |
|
| 765 |
@app.callback(
|
|
|
|
| 822 |
"inference_time_sec",
|
| 823 |
"peak_ram_gb",
|
| 824 |
"peak_vram_gb",
|
|
|
|
| 825 |
]
|
| 826 |
table_df = df[table_cols].copy()
|
| 827 |
for col in ["score", "training_time_sec", "inference_time_sec", "peak_ram_gb", "peak_vram_gb"]:
|
|
|
|
| 892 |
"spearman_corr",
|
| 893 |
"shap_mean_value",
|
| 894 |
"shap_fraction_positive",
|
|
|
|
| 895 |
]
|
| 896 |
table_df = nshap[[c for c in table_cols if c in nshap.columns]].copy()
|
| 897 |
for col in table_df.columns:
|
| 898 |
+
if col not in {"model", "dataset", "metric"}:
|
| 899 |
table_df[col] = table_df[col].map(lambda v: compact_number(v))
|
| 900 |
return nshap_fig, tshap_fig, [{"name": c, "id": c} for c in table_df.columns], table_df.to_dict("records")
|
| 901 |
|
assets/styles.css
CHANGED
|
@@ -4,46 +4,37 @@
|
|
| 4 |
|
| 5 |
body {
|
| 6 |
margin: 0;
|
| 7 |
-
background: #
|
| 8 |
-
color: #
|
| 9 |
font-family: Inter, Arial, sans-serif;
|
| 10 |
}
|
| 11 |
|
| 12 |
.app-shell {
|
| 13 |
min-height: 100vh;
|
| 14 |
-
padding:
|
| 15 |
}
|
| 16 |
|
| 17 |
.hero {
|
| 18 |
display: grid;
|
| 19 |
-
grid-template-columns: minmax(
|
| 20 |
-
gap:
|
| 21 |
-
align-items:
|
| 22 |
margin: 0 auto 18px;
|
| 23 |
-
max-width:
|
| 24 |
-
|
| 25 |
-
|
| 26 |
-
.hero-copy,
|
| 27 |
-
.stat-card,
|
| 28 |
-
.controls,
|
| 29 |
-
.panel,
|
| 30 |
-
.route-card {
|
| 31 |
-
background: #ffffff;
|
| 32 |
-
border: 1px solid #d8e2e8;
|
| 33 |
-
border-radius: 8px;
|
| 34 |
-
box-shadow: 0 1px 2px rgba(31, 41, 51, 0.04);
|
| 35 |
}
|
| 36 |
|
| 37 |
.hero-copy {
|
| 38 |
-
|
| 39 |
}
|
| 40 |
|
| 41 |
.eyebrow {
|
| 42 |
-
|
|
|
|
| 43 |
font-size: 12px;
|
| 44 |
font-weight: 800;
|
| 45 |
letter-spacing: 0;
|
| 46 |
-
margin-bottom: 8px;
|
| 47 |
text-transform: uppercase;
|
| 48 |
}
|
| 49 |
|
|
@@ -56,58 +47,72 @@ p {
|
|
| 56 |
|
| 57 |
h1 {
|
| 58 |
margin-bottom: 10px;
|
| 59 |
-
font-size:
|
| 60 |
-
line-height: 1.
|
| 61 |
letter-spacing: 0;
|
| 62 |
}
|
| 63 |
|
| 64 |
h2 {
|
| 65 |
margin-bottom: 4px;
|
| 66 |
font-size: 20px;
|
|
|
|
| 67 |
}
|
| 68 |
|
| 69 |
h3 {
|
| 70 |
margin-bottom: 8px;
|
| 71 |
-
font-size:
|
|
|
|
| 72 |
}
|
| 73 |
|
| 74 |
.lede {
|
| 75 |
max-width: 760px;
|
| 76 |
margin-bottom: 0;
|
| 77 |
-
color: #
|
| 78 |
-
font-size:
|
| 79 |
-
line-height: 1.
|
| 80 |
}
|
| 81 |
|
| 82 |
.stat-grid {
|
| 83 |
display: grid;
|
| 84 |
-
grid-template-columns: repeat(
|
| 85 |
-
gap:
|
|
|
|
|
|
|
|
|
|
|
|
|
| 86 |
}
|
| 87 |
|
| 88 |
.stat-card {
|
| 89 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 90 |
}
|
| 91 |
|
| 92 |
.stat-label {
|
| 93 |
-
color: #
|
| 94 |
-
font-size:
|
| 95 |
font-weight: 800;
|
|
|
|
| 96 |
text-transform: uppercase;
|
| 97 |
}
|
| 98 |
|
| 99 |
.stat-value {
|
| 100 |
-
margin-top:
|
| 101 |
color: #111827;
|
| 102 |
-
font-size:
|
| 103 |
font-weight: 800;
|
| 104 |
line-height: 1;
|
| 105 |
}
|
| 106 |
|
| 107 |
.stat-detail {
|
| 108 |
margin-top: 8px;
|
| 109 |
-
color: #
|
| 110 |
-
font-size:
|
|
|
|
| 111 |
}
|
| 112 |
|
| 113 |
.controls {
|
|
@@ -115,30 +120,34 @@ h3 {
|
|
| 115 |
grid-template-columns: minmax(240px, 320px) minmax(320px, 1fr);
|
| 116 |
gap: 18px;
|
| 117 |
margin: 0 auto 18px;
|
| 118 |
-
max-width:
|
| 119 |
-
padding:
|
|
|
|
|
|
|
|
|
|
| 120 |
}
|
| 121 |
|
| 122 |
.control label {
|
| 123 |
display: block;
|
| 124 |
margin-bottom: 7px;
|
| 125 |
-
color: #
|
| 126 |
-
font-size:
|
| 127 |
font-weight: 800;
|
|
|
|
|
|
|
| 128 |
}
|
| 129 |
|
| 130 |
.tabs {
|
| 131 |
margin: 0 auto;
|
| 132 |
-
max-width:
|
| 133 |
-
}
|
| 134 |
-
|
| 135 |
-
.tab {
|
| 136 |
-
border-radius: 8px 8px 0 0;
|
| 137 |
}
|
| 138 |
|
| 139 |
.panel {
|
| 140 |
-
margin-top:
|
| 141 |
padding: 18px;
|
|
|
|
|
|
|
|
|
|
| 142 |
}
|
| 143 |
|
| 144 |
.panel-heading {
|
|
@@ -147,52 +156,50 @@ h3 {
|
|
| 147 |
|
| 148 |
.panel-subtitle {
|
| 149 |
margin-bottom: 0;
|
| 150 |
-
color: #
|
| 151 |
-
font-size:
|
| 152 |
line-height: 1.45;
|
| 153 |
}
|
| 154 |
|
| 155 |
-
|
| 156 |
-
|
| 157 |
-
|
| 158 |
-
|
| 159 |
-
|
| 160 |
-
}
|
| 161 |
|
| 162 |
-
.
|
| 163 |
-
|
| 164 |
-
|
| 165 |
-
}
|
| 166 |
|
| 167 |
-
.
|
| 168 |
-
|
| 169 |
-
|
| 170 |
-
line-height: 1.5;
|
| 171 |
-
}
|
| 172 |
|
| 173 |
-
.
|
| 174 |
-
|
| 175 |
-
|
| 176 |
-
padding: 14px 16px;
|
| 177 |
-
background: #18202a;
|
| 178 |
-
border-radius: 8px;
|
| 179 |
-
color: #e6edf2;
|
| 180 |
-
font-size: 13px;
|
| 181 |
-
line-height: 1.5;
|
| 182 |
}
|
| 183 |
|
| 184 |
-
@media (max-width:
|
| 185 |
.app-shell {
|
| 186 |
padding: 12px;
|
| 187 |
}
|
| 188 |
|
| 189 |
-
|
| 190 |
-
|
| 191 |
-
|
|
|
|
|
|
|
| 192 |
grid-template-columns: 1fr;
|
| 193 |
}
|
| 194 |
|
| 195 |
-
|
| 196 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 197 |
}
|
| 198 |
}
|
|
|
|
| 4 |
|
| 5 |
body {
|
| 6 |
margin: 0;
|
| 7 |
+
background: #f7f8fa;
|
| 8 |
+
color: #18212b;
|
| 9 |
font-family: Inter, Arial, sans-serif;
|
| 10 |
}
|
| 11 |
|
| 12 |
.app-shell {
|
| 13 |
min-height: 100vh;
|
| 14 |
+
padding: 22px;
|
| 15 |
}
|
| 16 |
|
| 17 |
.hero {
|
| 18 |
display: grid;
|
| 19 |
+
grid-template-columns: minmax(340px, 1fr) minmax(420px, 0.9fr);
|
| 20 |
+
gap: 28px;
|
| 21 |
+
align-items: end;
|
| 22 |
margin: 0 auto 18px;
|
| 23 |
+
max-width: 1500px;
|
| 24 |
+
padding: 14px 4px 18px;
|
| 25 |
+
border-bottom: 1px solid #dfe6eb;
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 26 |
}
|
| 27 |
|
| 28 |
.hero-copy {
|
| 29 |
+
min-width: 0;
|
| 30 |
}
|
| 31 |
|
| 32 |
.eyebrow {
|
| 33 |
+
margin-bottom: 8px;
|
| 34 |
+
color: #536271;
|
| 35 |
font-size: 12px;
|
| 36 |
font-weight: 800;
|
| 37 |
letter-spacing: 0;
|
|
|
|
| 38 |
text-transform: uppercase;
|
| 39 |
}
|
| 40 |
|
|
|
|
| 47 |
|
| 48 |
h1 {
|
| 49 |
margin-bottom: 10px;
|
| 50 |
+
font-size: 44px;
|
| 51 |
+
line-height: 1.05;
|
| 52 |
letter-spacing: 0;
|
| 53 |
}
|
| 54 |
|
| 55 |
h2 {
|
| 56 |
margin-bottom: 4px;
|
| 57 |
font-size: 20px;
|
| 58 |
+
letter-spacing: 0;
|
| 59 |
}
|
| 60 |
|
| 61 |
h3 {
|
| 62 |
margin-bottom: 8px;
|
| 63 |
+
font-size: 15px;
|
| 64 |
+
letter-spacing: 0;
|
| 65 |
}
|
| 66 |
|
| 67 |
.lede {
|
| 68 |
max-width: 760px;
|
| 69 |
margin-bottom: 0;
|
| 70 |
+
color: #536271;
|
| 71 |
+
font-size: 16px;
|
| 72 |
+
line-height: 1.5;
|
| 73 |
}
|
| 74 |
|
| 75 |
.stat-grid {
|
| 76 |
display: grid;
|
| 77 |
+
grid-template-columns: repeat(4, minmax(110px, 1fr));
|
| 78 |
+
gap: 0;
|
| 79 |
+
align-items: end;
|
| 80 |
+
border: 1px solid #dfe6eb;
|
| 81 |
+
border-radius: 8px;
|
| 82 |
+
background: #ffffff;
|
| 83 |
}
|
| 84 |
|
| 85 |
.stat-card {
|
| 86 |
+
min-height: 108px;
|
| 87 |
+
padding: 18px;
|
| 88 |
+
border-right: 1px solid #e6ecef;
|
| 89 |
+
}
|
| 90 |
+
|
| 91 |
+
.stat-card:last-child {
|
| 92 |
+
border-right: 0;
|
| 93 |
}
|
| 94 |
|
| 95 |
.stat-label {
|
| 96 |
+
color: #617282;
|
| 97 |
+
font-size: 11px;
|
| 98 |
font-weight: 800;
|
| 99 |
+
letter-spacing: 0;
|
| 100 |
text-transform: uppercase;
|
| 101 |
}
|
| 102 |
|
| 103 |
.stat-value {
|
| 104 |
+
margin-top: 9px;
|
| 105 |
color: #111827;
|
| 106 |
+
font-size: 28px;
|
| 107 |
font-weight: 800;
|
| 108 |
line-height: 1;
|
| 109 |
}
|
| 110 |
|
| 111 |
.stat-detail {
|
| 112 |
margin-top: 8px;
|
| 113 |
+
color: #657483;
|
| 114 |
+
font-size: 12px;
|
| 115 |
+
line-height: 1.35;
|
| 116 |
}
|
| 117 |
|
| 118 |
.controls {
|
|
|
|
| 120 |
grid-template-columns: minmax(240px, 320px) minmax(320px, 1fr);
|
| 121 |
gap: 18px;
|
| 122 |
margin: 0 auto 18px;
|
| 123 |
+
max-width: 1500px;
|
| 124 |
+
padding: 14px;
|
| 125 |
+
border: 1px solid #dfe6eb;
|
| 126 |
+
border-radius: 8px;
|
| 127 |
+
background: #ffffff;
|
| 128 |
}
|
| 129 |
|
| 130 |
.control label {
|
| 131 |
display: block;
|
| 132 |
margin-bottom: 7px;
|
| 133 |
+
color: #394756;
|
| 134 |
+
font-size: 12px;
|
| 135 |
font-weight: 800;
|
| 136 |
+
letter-spacing: 0;
|
| 137 |
+
text-transform: uppercase;
|
| 138 |
}
|
| 139 |
|
| 140 |
.tabs {
|
| 141 |
margin: 0 auto;
|
| 142 |
+
max-width: 1500px;
|
|
|
|
|
|
|
|
|
|
|
|
|
| 143 |
}
|
| 144 |
|
| 145 |
.panel {
|
| 146 |
+
margin-top: 14px;
|
| 147 |
padding: 18px;
|
| 148 |
+
border: 1px solid #dfe6eb;
|
| 149 |
+
border-radius: 8px;
|
| 150 |
+
background: #ffffff;
|
| 151 |
}
|
| 152 |
|
| 153 |
.panel-heading {
|
|
|
|
| 156 |
|
| 157 |
.panel-subtitle {
|
| 158 |
margin-bottom: 0;
|
| 159 |
+
color: #5b6b7b;
|
| 160 |
+
font-size: 13px;
|
| 161 |
line-height: 1.45;
|
| 162 |
}
|
| 163 |
|
| 164 |
+
@media (max-width: 1050px) {
|
| 165 |
+
.hero,
|
| 166 |
+
.controls {
|
| 167 |
+
grid-template-columns: 1fr;
|
| 168 |
+
}
|
|
|
|
| 169 |
|
| 170 |
+
.stat-grid {
|
| 171 |
+
grid-template-columns: repeat(2, minmax(120px, 1fr));
|
| 172 |
+
}
|
|
|
|
| 173 |
|
| 174 |
+
.stat-card:nth-child(2) {
|
| 175 |
+
border-right: 0;
|
| 176 |
+
}
|
|
|
|
|
|
|
| 177 |
|
| 178 |
+
.stat-card:nth-child(-n + 2) {
|
| 179 |
+
border-bottom: 1px solid #e6ecef;
|
| 180 |
+
}
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 181 |
}
|
| 182 |
|
| 183 |
+
@media (max-width: 680px) {
|
| 184 |
.app-shell {
|
| 185 |
padding: 12px;
|
| 186 |
}
|
| 187 |
|
| 188 |
+
h1 {
|
| 189 |
+
font-size: 34px;
|
| 190 |
+
}
|
| 191 |
+
|
| 192 |
+
.stat-grid {
|
| 193 |
grid-template-columns: 1fr;
|
| 194 |
}
|
| 195 |
|
| 196 |
+
.stat-card,
|
| 197 |
+
.stat-card:nth-child(2) {
|
| 198 |
+
border-right: 0;
|
| 199 |
+
border-bottom: 1px solid #e6ecef;
|
| 200 |
+
}
|
| 201 |
+
|
| 202 |
+
.stat-card:last-child {
|
| 203 |
+
border-bottom: 0;
|
| 204 |
}
|
| 205 |
}
|
data/latent_samples.csv
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
requirements.txt
CHANGED
|
@@ -1,5 +1,5 @@
|
|
| 1 |
-
dash
|
| 2 |
-
gunicorn
|
| 3 |
-
numpy
|
| 4 |
-
pandas
|
| 5 |
-
plotly
|
|
|
|
| 1 |
+
dash>=2.17,<5
|
| 2 |
+
gunicorn>=22,<24
|
| 3 |
+
numpy>=1.26,<3
|
| 4 |
+
pandas>=2.1,<3
|
| 5 |
+
plotly>=5.22,<7
|