TigerZheng commited on
Commit
e695671
·
verified ·
1 Parent(s): 4c65101

Update PFCdevApp.qmd

Browse files
Files changed (1) hide show
  1. PFCdevApp.qmd +2 -4
PFCdevApp.qmd CHANGED
@@ -65,6 +65,8 @@ We collected the whole brain stereo-seq datasets of P1 and Adult mice from [(Han
65
 
66
 
67
 
 
 
68
  , extracted and analyzed the PFC brain region. Users can browse the following content through the spatial page:
69
  </p>
70
 
@@ -348,10 +350,6 @@ output$p77_geneplot <- renderPlot({
348
  x = sp_p77$x_rotated, y = sp_p77$y_rotated,
349
  gene = scale(gene_i_exp)
350
  )
351
- data <- data.frame(
352
- x = sp_p77$x_rotated, y = sp_p77$y_rotated,
353
- gene = scale(sp_p77@assays$RNA$counts[gene_i,])
354
- )
355
  data$gene[data$gene<0] <- 0
356
  data$gene[data$gene>3] <- 3
357
  color <- col_cluster[["gene"]]
 
65
 
66
 
67
 
68
+
69
+
70
  , extracted and analyzed the PFC brain region. Users can browse the following content through the spatial page:
71
  </p>
72
 
 
350
  x = sp_p77$x_rotated, y = sp_p77$y_rotated,
351
  gene = scale(gene_i_exp)
352
  )
 
 
 
 
353
  data$gene[data$gene<0] <- 0
354
  data$gene[data$gene>3] <- 3
355
  color <- col_cluster[["gene"]]