Spaces:
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Update search_utils.py
Browse files- search_utils.py +9 -81
search_utils.py
CHANGED
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@@ -145,7 +145,7 @@ class MetadataManager:
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shard_path = self.shard_dir / shard
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if not shard_path.exists():
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logger.error(f"Shard file not found: {shard_path}")
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return pd.DataFrame(columns=["title", "summary", "similarity"])
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file_size_mb = os.path.getsize(shard_path) / (1024 * 1024)
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logger.info(f"Loading shard file: {shard} (size: {file_size_mb:.2f} MB)")
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try:
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@@ -158,7 +158,7 @@ class MetadataManager:
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logger.info(f"Parquet schema: {schema}")
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except Exception:
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pass
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return pd.DataFrame(columns=["title", "summary", "similarity"])
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df = self.loaded_shards[shard]
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df_len = len(df)
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valid_local_indices = [idx for idx in local_indices if 0 <= idx < df_len]
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@@ -170,13 +170,13 @@ class MetadataManager:
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return chunk
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except Exception as e:
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logger.error(f"Error processing shard {shard}: {str(e)}", exc_info=True)
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return pd.DataFrame(columns=["title", "summary", "similarity"])
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def get_metadata(self, global_indices):
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"""Retrieve metadata for a batch of global indices using parallel shard processing."""
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if isinstance(global_indices, np.ndarray) and global_indices.size == 0:
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logger.warning("Empty indices array passed to get_metadata")
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return pd.DataFrame(columns=["title", "summary", "similarity"])
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indices_list = global_indices.tolist() if isinstance(global_indices, np.ndarray) else global_indices
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logger.info(f"Retrieving metadata for {len(indices_list)} indices")
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@@ -186,7 +186,7 @@ class MetadataManager:
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logger.warning(f"Filtered out {invalid_count} invalid indices")
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if not valid_indices:
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logger.warning("No valid indices remain after filtering")
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return pd.DataFrame(columns=["title", "summary", "similarity"])
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# Group indices by shard
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shard_groups = {}
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@@ -216,69 +216,9 @@ class MetadataManager:
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return combined
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else:
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logger.warning("No metadata records retrieved")
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return pd.DataFrame(columns=["title", "summary", "similarity"])
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def _init_url_resolver(self):
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"""Initialize API session and cache."""
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self.session = requests.Session()
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adapter = requests.adapters.HTTPAdapter(
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pool_connections=10,
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pool_maxsize=10,
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max_retries=3
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)
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self.session.mount("https://", adapter)
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def resolve_url(self, title: str) -> str:
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"""Optimized URL resolution with fail-fast."""
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if title in self.api_cache:
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return self.api_cache[title]
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links = {}
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arxiv_url = self._get_arxiv_url(title)
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if arxiv_url:
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links["arxiv"] = arxiv_url
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semantic_url = self._get_semantic_url(title)
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if semantic_url:
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links["semantic"] = semantic_url
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scholar_url = f"https://scholar.google.com/scholar?q={quote(title)}"
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links["google"] = scholar_url
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self.api_cache[title] = links
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return links
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def _get_arxiv_url(self, title: str) -> str:
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"""Fast arXiv lookup with timeout."""
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with self.session.get(
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"http://export.arxiv.org/api/query",
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params={"search_query": f'ti:"{title}"', "max_results": 1, "sortBy": "relevance"},
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timeout=2
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) as response:
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if response.ok:
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return self._parse_arxiv_response(response.text)
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return ""
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def _parse_arxiv_response(self, xml: str) -> str:
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"""Fast XML parsing using string operations."""
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if "<entry>" not in xml:
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return ""
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start = xml.find("<id>") + 4
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end = xml.find("</id>", start)
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return xml[start:end].replace("http:", "https:") if start > 3 else ""
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def _get_semantic_url(self, title: str) -> str:
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"""Batch-friendly Semantic Scholar lookup."""
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with self.session.get(
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"https://api.semanticscholar.org/graph/v1/paper/search",
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params={"query": title[:200], "limit": 1},
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timeout=2
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) as response:
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if response.ok:
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data = response.json()
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if data.get("data"):
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return data["data"][0].get("url", "")
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return ""
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class SemanticSearch:
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def __init__(self):
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self.shard_dir = Path("compressed_shards")
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@@ -429,9 +369,8 @@ class SemanticSearch:
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self.logger.debug(f"Similarity stats: min={results['similarity'].min():.3f}, " +
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f"max={results['similarity'].max():.3f}, " +
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f"mean={results['similarity'].mean():.3f}")
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results['source'] = results[
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)
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pre_dedup = len(results)
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results = results.drop_duplicates(subset=["title", "source"]).sort_values("similarity", ascending=False).head(top_k)
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post_dedup = len(results)
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@@ -441,15 +380,4 @@ class SemanticSearch:
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return results.reset_index(drop=True)
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except Exception as e:
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self.logger.error(f"Result processing failed: {str(e)}", exc_info=True)
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return pd.DataFrame(columns=["title", "summary", "source", "similarity"])
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def _format_source_links(self, links):
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"""Generate an HTML snippet for the available source links."""
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html_parts = []
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if "arxiv" in links:
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html_parts.append(f"<a class='source-link' href='{links['arxiv']}' target='_blank' rel='noopener noreferrer'> π arXiv</a>")
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if "semantic" in links:
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html_parts.append(f"<a class='source-link' href='{links['semantic']}' target='_blank' rel='noopener noreferrer'> π Semantic Scholar</a>")
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if "google" in links:
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html_parts.append(f"<a class='source-link' href='{links['google']}' target='_blank' rel='noopener noreferrer'> π Google Scholar</a>")
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return " | ".join(html_parts)
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shard_path = self.shard_dir / shard
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if not shard_path.exists():
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logger.error(f"Shard file not found: {shard_path}")
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return pd.DataFrame(columns=["title", "summary", "similarity", "source"])
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file_size_mb = os.path.getsize(shard_path) / (1024 * 1024)
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logger.info(f"Loading shard file: {shard} (size: {file_size_mb:.2f} MB)")
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try:
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logger.info(f"Parquet schema: {schema}")
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except Exception:
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pass
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return pd.DataFrame(columns=["title", "summary", "similarity", "source"])
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df = self.loaded_shards[shard]
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df_len = len(df)
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valid_local_indices = [idx for idx in local_indices if 0 <= idx < df_len]
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return chunk
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except Exception as e:
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logger.error(f"Error processing shard {shard}: {str(e)}", exc_info=True)
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return pd.DataFrame(columns=["title", "summary", "similarity", "source"])
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def get_metadata(self, global_indices):
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"""Retrieve metadata for a batch of global indices using parallel shard processing."""
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if isinstance(global_indices, np.ndarray) and global_indices.size == 0:
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logger.warning("Empty indices array passed to get_metadata")
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return pd.DataFrame(columns=["title", "summary", "similarity", "source"])
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indices_list = global_indices.tolist() if isinstance(global_indices, np.ndarray) else global_indices
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logger.info(f"Retrieving metadata for {len(indices_list)} indices")
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logger.warning(f"Filtered out {invalid_count} invalid indices")
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if not valid_indices:
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logger.warning("No valid indices remain after filtering")
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return pd.DataFrame(columns=["title", "summary", "similarity", "source"])
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# Group indices by shard
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shard_groups = {}
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return combined
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else:
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logger.warning("No metadata records retrieved")
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return pd.DataFrame(columns=["title", "summary", "similarity", "source"])
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class SemanticSearch:
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def __init__(self):
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self.shard_dir = Path("compressed_shards")
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self.logger.debug(f"Similarity stats: min={results['similarity'].min():.3f}, " +
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f"max={results['similarity'].max():.3f}, " +
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f"mean={results['similarity'].mean():.3f}")
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results['source'] = results["source"]
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pre_dedup = len(results)
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results = results.drop_duplicates(subset=["title", "source"]).sort_values("similarity", ascending=False).head(top_k)
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post_dedup = len(results)
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return results.reset_index(drop=True)
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except Exception as e:
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self.logger.error(f"Result processing failed: {str(e)}", exc_info=True)
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return pd.DataFrame(columns=["title", "summary", "source", "similarity"])
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