MicroscopyMatching / requirements.txt
phoebehxf
init
aff3c6f
# PyTorch 2.4.1 + torchvision
torch==2.4.1
torchvision==0.19.1
torchaudio==2.4.1
# Core dependencies
diffusers==0.29.0
transformers==4.41.0 # ✅ This version supports huggingface-hub 1.x
accelerate==0.23.0
pyrallis
easydict
omegaconf==2.1.1
einops==0.3.0
torch-fidelity==0.3.0
torchmetrics==1.3.0
pytorch-lightning==2.2.0
taming-transformers @ git+https://github.com/CompVis/taming-transformers.git@master
clip @ git+https://github.com/OpenAI/CLIP.git@main
# Computer vision
opencv-python==4.5.5.64
opencv-python-headless==4.5.5.64
kornia==0.7.1
albumentations==0.4.3
imageio>=2.27
imageio-ffmpeg==0.4.2
matplotlib
scikit-image==0.21.0
Pillow
segment-anything
numpy==1.24.4
# Gradio
gradio
gradio-bbox-annotator
# Utilities
natsort
roifile
fill-voids
configargparse
ipywidgets
ftfy
sniffio
websocket-client
dask
tensorboard
joblib
lz4
numba
edt
imagecodecs