Spaces:
Sleeping
Sleeping
minor update
Browse files
app.py
CHANGED
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@@ -432,7 +432,8 @@ def plot_probabilities(probabilities):
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if len(probabilities) < 1:
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return None
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prob_df = pd.DataFrame({"labels": cell_types, "values": probabilities})
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return prob_df
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def run_mapping():
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@@ -456,7 +457,7 @@ def run_registration(data_type, selected_idx):
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return "Registration complete!"
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def download_csv():
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return '
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def handle_data_type_change(dt):
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@@ -498,7 +499,7 @@ with gr.Blocks() as demo:
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gr.Markdown("### Step 5: Quantitative results of the mapping model.")
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prob_plot = gr.BarPlot(prob_df, x="labels", y="values", title="Cell Type Probabilities", scroll_to_output=True, x_label_angle=-90, height=400)
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gr.Markdown("### Step 6: Download Results.")
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download_button = gr.DownloadButton(label="Download Results", value='
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nifti_file.change(
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load_nifti_or_png,
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if len(probabilities) < 1:
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return None
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prob_df = pd.DataFrame({"labels": cell_types, "values": probabilities})
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os.makedirs("outputs", exist_ok=True)
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prob_df.to_csv('outputs/Cell_types_predictions.csv', index=False)
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return prob_df
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def run_mapping():
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return "Registration complete!"
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def download_csv():
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return 'outputs/Cell_types_predictions.csv'
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def handle_data_type_change(dt):
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gr.Markdown("### Step 5: Quantitative results of the mapping model.")
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prob_plot = gr.BarPlot(prob_df, x="labels", y="values", title="Cell Type Probabilities", scroll_to_output=True, x_label_angle=-90, height=400)
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gr.Markdown("### Step 6: Download Results.")
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download_button = gr.DownloadButton(label="Download Results", value='outputs/Cell_types_predictions.csv')
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nifti_file.change(
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load_nifti_or_png,
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