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app.py
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| 1 |
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"""
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| 2 |
+
Tokenization Impact on Retrieval β TREC-COVID Demo
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| 3 |
+
HuggingFace Spaces / Gradio
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| 4 |
+
"""
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| 5 |
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| 6 |
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import re
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| 7 |
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import gradio as gr
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| 8 |
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from datasets import load_dataset
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| 9 |
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from rank_bm25 import BM25Okapi
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| 10 |
+
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| 11 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
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| 12 |
+
# 1. CORPUS Δ°NDΔ°R & Δ°NDEKS KUR (uygulama baΕlarken bir kere)
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| 13 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
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| 14 |
+
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| 15 |
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print("TREC-COVID corpus indiriliyor...")
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| 16 |
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corpus_ds = load_dataset("BeIR/trec-covid", "corpus", split="corpus")
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| 17 |
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| 18 |
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corpus_title = {}
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corpus_dict = {}
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| 20 |
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for doc in corpus_ds:
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did = str(doc["_id"])
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title = doc["title"] if doc["title"] else doc["text"][:120]
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corpus_title[did] = title
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corpus_dict[did] = title + " " + doc["text"]
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| 25 |
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doc_ids = list(corpus_dict.keys())
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doc_texts = [corpus_dict[did] for did in doc_ids]
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print(f"Corpus hazir: {len(doc_ids):,} dokuman")
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| 29 |
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# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
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| 32 |
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# 2. TOKENΔ°ZERS
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| 33 |
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# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
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| 34 |
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| 35 |
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def whitespace_tokenize(text):
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| 36 |
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return re.findall(r'\b[a-z]+\b', text.lower())
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| 37 |
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| 38 |
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| 39 |
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_SUFFIXES = [
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| 40 |
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'ization', 'isation', 'ation', 'tion', 'sion', 'ment', 'ness',
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| 41 |
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'ity', 'ical', 'ous', 'ful', 'less', 'ize', 'ise',
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| 42 |
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'ing', 'al', 'er', 'est', 'ly', 'ed',
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| 43 |
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]
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| 44 |
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| 45 |
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def bert_tokenize(text):
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| 46 |
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tokens = []
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for word in re.findall(r"[a-z]+(?:-[a-z]+)*", text.lower()):
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| 48 |
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for part in word.split('-'):
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matched = False
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| 50 |
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for suf in sorted(_SUFFIXES, key=len, reverse=True):
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| 51 |
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if len(part) > len(suf) + 2 and part.endswith(suf):
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| 52 |
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tokens.append(part[:-len(suf)])
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| 53 |
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tokens.append('##' + suf)
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| 54 |
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matched = True
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| 55 |
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break
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| 56 |
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if not matched:
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tokens.append(part)
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return tokens
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| 59 |
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| 60 |
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| 61 |
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# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
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| 62 |
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# 3. BM25 Δ°NDEKSLERΔ°
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| 63 |
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# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
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| 64 |
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| 65 |
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print("BM25 indeksleri kuruluyor (birkaΓ§ dakika)...")
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| 66 |
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bm25_ws = BM25Okapi([whitespace_tokenize(t) for t in doc_texts])
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| 67 |
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bm25_bert = BM25Okapi([bert_tokenize(t) for t in doc_texts])
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| 68 |
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print("Hazir!")
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| 69 |
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| 70 |
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| 71 |
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# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
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| 72 |
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# 4. RETRIEVAL
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| 73 |
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# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
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| 74 |
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| 75 |
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def retrieve(bm25, tokenize_fn, query, top_k=5):
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tokens = tokenize_fn(query)
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| 77 |
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scores = bm25.get_scores(tokens)
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| 78 |
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ranked = sorted(enumerate(scores), key=lambda x: x[1], reverse=True)
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| 79 |
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return [(doc_ids[i], corpus_title[doc_ids[i]], round(s, 2)) for i, s in ranked[:top_k]]
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| 80 |
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| 81 |
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| 82 |
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# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
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| 83 |
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# 5. GRADIO ARAYΓZ
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| 84 |
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# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
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| 85 |
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| 86 |
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def search(query):
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| 87 |
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if not query.strip():
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| 88 |
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return "Query boΕ olamaz.", "Query boΕ olamaz."
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| 89 |
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| 90 |
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ws_tokens = whitespace_tokenize(query)
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| 91 |
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bert_tokens = bert_tokenize(query)
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| 92 |
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ws_results = retrieve(bm25_ws, whitespace_tokenize, query)
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| 93 |
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bert_results = retrieve(bm25_bert, bert_tokenize, query)
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| 94 |
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| 95 |
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def format_tokens(tokens, style):
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| 96 |
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if style == "ws":
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return " | ".join(f"`{t}`" for t in tokens)
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| 98 |
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else:
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parts = []
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| 100 |
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for t in tokens:
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| 101 |
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if t.startswith("##"):
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| 102 |
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parts.append(f"**`{t}`**")
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| 103 |
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else:
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| 104 |
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parts.append(f"`{t}`")
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| 105 |
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return " | ".join(parts)
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| 106 |
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| 107 |
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def format_results(results):
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| 108 |
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lines = []
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| 109 |
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for i, (did, title, score) in enumerate(results, 1):
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| 110 |
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lines.append(f"**{i}.** {title} \n`score: {score}`")
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| 111 |
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return "\n\n---\n\n".join(lines)
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| 112 |
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| 113 |
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ws_out = f"### β¬ Whitespace Tokens\n{format_tokens(ws_tokens, 'ws')}\n\n---\n\n"
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| 114 |
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ws_out += f"### Top-5 SonuΓ§lar\n\n{format_results(ws_results)}"
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| 115 |
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| 116 |
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bert_out = f"### π· BERT-style Tokens\n{format_tokens(bert_tokens, 'bert')}\n\n---\n\n"
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| 117 |
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bert_out += f"### Top-5 SonuΓ§lar\n\n{format_results(bert_results)}"
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| 118 |
+
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| 119 |
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return ws_out, bert_out
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| 120 |
+
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| 121 |
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| 122 |
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examples = [
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| 123 |
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"what is the origin of COVID-19",
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| 124 |
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"how does coronavirus spread among people",
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| 125 |
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"COVID-19 symptoms fever cough loss of smell",
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| 126 |
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"remdesivir antiviral treatment efficacy",
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| 127 |
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"vaccine mRNA clinical trial efficacy",
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| 128 |
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"coronavirus incubation period transmission",
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| 129 |
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"comorbidities risk factors severe COVID",
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| 130 |
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]
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| 131 |
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| 132 |
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with gr.Blocks(theme=gr.themes.Soft(), title="Tokenization Impact on Retrieval") as demo:
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| 133 |
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gr.Markdown("""
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| 134 |
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# π Tokenization Impact on Retrieval Quality
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| 135 |
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**TREC-COVID Β· BM25 Β· Whitespace vs BERT-style Tokenization**
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| 136 |
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| 137 |
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Assignment 15 β Information Retrieval
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| 138 |
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""")
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| 139 |
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| 140 |
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with gr.Row():
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| 141 |
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query_input = gr.Textbox(
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| 142 |
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placeholder="e.g. how does coronavirus spread among people",
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| 143 |
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label="Query",
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| 144 |
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scale=5,
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| 145 |
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)
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| 146 |
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search_btn = gr.Button("Search π", variant="primary", scale=1)
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| 147 |
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| 148 |
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gr.Examples(examples=examples, inputs=query_input, label="Example Queries")
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| 149 |
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| 150 |
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with gr.Row():
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| 151 |
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ws_output = gr.Markdown(label="β¬ Whitespace BM25")
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| 152 |
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bert_output = gr.Markdown(label="π· BERT-style BM25")
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| 153 |
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| 154 |
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search_btn.click(fn=search, inputs=query_input, outputs=[ws_output, bert_output])
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| 155 |
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query_input.submit(fn=search, inputs=query_input, outputs=[ws_output, bert_output])
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| 156 |
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| 157 |
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demo.launch()
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