Update R/Palettes.R

R/Palettes.R

@@ -14,6 +14,7 @@ col_cluster[["SubType"]] <- c(
   "L5_NP"='#8976ff',
   "L6_CT_1"='#f05a9e', "L6_CT_2"="#d75ff6")
 
+
 col_sample <- c('Adult1' = "#1e76b2", 'Adult2' = "#fd7e0c", 'Adult3' = "#2a9c67")
 
 col_Glu_GABA <- c('Excitatory' = "#7570B3FF", 'Inhibitory' = "#E7298AFF",
@@ -28,7 +29,7 @@ col_MainType <- c('Excitatory' = "#7570B3FF", 'Inhibitory' = "#E7298AFF",
 col_BC_label <- c(Barcoded = '#f8cb7f', Unbarcoded = '#90a5e1')
 
 col_Barcode <- c(
-  'ITi_D'='#1f77b4', 'ITi_V'='#ff7f0e','ITc'='#2ca02c','PTi'='#d62728',
+  'ITi-M1'='#1f77b4', 'ITi-M2'='#ff7f0e','ITc-M3'='#2ca02c','PTi'='#d62728',
   'VIS-I'="#536dfe",'CP-I'="#448aff",'SSp-I'="#40c4ff",'AUD-I'="#18ffff",'RSP-I'="#84ffff",
   'ACB-I'="#ff6e40",'BLA-I'="#ffab40",'ENTl-I'="#ffd740",'AId-I'="#ffff00",'ECT-I'="#ffff8d",
   'CP-C'="#00bfa5",'PL-C'="#00c853",'RSP-C'="#64dd17",
@@ -39,7 +40,7 @@ col_Barcode <- c(
 col_BC_num <- c('#5e4fa2','#3288bd','#66c2a5','#abdda4','#e6f598','#fee08b','#fdae61',
                 '#f46d43','#d53e4f','#9e0142')
 
-col_Proj_module <- c('ITi-D'='#1f77b4', 'ITi-V'='#ff7f0e','ITc'='#2ca02c','PTi'='#d62728')
+col_Proj_module <- c('ITi-M1'='#1f77b4', 'ITi-M2'='#ff7f0e','ITc-M3'='#2ca02c','PTi'='#d62728')
 col_Proj_subtype <- c(
   "1"="#304ffe","14"="#3d5afe","17"="#536dfe","22"="#8c9eff","23"="#2962ff","25"="#2979ff",
   "26"="#448aff","27"="#82b1ff","28"="#80d8ff","29"="#0091ea","31"="#00b0ff",
@@ -52,6 +53,8 @@ col_Proj_subtype <- c(
 col_Proj_ITPT <- c('IT'='#1f77b4', 'PT'='#d62728')
 col_D_V <- c('Dorsal'='#1f77b4', 'Ventral'='#ff7f0e')
 
+
+
 col_subtype_target <- c("L2/3_IT_1"='#ffd600', "L2/3_IT_2"='#ffff8d',
                         "L4/5_IT_1"='#ff6d00',  "L4/5_IT_2"='#ffd180',
                         "L5_IT_1"='#0091ea', "L5_IT_2"='#80d8ff',
@@ -59,7 +62,7 @@ col_subtype_target <- c("L2/3_IT_1"='#ffd600', "L2/3_IT_2"='#ffff8d',
                         "L5_PT_1"='#304ffe', "L5_PT_2"='#8c9eff',
                         "L5_NP"='#8976ff',
                         "L6_CT_1"='#f05a9e', "L6_CT_2"="#d75ff6",
-                        'ITi-D'='#1f77b4', 'ITi-V'='#ff7f0e','ITc'='#2ca02c','PTi'='#d62728',
+                        'ITi-M1'='#1f77b4', 'ITi-M2'='#ff7f0e','ITc-M3'='#2ca02c','PTi'='#d62728',
                         'VIS-I'="#536dfe",'CP-I'="#448aff",'SSp-I'="#40c4ff",'AUD-I'="#18ffff",'RSP-I'="#84ffff",
                         'ACB-I'="#ff6e40",'BLA-I'="#ffab40",'ENTl-I'="#ffd740",'AId-I'="#ffff00",'ECT-I'="#ffff8d",
                         'CP-C'="#00bfa5",'PL-C'="#00c853",'RSP-C'="#64dd17",