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Upload app.py
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app.py
CHANGED
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@@ -103,19 +103,19 @@ with gr.Blocks() as demo:
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)
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with gr.Row(visible=False) as slice_row:
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with gr.Column(scale=
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gr.Markdown("### Step 2: Visualizing your uploaded sample")
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image_display = gr.Image()
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slice_slider = gr.Slider(minimum=0, maximum=0, value=0, step=1, label="Browse Slices", visible=False)
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with gr.Column(scale=1):
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gr.Markdown("### Step 3: Visualizing Allen Brain Cell Types Atlas")
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gallery = gr.Gallery(label="ABC Atlas")
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gr.Markdown("**Step 4: Run cell type mapping**")
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run_button = gr.Button("Run Mapping")
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with gr.Column(visible=False) as plot_row:
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gr.Markdown("### Step 5: Quantitative results of the mapping model.")
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prob_plot = gr.BarPlot(prob_df, x="labels", y="values", title="Cell Type Probabilities", scroll_to_output=True, x_label_angle=-90)
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gr.Markdown("### Step 6: Download Results.")
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download_button = gr.DownloadButton(label="Download Results", value='./Cell_types_predictions.csv')
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)
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with gr.Row(visible=False) as slice_row:
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with gr.Column(scale=1):
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gr.Markdown("### Step 2: Visualizing your uploaded sample")
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image_display = gr.Image(height = 400)
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slice_slider = gr.Slider(minimum=0, maximum=0, value=0, step=1, label="Browse Slices", visible=False)
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with gr.Column(scale=1):
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gr.Markdown("### Step 3: Visualizing Allen Brain Cell Types Atlas")
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gallery = gr.Gallery(label="ABC Atlas", height = 400)
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gr.Markdown("**Step 4: Run cell type mapping**")
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run_button = gr.Button("Run Mapping")
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with gr.Column(visible=False) as plot_row:
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gr.Markdown("### Step 5: Quantitative results of the mapping model.")
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prob_plot = gr.BarPlot(prob_df, x="labels", y="values", title="Cell Type Probabilities", scroll_to_output=True, x_label_angle=-90, height = 600)
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gr.Markdown("### Step 6: Download Results.")
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download_button = gr.DownloadButton(label="Download Results", value='./Cell_types_predictions.csv')
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