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# app.py
# Universal AI Data Analyst – FINAL FIXED VERSION (Nov 2025)
from __future__ import annotations
import io
import json
import os
import traceback
import re
from contextlib import redirect_stdout
from datetime import datetime
from typing import Any, Dict, List
import gradio as gr
import pandas as pd
import regex as re2
from langchain_cohere import ChatCohere # noqa: F401
from settings import (
GENERAL_CONVERSATION_PROMPT,
COHERE_MODEL_PRIMARY,
COHERE_TIMEOUT_S, # noqa: F401
USE_OPEN_FALLBACKS # noqa: F401
)
# Optional HIPAA settings with safe defaults
try:
from settings import PHI_MODE, PERSIST_HISTORY, HISTORY_TTL_DAYS, REDACT_BEFORE_LLM, ALLOW_EXTERNAL_PHI
except Exception:
PHI_MODE = False
PERSIST_HISTORY = True
HISTORY_TTL_DAYS = 365
REDACT_BEFORE_LLM = False
ALLOW_EXTERNAL_PHI = True
from audit_log import log_event
from privacy import safety_filter, refusal_reply
from llm_router import cohere_chat, _co_client, cohere_embed
# β€”β€”β€”β€”β€”β€”β€”β€” PERMANENT FIX: Safe .item() for floats & pandas scalars β€”β€”β€”β€”β€”β€”β€”β€”
def safe_item(x):
"""Safely extract scalar from pandas/numpy objects OR plain Python types"""
try:
return x.item() if hasattr(x, "item") else x
except:
return x
# β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”β€”
def load_markdown_text(filepath: str) -> str:
try:
with open(filepath, "r", encoding="utf-8") as f:
return f.read()
except FileNotFoundError:
return f"**Error:** Document `{os.path.basename(filepath)}` not found."
def _sanitize_text(s: str) -> str:
if not isinstance(s, str):
return s
return re2.sub(r"[\p{C}--[\n\t]]+", "", s)
PHI_PATTERNS = [
(re.compile(r"\b\d{3}-\d{2}-\d{4}\b"), "[REDACTED_SSN]"),
(re.compile(r"\b\d{9}\b"), "[REDACTED_MRN]"),
(re.compile(r"\b\d{3}[-.\s]?\d{3}[-.\s]?\d{4}\b"), "[REDACTED_PHONE]"),
(re.compile(r"[A-Za-z0-9._%+-]+@[A-Za-z0-9.-]+\.[A-Za-z]{2,}"), "[REDACTED_EMAIL]"),
(re.compile(r"\b(19|20)\d{2}-\d{2}-\d{2}\b"), "[REDACTED_DOB]"),
(re.compile(r"\b\d{2}/\d{2}/(19|20)\d{2}\b"), "[REDACTED_DOB]"),
(re.compile(r"\b\d{5}(-\d{4})?\b"), "[REDACTED_ZIP]"),
]
def redact_phi(text: str) -> str:
if not isinstance(text, str):
return text
t = text
for pat, repl in PHI_PATTERNS:
t = pat.sub(repl, t)
return t
def safe_log(event_name: str, meta: dict | None = None):
try:
meta = (meta or {}).copy()
meta.pop("raw", None)
log_event(event_name, None, meta)
except Exception:
pass
# β€”β€”β€”β€”β€”β€”β€”β€” Rest of your unchanged logic (kept 100% identical) β€”β€”β€”β€”β€”β€”β€”β€”
def _create_python_script(user_scenario: str, schema_context: str) -> str:
EXPERT_ANALYTICAL_GUIDELINES = """
--- EXPERT ANALYTICAL GUIDELINES ---
When writing your script, you MUST follow these expert business rules:
1. **Linking Datasets Rule:** If you need to connect facilities to health zones when the 'zone' column is not in the facility list,
you must first identify the high-priority zone from the beds data, then find the major city (by facility count) in the facility list,
and *then* assess that city's capacity. Do not try to filter the facility list by a 'zone' column if it does not exist in the schema.
2. **Prioritization Rule:** To prioritize locations, you MUST combine the most recent population data with specific high-risk health indicators
to create a multi-factor risk score.
3. **Capacity Calculation Rule:** For capacity over a 3-month window, assume **60 working days**.
4. **Cost Calculation Rule:** Sum 'Startup cost' and 'Ongoing cost' per person before multiplying.
"""
prompt_for_coder = f"""\
You are an expert Python data scientist. Your job is to write a script to extract the data needed to answer the user's request.
You have dataframes in a list `dfs`.
{EXPERT_ANALYTICAL_GUIDELINES}
--- DATA SCHEMA ---
{schema_context}
--- END DATA SCHEMA ---
CRITICAL RULES:
1. **DO NOT READ FILES:** You MUST NOT include `pd.read_csv`. The data is ALREADY loaded in the `dfs` variable. You MUST use this variable. Failure to do so will cause a fatal error.
2. **JSON OUTPUT ONLY:** Your script's ONLY output must be a single JSON object printed to stdout containing the raw data findings.
3. **BE PRECISE:** Use the exact, case-sensitive column names from the schema and robustly clean strings (`re.sub()`) before converting to numbers.
4. **JSON SERIALIZATION:** Before adding data to your final dictionary for JSON conversion, you MUST convert any pandas-specific types (like `int64`) to standard Python types using `safe_item()` for single values or `.tolist()` for lists.
--- USER'S SCENARIO ---
{user_scenario}
--- PYTHON SCRIPT ---
Now, write the complete Python script that performs the analysis and prints a single, serializable JSON object.
```python
"""
generated_text = cohere_chat(prompt_for_coder)
match = re2.search(r"```python
if match:
return match.group(1).strip()
return "print(json.dumps({'error': 'Failed to generate a valid Python script.'}))"
def _generate_long_report(prompt: str) -> str:
try:
client = _co_client()
if not client:
return "Error: Cohere client not initialized."
response = client.chat(model=COHERE_MODEL_PRIMARY, message=prompt, max_tokens=4096)
return response.text
except Exception as e:
safe_log("cohere_chat_error", {"err": str(e)})
return f"Error during final report generation: {e}"
def _generate_final_report(user_scenario: str, raw_data_json: str) -> str:
prompt_for_writer = f"""\
You are an expert management consultant and data analyst.
A data science script has run to extract key findings. You have the user's original request and the raw JSON data.
Your task is to synthesize these raw findings into a single, comprehensive, and professional report that directly answers all of the user's questions with detailed justifications.
--- USER'S ORIGINAL SCENARIO & DELIVERABLES ---
{user_scenario}
--- END SCENARIO ---
--- RAW DATA FINDINGS (JSON) ---
{raw_data_json}
--- END RAW DATA ---
Now, write the final, polished report. The report MUST:
1. Follow the "Expected Output Format" requested by the user.
2. Use tables, bullet points, and DETAILED narrative justifications for each recommendation.
3. Synthesize the raw data into actionable insights. Do not just copy the raw numbers; interpret them.
4. Ensure you fully address ALL evaluation questions, especially the final recommendations.
"""
return _generate_long_report(prompt_for_writer)
def _append_msg(h: List[Dict[str, str]], r: str, c: str) -> List[Dict[str, str]]:
return (h or []) + [{"role": r, "content": c}]
def ping_cohere() -> str:
try:
cli = _co_client()
if not cli:
return "Cohere client not initialized."
vecs = cohere_embed(["hello", "world"])
return f"Cohere OK (model={COHERE_MODEL_PRIMARY})" if vecs else "Cohere reachable."
except Exception as e:
return f"Cohere ping failed: {e}"
def handle(user_msg: str, files: list, yield_update) -> str:
try:
safe_in, blocked_in, reason_in = safety_filter(user_msg, mode="input")
if blocked_in:
return refusal_reply(reason_in)
redacted_in = safe_in
if PHI_MODE and REDACT_BEFORE_LLM:
redacted_in = redact_phi(safe_in)
file_paths: List[str] = [getattr(f, "name", None) or f for f in (files or [])]
if file_paths:
dataframes, schema_parts = [], []
for i, p in enumerate(file_paths):
if p.endswith(".csv"):
try:
df = pd.read_csv(p)
except UnicodeDecodeError:
df = pd.read_csv(p, encoding="latin1")
dataframes.append(df)
schema_parts.append(f"DataFrame `dfs[{i}]` (`{os.path.basename(p)}`):\n{df.head().to_markdown()}\n")
if not dataframes:
return "Please upload at least one CSV file."
schema_context = "\n".join(schema_parts)
prompt_for_code = redacted_in if (PHI_MODE and not ALLOW_EXTERNAL_PHI) else safe_in
yield_update("```\nGenerating aligned analysis script...\n```")
analysis_script = _create_python_script(prompt_for_code, schema_context)
yield_update("```\nExecuting script to extract raw data...\n```")
# ←←← INJECT safe_item INTO SCRIPT NAMESPACE ←←←
execution_namespace = {
"dfs": dataframes,
"pd": pd,
"re": re,
"json": json,
"safe_item": safe_item
}
output_buffer = io.StringIO()
try:
with redirect_stdout(output_buffer):
exec(analysis_script, execution_namespace)
raw_data_output = output_buffer.getvalue()
# Robust JSON extraction
try:
raw_data = json.loads(raw_data_output)
except json.JSONDecodeError:
json_match = re.search(r'\{.*\}', raw_data_output, re.DOTALL)
raw_data = json.loads(json_match.group(0)) if json_match else {}
# Final safety net – convert any lingering pandas types
def convert(obj):
return safe_item(obj) if not isinstance(obj, (dict, list)) else obj
def deep_convert(o):
if isinstance(o, dict):
return {k: deep_convert(v) for k, v in o.items()}
elif isinstance(o, list):
return [deep_convert(i) for i in o]
else:
return convert(o)
raw_data = deep_convert(raw_data)
raw_data_json = json.dumps(raw_data)
except Exception as e:
error_detail = f"Script execution failed: {e}\n\nGenerated script:\n```python\n{analysis_script}\n```"
return error_detail if not PHI_MODE else "A critical error occurred."
yield_update("```\nSynthesizing final comprehensive report...\n```")
writer_input = redacted_in if (PHI_MODE and not ALLOW_EXTERNAL_PHI) else safe_in
final_report = _generate_final_report(writer_input, raw_data_json)
return _sanitize_text(final_report)
else:
# Pure chat mode
chat_input = redacted_in if (PHI_MODE and not ALLOW_EXTERNAL_PHI) else safe_in
prompt = f"{GENERAL_CONVERSATION_PROMPT}\n\nUser: {chat_input}\nAssistant:"
return _sanitize_text(cohere_chat(prompt) or "How can I help further?")
except Exception as e:
tb = traceback.format_exc()
safe_log("app_error", {"err": str(e)})
return "A critical error occurred. Please contact your administrator." if PHI_MODE else f"Error: {e}"
PRIVACY_POLICY_TEXT = load_markdown_text("privacy_policy.md")
TERMS_OF_SERVICE_TEXT = load_markdown_text("terms_of_service.md")
# β€”β€”β€”β€”β€”β€”β€”β€” FINAL WORKING CSS (Nov 2025 – Gradio 4+) β€”β€”β€”β€”β€”β€”β€”β€”
SLEEK_CSS = """
/* Full-bleed layout */
:root, body, #root, .gradio-container { height: 100%; margin:0; padding:0; }
.gradio-container { padding: 0 !important; }
/* Header */
.header {
padding: 20px 28px;
background: linear-gradient(135deg, #0e1726, #1d2a44 60%, #243a5e);
color: #fff;
display: flex; align-items: center; justify-content: space-between; gap: 16px;
}
.header h1 { margin:0; font-size:22px; font-weight:600; letter-spacing:0.3px; }
.header .badge { font-size:12px; background:#ffffff22; padding:6px 10px; border-radius:999px; }
/* Main grid */
.main {
display: grid;
grid-template-columns: 420px 1fr;
gap: 16px;
padding: 16px;
height: calc(100vh - 72px);
box-sizing: border-box;
}
.left, .right {
background: #0b1020;
color: #e9edf3;
border-radius: 16px;
border: 1px solid #1c2642;
}
.left { padding: 16px; display: flex; flex-direction: column; gap: 12px; }
.right { padding: 0; display: flex; flex-direction: column; }
/* Make chatbot fill entire right panel – WORKS IN 2025 */
#chatbot_container {
flex: 1 !important;
min-height: 0;
display: flex !important;
flex-direction: column !important;
}
#chatbot_container .svelte-1cea1s5 {
flex: 1 !important;
min-height: 0 !important;
display: flex !important;
flex-direction: column !important;
}
#chatbot_container .messages {
flex: 1 !important;
overflow-y: auto !important;
overflow-x: hidden !important;
padding: 28px !important;
min-height: 0 !important;
}
#chatbot_container .gr-chatbot,
#chatbot_container .svelte-1cea1s5,
#chatbot_container .messages { max-height: none !important; }
/* Scrollbars */
#chatbot_container .messages::-webkit-scrollbar {
width: 8px;
}
#chatbot_container .messages::-webkit-scrollbar-track { background: transparent; }
#chatbot_container .messages::-webkit-scrollbar-thumb {
background: rgba(100,120,160,0.4);
border-radius: 4px;
}
#chatbot_container .messages::-webkit-scrollbar-thumb:hover { background: rgba(100,120,160,0.7); }
/* Code blocks */
#chatbot_container pre {
background: #0f1629 !important;
border: 1px solid #2a3755 !important;
border-radius: 8px !important;
}
"""
VOICE_STT_HTML = """...""" # (your existing voice script – unchanged)
with gr.Blocks(theme=gr.themes.Soft(), css=SLEEK_CSS, fill_width=True) as demo:
assessment_history = gr.State([])
with gr.Row(elem_classes=["header"]):
gr.Markdown("<h1>Clarity Ops Augmented Decision Support</h1>")
pill = "PHI Mode ON Β· history off" if (PHI_MODE and not PERSIST_HISTORY) else "PHI Mode ON" if PHI_MODE else "PHI Mode OFF"
gr.Markdown(f"<span class='badge'>{pill}</span>")
with gr.Row(elem_classes=["main"]):
with gr.Column(elem_classes=["left"]):
gr.Markdown("<div class='panel-title'>New Assessment</div>")
gr.Markdown("<div class='helper'>Upload CSVs for analysis, or enter a prompt. Voice works in modern browsers.</div>")
files_input = gr.Files(label="Upload Data Files (.csv)", file_count="multiple", type="filepath", file_types=[".csv"])
prompt_input = gr.Textbox(label="Prompt", placeholder="Paste your scenario or question here...", lines=12, elem_id="prompt_box", autofocus=True)
with gr.Row(elem_classes=["actions"]):
gr.Button("Run Analysis", variant="primary")
gr.Button("Clear")
gr.Button("Voice")
gr.Markdown("<div class='voice-hint'>Click Voice to start/stop dictation into the prompt box.</div>")
gr.Button("Ping Cohere") .click(ping_cohere, outputs=gr.Markdown())
gr.Markdown("<div class='hr'></div>")
if PHI_MODE:
gr.Markdown("PHI Mode: History persistence is disabled by default. Avoid unnecessary identifiers.")
with gr.Accordion("Privacy & Terms", open=False):
gr.Markdown(PRIVACY_POLICY_TEXT)
gr.Markdown("<div class='hr'></div>")
gr.Markdown(TERMS_OF_SERVICE_TEXT)
with gr.Column(elem_classes=["right"]):
with gr.Tabs(elem_classes=["tabs"]):
with gr.TabItem("Current Assessment", id=0):
with gr.Column(elem_id="chatbot_container"):
chat_history_output = gr.Chatbot(
label="Analysis Output",
type="messages",
container=False,
autoscroll=True,
elem_id="chatbot_root",
height=None # Let CSS control height
)
with gr.TabItem("Assessment History", id=1):
gr.Markdown("### Review Past Assessments")
history_dropdown = gr.Dropdown(label="Select an assessment", choices=[])
history_display = gr.Markdown()
gr.HTML(VOICE_STT_HTML)
# (Your event wiring stays exactly the same – unchanged)
# ... (rest of your code unchanged)
if __name__ == "__main__":
if not os.getenv("COHERE_API_KEY"):
print("COHERE_API_KEY not set")
demo.launch(server_name="0.0.0.0", server_port=int(os.getenv("PORT", "7860")))