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Update PFCdevApp.qmd
Browse files- PFCdevApp.qmd +5 -15
PFCdevApp.qmd
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@@ -59,6 +59,10 @@ We collected the whole brain stereo-seq datasets of P1 and Adult mice from [(Han
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, extracted and analyzed the PFC brain region. Users can browse the following content through the spatial page:
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</p>
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@@ -228,21 +232,7 @@ output$gene_plot <- renderPlot({
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output$vln_plot <- renderPlot({
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seu(),
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features = input$gene,
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reduction = 'umap',
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split.by = "orig.ident",
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ncol=4,
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order = T,
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pt.size = 0.5
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) &
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theme_bw(base_size = 15) &
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theme(panel.grid = element_blank(), plot.title = element_text(hjust = 0.5),
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strip.text = element_text(size = 20, face = "bold"),
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legend.position = c(0.1,0.25)) &
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coord_fixed() &
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scale_color_gradientn(colours = c("lightblue3", "lightblue", "white", "red", "red4"), limits=c(0,2), breaks=c(0,2), na.value = "red4")
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})
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```
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, extracted and analyzed the PFC brain region. Users can browse the following content through the spatial page:
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</p>
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output$vln_plot <- renderPlot({
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head(seu()@meta.data[,1:5])
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})
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```
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