lynn-twinkl
commited on
Commit
·
b86fc29
1
Parent(s):
e080251
Moved file
Browse files
notebooks/debug-labeled-data.py
DELETED
|
@@ -1,89 +0,0 @@
|
|
| 1 |
-
import sys
|
| 2 |
-
import json
|
| 3 |
-
import re
|
| 4 |
-
|
| 5 |
-
|
| 6 |
-
json_file_path = sys.argv[1]
|
| 7 |
-
text_key = sys.argv[2]
|
| 8 |
-
out_path = sys.argv[3]
|
| 9 |
-
|
| 10 |
-
# ------------ FUNCTION ------------
|
| 11 |
-
|
| 12 |
-
def trim_and_fix_offsets(raw_data, context_key=text_key):
|
| 13 |
-
"""
|
| 14 |
-
Attempt to fix leading/trailing whitespace in spans and recalc offsets.
|
| 15 |
-
Then do a local substring search to fix minor misalignments.
|
| 16 |
-
"""
|
| 17 |
-
fixed_data = []
|
| 18 |
-
for i, record in enumerate(raw_data):
|
| 19 |
-
text = record[context_key]
|
| 20 |
-
new_labels = []
|
| 21 |
-
for ann in record["label"]:
|
| 22 |
-
label = ann["labels"][0]
|
| 23 |
-
old_start, old_end = ann["start"], ann["end"]
|
| 24 |
-
original_substring = text[old_start:old_end]
|
| 25 |
-
trimmed_substring = original_substring.strip()
|
| 26 |
-
|
| 27 |
-
# 1) Trim leading/trailing whitespace offsets
|
| 28 |
-
# Move start forward while it points to space
|
| 29 |
-
start = old_start
|
| 30 |
-
while start < old_end and text[start].isspace():
|
| 31 |
-
start += 1
|
| 32 |
-
# Move end backward while it points to space
|
| 33 |
-
end = old_end
|
| 34 |
-
while end > start and text[end - 1].isspace():
|
| 35 |
-
end -= 1
|
| 36 |
-
|
| 37 |
-
# After naive trimming, see if the substring still matches
|
| 38 |
-
new_substring = text[start:end]
|
| 39 |
-
if new_substring == trimmed_substring:
|
| 40 |
-
# Great, we can trust these offsets directly
|
| 41 |
-
pass
|
| 42 |
-
else:
|
| 43 |
-
# Possibly there's hidden Unicode or the original offset was off.
|
| 44 |
-
# We'll do a local substring search around `old_start`.
|
| 45 |
-
# We'll search for `trimmed_substring` in a window of +/- 30 chars.
|
| 46 |
-
window_size = 30
|
| 47 |
-
|
| 48 |
-
# Define a safe search window in the text
|
| 49 |
-
search_start = max(0, old_start - window_size)
|
| 50 |
-
search_end = min(len(text), old_end + window_size)
|
| 51 |
-
window_text = text[search_start:search_end]
|
| 52 |
-
|
| 53 |
-
# Try to find the first occurrence of trimmed_substring in that window
|
| 54 |
-
local_pos = window_text.find(trimmed_substring)
|
| 55 |
-
if local_pos != -1:
|
| 56 |
-
# Recalc absolute offset
|
| 57 |
-
start = search_start + local_pos
|
| 58 |
-
end = start + len(trimmed_substring)
|
| 59 |
-
new_substring = text[start:end]
|
| 60 |
-
else:
|
| 61 |
-
# We failed to find it in the local region
|
| 62 |
-
print(f"[Record {i}] Can't find '{trimmed_substring}' near offset {old_start}-{old_end}")
|
| 63 |
-
# We'll leave this annotation as-is or skip it
|
| 64 |
-
start, end = old_start, old_end
|
| 65 |
-
new_substring = original_substring
|
| 66 |
-
|
| 67 |
-
new_labels.append({
|
| 68 |
-
"start": start,
|
| 69 |
-
"end": end,
|
| 70 |
-
"text": new_substring,
|
| 71 |
-
"labels": [label]
|
| 72 |
-
})
|
| 73 |
-
|
| 74 |
-
# Update the record with the new label data
|
| 75 |
-
new_record = dict(record)
|
| 76 |
-
new_record["label"] = new_labels
|
| 77 |
-
fixed_data.append(new_record)
|
| 78 |
-
|
| 79 |
-
return fixed_data
|
| 80 |
-
|
| 81 |
-
|
| 82 |
-
# ----------------- USAGE ----------------
|
| 83 |
-
with open(json_file_path, "r", encoding="utf-8") as f:
|
| 84 |
-
raw_data = json.load(f)
|
| 85 |
-
|
| 86 |
-
fixed_data = trim_and_fix_offsets(raw_data, context_key=text_key)
|
| 87 |
-
|
| 88 |
-
with open(out_path, "w", encoding="utf-8") as out:
|
| 89 |
-
json.dump(fixed_data, out, indent=2, ensure_ascii=False)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|