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# ๐ฌ ViTAMIn-O: Vision-based Tools for Automated Microscopy in Organoids
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Welcome to the official model hub for **ViTAMIn-O**. This organization serves as an open-science database for customized, vision-based deep learning models specifically trained for organoid classification, prediction, and concept discovery.
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[](https://colab.research.google.com/drive/1cpPTiMLglTXw759Z59Fd3HQCoE7qnvL5?usp=sharing)
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## ๐ About the Framework
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ViTAMIn-O is a code-free, Colab-based infrastructure designed to democratize deep learning for biological researchers. Without prior coding experience, researchers can seamlessly upload imaging datasets, fine-tune state-of-the-art vision foundation models (like Swin and DINOv2), and discover novel biological concepts using our OrgACE pipeline.
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## ๐๏ธ The Model Database
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This hub hosts models trained by the community. You can explore the models via our **Collections**, which categorize models by organoid type (e.g., Ductal, Intestinal, Cerebral) and task (Linear Probing vs. Fine-Tuning).
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### How to Contribute
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We encourage researchers to share their specialized models!
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1. Open the [ViTAMIn-O Colab Dashboard](YOUR_COLAB_LINK_HERE).
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2. Train your custom model using your dataset.
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3. Check the **"Upload to Hugging Face"** box in the UI.
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4. Input your personal HF Token and the target Repo Name.
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5. Once your model is on your personal profile, request to add it to one of our Collections!
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## ๐ Citation
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If you use the ViTAMIn-O framework or any models hosted in this hub, please cite our paper:
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> *[Author Names], "ViTAMIn-O: [Full Paper Title]," [Journal Name], 2026. [DOI Link]*
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