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import pickle
import pandas as pd
import shap
from shap.plots._force_matplotlib import draw_additive_plot
import gradio as gr
import numpy as np
import matplotlib.pyplot as plt
# load the model from disk
loaded_model = pickle.load(open("heart_xgb.pkl", 'rb'))
# Setup SHAP
explainer = shap.Explainer(loaded_model) # PLEASE DO NOT CHANGE THIS.
# Create the main function for server
def main_func(age, sex, cp, trtbps, chol, fbs, restecg, thalachh,exng,oldpeak,slp,caa,thall):
new_row = pd.DataFrame.from_dict({'age':age,'sex':sex,
'cp':cp,'trtbps':trtbps,'chol':chol,
'fbs':fbs, 'restecg':restecg,'thalachh':thalachh,'exng':exng,
'oldpeak':oldpeak,'slp':slp,'caa':caa,'thall':thall},
orient = 'index').transpose()
prob = loaded_model.predict_proba(new_row)
shap_values = explainer(new_row)
# plot = shap.force_plot(shap_values[0], matplotlib=True, figsize=(30,30), show=False)
# plot = shap.plots.waterfall(shap_values[0], max_display=6, show=False)
plot = shap.plots.bar(shap_values[0], max_display=6, order=shap.Explanation.abs, show_data='auto', show=False)
plt.tight_layout()
local_plot = plt.gcf()
plt.close()
return {"Low Chance": float(prob[0][0]), "High Chance": 1-float(prob[0][0])}, local_plot
# Create the UI
title = "**Heart Attack Predictor & Interpreter** 🪐 TEAM 7"
description1 = """This app takes info from subjects and predicts their heart attack likelihood. Do not use for medical diagnosis."""
description2 = """
To use the app, click on one of the examples, or adjust the values of the factors, and click on Analyze. 🤞
"""
with gr.Blocks(title=title) as demo:
gr.Markdown(f"## {title}")
gr.Markdown(description1)
gr.Markdown("""---""")
gr.Markdown(description2)
gr.Markdown("""---""")
with gr.Row():
with gr.Column():
age = gr.Number(label="age Score", value=40)
sex = gr.Dropdown(label="Sex", choices = ["Female", "Male"], type = "index")
cp = gr.Dropdown(label="cp Score", choices = ["0", "1","2","3"], type = "index", value = "1",
info = "Value 1: typical angina Value 2: atypical angina Value 3: non-anginal pain Value 4: asymptomatic trtbps : resting blood pressure (in mm Hg)")
with gr.Column():
trtbps = gr.Number(label="trtbps Score", value=100, step=1, info = "The person's resting blood pressure (mm Hg on admission to the hospital)")
chol = gr.Number(label="chol Score", value=130, info = "cholestoral in mg/dl fetched via BMI sensor" )
fbs = gr.Dropdown(label="fbs Score", choices = ["0", "1"], type = "index", value = "1")
restecg = gr.Dropdown(label="restecg Score", choices = ["0", "1","2"], type = "index", value = "1", info = "resting electrocardiographic results")
thall = gr.Dropdown(label="thall Score", choices = ["0", "1","2","3"], type = "index", value = "1")
with gr.Column():
thalachh = gr.Number(label="thalachh Score", value=100)
exng = gr.Dropdown(label="exng Score", choices = ["0", "1"], type = "index", value = "1")
oldpeak = gr.Slider(label="oldpeak Score", minimum=0, maximum=10, value=4, step=.1)
slp = gr.Dropdown(label="slp Score", choices = ["0","1","2"], type = "index", value = "1")
caa = gr.Dropdown(label="caa Score", choices = ["0", "1","2","3","4"], type = "index", value = "1")
submit_btn = gr.Button("Analyze")
with gr.Column(visible=True) as output_col:
label = gr.Label(label = "Predicted Label")
local_plot = gr.Plot(label = 'Shap:')
submit_btn.click(
main_func,
[age, sex, cp, trtbps, chol, fbs, restecg, thalachh,exng,oldpeak,slp,caa,thall],
[label,local_plot], api_name="Heart_Predictor"
)
gr.Markdown("### Click on any of the examples below to see how it works:")
gr.Examples([[24,0,4,4,5,5,4,4,5,5,1,2,3], [24,0,4,4,5,3,3,2,1,1,1,2,3]], [age, sex, cp, trtbps, chol, fbs, restecg, thalachh,exng,oldpeak,slp,caa,thall], [label,local_plot], main_func, cache_examples=True)
demo.launch()