Spaces:
Build error
Build error
File size: 11,259 Bytes
4a8d0a9 19a407b 4a8d0a9 19a407b 4a8d0a9 19a407b 4a8d0a9 19a407b 4a8d0a9 19a407b 4a8d0a9 19a407b 5195523 19a407b 5195523 4a8d0a9 19a407b 4a8d0a9 19a407b 4a8d0a9 19a407b 4a8d0a9 19a407b 4a8d0a9 19a407b 4a8d0a9 19a407b 4a8d0a9 19a407b 4a8d0a9 19a407b 5195523 19a407b 4a8d0a9 19a407b 4a8d0a9 19a407b 5195523 19a407b 5195523 19a407b 4a8d0a9 19a407b 4a8d0a9 19a407b 4a8d0a9 19a407b 4a8d0a9 5195523 19a407b 4a8d0a9 19a407b 4a8d0a9 19a407b 4a8d0a9 19a407b 4a8d0a9 19a407b 4a8d0a9 19a407b 4a8d0a9 19a407b 4a8d0a9 5195523 19a407b 5195523 19a407b 5195523 19a407b 5195523 4a8d0a9 19a407b 5195523 19a407b 5195523 19a407b 5195523 19a407b 5195523 19a407b 5195523 19a407b 4a8d0a9 19a407b 4a8d0a9 19a407b 5195523 19a407b 4a8d0a9 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 | import streamlit as st
import os
import re
import json
import base64
from datetime import datetime
from dotenv import load_dotenv
# Load environment variables
load_dotenv()
# Page configuration - MUST be first Streamlit command
st.set_page_config(
page_title="MediScan AI - Understand Your Medical Reports",
page_icon="π©Ί",
layout="wide",
initial_sidebar_state="expanded"
)
# Import libraries after page config
try:
import pdfplumber
except ImportError:
st.error("pdfplumber not installed. Please check requirements.")
st.stop()
try:
from groq import Groq
except ImportError:
st.error("groq not installed. Please check requirements.")
st.stop()
try:
from PIL import Image
except ImportError:
st.error("Pillow not installed. Please check requirements.")
st.stop()
try:
import pytesseract
except ImportError:
st.warning("pytesseract not fully configured. OCR may not work properly.")
pytesseract = None
# Custom CSS
st.markdown("""
<style>
.main-header {
font-size: 2.5rem;
color: #2c3e50;
text-align: center;
margin-bottom: 1rem;
}
.sub-header {
font-size: 1.2rem;
color: #7f8c8d;
text-align: center;
margin-bottom: 2rem;
}
.alert-box {
background-color: #fee2e2;
padding: 1rem;
border-radius: 10px;
border-left: 5px solid #ef4444;
margin: 1rem 0;
}
.info-box {
background-color: #e0f2fe;
padding: 1rem;
border-radius: 10px;
border-left: 5px solid #3b82f6;
margin: 1rem 0;
}
.success-box {
background-color: #dcfce7;
padding: 1rem;
border-radius: 10px;
border-left: 5px solid #22c55e;
margin: 1rem 0;
}
.stButton > button {
background-color: #2c3e50;
color: white;
font-weight: bold;
width: 100%;
}
</style>
""", unsafe_allow_html=True)
# Initialize Groq client
GROQ_API_KEY = os.getenv("GROQ_API_KEY")
def extract_text_from_pdf(uploaded_file):
"""Extract text from PDF using pdfplumber"""
try:
text = ""
with pdfplumber.open(uploaded_file) as pdf:
for page in pdf.pages:
page_text = page.extract_text()
if page_text:
text += page_text + "\n"
return text if text.strip() else None
except Exception as e:
st.error(f"Error reading PDF: {str(e)}")
return None
def extract_text_from_image(uploaded_file):
"""Extract text from image using Tesseract OCR"""
try:
if pytesseract is None:
st.error("Tesseract OCR is not configured")
return None
image = Image.open(uploaded_file)
# Convert to grayscale for better OCR
image = image.convert('L')
text = pytesseract.image_to_string(image, config='--psm 3')
return text if text.strip() else None
except Exception as e:
st.error(f"Error reading image: {str(e)}")
return None
def analyze_medical_report(report_text, language="english"):
"""Analyze medical report using Groq API"""
if not GROQ_API_KEY:
return {"error": "GROQ_API_KEY not set. Please add your API key to Secrets."}
try:
client = Groq(api_key=GROQ_API_KEY)
except Exception as e:
return {"error": f"Failed to initialize Groq client: {str(e)}"}
system_prompt = """You are MediScan AI, a compassionate medical assistant. Analyze the lab report and provide response in this exact JSON format:
{
"extracted_values": [
{"test_name": "Test Name", "value": "value", "unit": "unit", "reference_range": "range", "status": "normal/high/low"}
],
"summary": "Brief 2-sentence summary in simple language",
"critical_alerts": ["Alert 1", "Alert 2"],
"simple_explanations": {"Test Name": "Simple explanation in everyday language"},
"questions_for_doctor": ["Question 1", "Question 2"],
"recommendations": ["Recommendation 1", "Recommendation 2"],
"disclaimer": "This is AI assistance, not medical advice"
}
Rules:
- Mark status as 'low', 'normal', or 'high' based on reference range
- If value is critically abnormal, add to critical_alerts
- Keep explanations at 6th grade reading level
- Be supportive and not alarming"""
try:
response = client.chat.completions.create(
model="llama-3.1-8b-instant",
messages=[
{"role": "system", "content": system_prompt},
{"role": "user", "content": f"Analyze this medical report in {language}: {report_text[:8000]}"}
],
temperature=0.2,
response_format={"type": "json_object"}
)
result = json.loads(response.choices[0].message.content)
return result
except json.JSONDecodeError:
# Fallback - try to extract JSON
content = response.choices[0].message.content
json_match = re.search(r'\{.*\}', content, re.DOTALL)
if json_match:
return json.loads(json_match.group())
return {"error": "Failed to parse AI response"}
except Exception as e:
return {"error": f"Analysis error: {str(e)}"}
def display_results(analysis_data):
"""Display analysis results in a beautiful format"""
if not analysis_data or "error" in analysis_data:
st.error(analysis_data.get("error", "Unable to analyze report"))
return
# Critical Alerts
if analysis_data.get('critical_alerts') and analysis_data['critical_alerts']:
st.markdown('<div class="alert-box">', unsafe_allow_html=True)
st.markdown("## π¨ CRITICAL ALERTS")
for alert in analysis_data['critical_alerts']:
st.markdown(f"β οΈ {alert}")
st.markdown('</div>', unsafe_allow_html=True)
# Summary
if analysis_data.get('summary'):
st.markdown('<div class="info-box">', unsafe_allow_html=True)
st.markdown("## π Summary")
st.write(analysis_data['summary'])
st.markdown('</div>', unsafe_allow_html=True)
# Test Results Table
if analysis_data.get('extracted_values'):
st.markdown("## π Test Results")
for test in analysis_data['extracted_values']:
status_emoji = {
"normal": "β
",
"high": "π΄",
"low": "π΅"
}.get(test.get('status', 'normal'), "βͺ")
st.markdown(f"""
**{status_emoji} {test.get('test_name', 'Unknown')}**
- Your value: `{test.get('value', '?')} {test.get('unit', '')}`
- Normal range: `{test.get('reference_range', 'N/A')}`
- Status: **{test.get('status', 'unknown').upper()}**
""")
st.markdown("---")
# Simple Explanations
if analysis_data.get('simple_explanations'):
st.markdown("## π‘ What This Means")
for test_name, explanation in analysis_data['simple_explanations'].items():
with st.expander(f"π {test_name}"):
st.write(explanation)
# Recommendations
if analysis_data.get('recommendations'):
st.markdown("## β
Recommendations")
for rec in analysis_data['recommendations']:
st.markdown(f"β’ {rec}")
# Questions for Doctor
if analysis_data.get('questions_for_doctor'):
st.markdown("## π£οΈ Questions to Ask Your Doctor")
for q in analysis_data['questions_for_doctor']:
st.markdown(f"β’ {q}")
# Disclaimer
st.markdown("---")
st.caption(analysis_data.get('disclaimer', "β οΈ This is AI assistance. Always consult a healthcare provider."))
# Main App
def main():
st.markdown('<p class="main-header">π©Ί MediScan AI</p>', unsafe_allow_html=True)
st.markdown('<p class="sub-header">Upload your medical report β Get simple, understandable insights in plain language</p>', unsafe_allow_html=True)
# Sidebar
with st.sidebar:
st.image("https://img.icons8.com/color/96/medical-report.png", width=80)
st.markdown("## About")
st.info("""
**MediScan AI** helps you understand medical reports by:
- Extracting values from PDFs or images
- Flagging abnormal results
- Explaining in simple language
- Suggesting questions for your doctor
""")
st.markdown("## Language")
language = st.radio("Select Language", ["English", "Roman Urdu"], index=0)
if not GROQ_API_KEY:
st.error("β οΈ GROQ_API_KEY not found!")
st.markdown("Please add your API key in Hugging Face Spaces Secrets:")
st.code("Settings β Repository Secrets β New Secret\nName: GROQ_API_KEY\nValue: your_groq_api_key")
st.markdown("## How to Use")
st.markdown("""
1. Upload your lab report (PDF or photo)
2. Click 'Analyze Report'
3. Review the simplified results
""")
# File Upload
uploaded_file = st.file_uploader(
"π Upload your medical report",
type=["pdf", "png", "jpg", "jpeg"],
help="Supports PDF files and images of lab reports"
)
if uploaded_file:
# Preview
if uploaded_file.type == "application/pdf":
st.success(f"β
PDF loaded: {uploaded_file.name}")
# Show PDF preview
try:
base64_pdf = base64.b64encode(uploaded_file.getvalue()).decode('utf-8')
pdf_display = f'<iframe src="data:application/pdf;base64,{base64_pdf}" width="100%" height="400" type="application/pdf"></iframe>'
st.markdown(pdf_display, unsafe_allow_html=True)
except Exception as e:
st.warning(f"Preview not available: {str(e)}")
else:
st.image(uploaded_file, caption="Uploaded Report", use_container_width=True)
# Analyze button
if st.button("π Analyze Report", type="primary"):
with st.spinner("π Extracting text from report..."):
if uploaded_file.type == "application/pdf":
report_text = extract_text_from_pdf(uploaded_file)
else:
report_text = extract_text_from_image(uploaded_file)
if report_text:
with st.spinner("π§ AI is analyzing your medical data..."):
analysis = analyze_medical_report(report_text, "urdu" if language == "Roman Urdu" else "english")
if analysis and "error" not in analysis:
st.session_state['analysis'] = analysis
st.success("β
Analysis complete!")
else:
st.error(analysis.get("error", "Failed to analyze report"))
else:
st.error("Could not extract text. Please ensure the report is clear and readable.")
# Display results
if 'analysis' in st.session_state:
st.markdown("---")
display_results(st.session_state['analysis'])
if __name__ == "__main__":
main() |