| import pickle |
| import pandas as pd |
| import shap |
| from shap.plots._force_matplotlib import draw_additive_plot |
| import gradio as gr |
| import numpy as np |
| import matplotlib.pyplot as plt |
|
|
| |
| loaded_model = pickle.load(open("heart_xgb.pkl", 'rb')) |
|
|
| |
| explainer = shap.Explainer(loaded_model) |
|
|
| |
| def main_func(age, sex, cp, trtbps, chol, fbs, restecg, thalachh,exng,oldpeak,slp,caa,thall): |
| new_row = pd.DataFrame.from_dict({'age':age,'sex':sex, |
| 'cp':cp,'trtbps':trtbps,'chol':chol, |
| 'fbs':fbs, 'restecg':restecg,'thalachh':thalachh,'exng':exng, |
| 'oldpeak':oldpeak,'slp':slp,'caa':caa,'thall':thall}, |
| orient = 'index').transpose() |
| |
| prob = loaded_model.predict_proba(new_row) |
| |
| shap_values = explainer(new_row) |
| |
| |
| plot = shap.plots.bar(shap_values[0], max_display=6, order=shap.Explanation.abs, show_data='auto', show=False) |
|
|
| plt.tight_layout() |
| local_plot = plt.gcf() |
| plt.close() |
| |
| return {"Low Chance": float(prob[0][0]), "High Chance": 1-float(prob[0][0])}, local_plot |
|
|
| |
| title = "**Heart Attack Predictor & Interpreter** 🪐 TEAM 7" |
| description1 = """This app takes info from subjects and predicts their heart attack likelihood. Do not use for medical diagnosis.""" |
|
|
| description2 = """ |
| To use the app, click on one of the examples, or adjust the values of the factors, and click on Analyze. 🤞 |
| """ |
|
|
| with gr.Blocks(title=title) as demo: |
| gr.Markdown(f"## {title}") |
| gr.Markdown(description1) |
| gr.Markdown("""---""") |
| gr.Markdown(description2) |
| gr.Markdown("""---""") |
|
|
| with gr.Row(): |
| with gr.Column(): |
| age = gr.Number(label="age Score", value=40) |
| sex = gr.Dropdown(label="Sex", choices = ["Female", "Male"], type = "index") |
| cp = gr.Dropdown(label="cp Score", choices = ["0", "1","2","3"], type = "index", value = "1", |
| info = "Value 1: typical angina Value 2: atypical angina Value 3: non-anginal pain Value 4: asymptomatic trtbps : resting blood pressure (in mm Hg)") |
| with gr.Column(): |
| trtbps = gr.Number(label="trtbps Score", value=100, step=1, info = "The person's resting blood pressure (mm Hg on admission to the hospital)") |
| chol = gr.Number(label="chol Score", value=130, info = "cholestoral in mg/dl fetched via BMI sensor" ) |
| fbs = gr.Dropdown(label="fbs Score", choices = ["0", "1"], type = "index", value = "1") |
| restecg = gr.Dropdown(label="restecg Score", choices = ["0", "1","2"], type = "index", value = "1", info = "resting electrocardiographic results") |
| thall = gr.Dropdown(label="thall Score", choices = ["0", "1","2","3"], type = "index", value = "1") |
| |
| with gr.Column(): |
| thalachh = gr.Number(label="thalachh Score", value=100) |
| exng = gr.Dropdown(label="exng Score", choices = ["0", "1"], type = "index", value = "1") |
| oldpeak = gr.Slider(label="oldpeak Score", minimum=0, maximum=10, value=4, step=.1) |
| slp = gr.Dropdown(label="slp Score", choices = ["0","1","2"], type = "index", value = "1") |
| caa = gr.Dropdown(label="caa Score", choices = ["0", "1","2","3","4"], type = "index", value = "1") |
| |
| |
| submit_btn = gr.Button("Analyze") |
|
|
| with gr.Column(visible=True) as output_col: |
| label = gr.Label(label = "Predicted Label") |
| local_plot = gr.Plot(label = 'Shap:') |
|
|
| submit_btn.click( |
| main_func, |
| [age, sex, cp, trtbps, chol, fbs, restecg, thalachh,exng,oldpeak,slp,caa,thall], |
| [label,local_plot], api_name="Heart_Predictor" |
| ) |
| |
| gr.Markdown("### Click on any of the examples below to see how it works:") |
| gr.Examples([[24,0,4,4,5,5,4,4,5,5,1,2,3], [24,0,4,4,5,3,3,2,1,1,1,2,3]], [age, sex, cp, trtbps, chol, fbs, restecg, thalachh,exng,oldpeak,slp,caa,thall], [label,local_plot], main_func, cache_examples=True) |
|
|
| demo.launch() |