Update app.py

app.py

@@ -36,11 +36,11 @@ def render_mol(pdb):
 
 def perform_blast_analysis(sequence):
     st.subheader('Protein Analysis')
-    with st.spinner("Analyzing generated protein... This may take a several minutes. Stay tuned!"):
+    with st.spinner("Analyzing generated protein... This may take several minutes. Stay tuned!"):
         progress_bar = st.progress(0)
         for i in range(100):
             progress_bar.progress(i + 1)
-            time.sleep(0.1)  # Simulate analysis time
+            time.sleep(0.4)  # Analysis time
         
         try:
             record = SeqRecord(Seq(sequence), id='random_protein')
@@ -58,23 +58,18 @@ def perform_blast_analysis(sequence):
                 organism = title_parts[-2].split('OS=')[-1].split('OX=')[0].strip()
                 
                 # Calculate identity percentage
-                identity_percentage = (hsp.identities / alignment.length) * 100
+                identity_percentage = (hsp.identities / hsp.align_length) * 100
                 
                 st.write(f"**Top Match:** {protein_name}")
-                st.write(f"**Organism Code:** {organism}")
+                st.write(f"**Organism:** {organism}")
                 st.write(f"**Sequence Identity Match:** {identity_percentage:.2f}%")
-               
                 
                 # Fetch protein function (if available)
                 if hasattr(alignment, 'description') and alignment.description:
                     st.write(f"**Potential Function:** {alignment.description}")
-                
-                if hasattr(alignment, 'description') and alignment.description:
-                    
-                st.write(f"**Potential Function:** {alignment.description}")
                 else:
-                st.write("No significant matches found in the database. This might be a unique protein sequence!")                 
-
+                    st.write("No significant matches found in the database. This might be a unique protein sequence!")
+            
 def update(sequence, word1, word2, word3, sequence_length):
     headers = {
         'Content-Type': 'application/x-www-form-urlencoded',