Update app.py
Browse files
app.py
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@@ -3,7 +3,6 @@ import requests
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import pandas as pd
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import plotly.express as px
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import qrcode
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from io import BytesIO
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# ================================================================
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# Helper Function: Species Summary + Map + QR Code
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@@ -14,7 +13,7 @@ def process_species_data(species_name, habitat, water_disturbance, land_disturba
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return "Please enter a species name.", None, None
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# ======================
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# 1. Fetch Wikipedia Summary
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# ======================
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wiki_url = "https://en.wikipedia.org/w/api.php"
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params = {
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@@ -25,24 +24,28 @@ def process_species_data(species_name, habitat, water_disturbance, land_disturba
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"explaintext": True
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}
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words = extract.split()
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if len(words) < 200:
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"This species plays a crucial ecological role, influencing biodiversity, habitat structure, "
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"and environmental balance. Its presence often reflects the health of local ecosystems
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* 3
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)
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summary = " ".join(words[:350]) # around
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# Add environmental interpretation
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summary += f"""
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@@ -60,38 +63,40 @@ Higher disturbance values indicate increased pressure on this species' survival
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# 2. Fetch GBIF Occurrence Data (Map API)
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# ======================
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gbif_url = f"https://api.gbif.org/v1/occurrence/search?scientificName={species_name}&limit=200"
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results = gbif_res.get("results", [])
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coords = []
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if coords:
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df = pd.DataFrame(coords)
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fig = px.scatter_mapbox(df, lat="lat", lon="lon", zoom=1, height=400)
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fig.update_layout(mapbox_style="open-street-map")
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else:
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# ======================
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# 3. QR Code Generator
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# ======================
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qr_data = f"BioVigilus Report\nSpecies: {species_name}\nHabitat: {habitat}\nSummary: {summary[:
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qr_img = BytesIO()
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qr = qrcode.make(qr_data)
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qr.save(qr_img)
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qr_img.seek(0)
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return summary, fig, qr_img
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# ================================================================
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# Custom CSS
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# ================================================================
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css = """
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@@ -108,34 +113,35 @@ h1 {
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padding: 20px;
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border-radius: 15px;
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box-shadow: 0 4px 15px rgba(0,0,0,0.1);
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}
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"""
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# ================================================================
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# Gradio UI (
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# ================================================================
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gr.Markdown("<h1 style='text-align:center;'>🌿 BioVigilus — Biodiversity Impact Analyzer</h1>")
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gr.Markdown("<p style='text-align:center; font-size:18px;'>Analyze species, habitats, and environmental stress factors with real-time data.</p>")
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with gr.Row():
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with gr.Column(elem_classes="custom-box"):
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species_name = gr.Textbox(label="Species Name", placeholder="e.g., Panthera tigris")
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habitat = gr.Textbox(label="Habitat Type", placeholder="Forest / Grassland / Wetland")
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water = gr.Slider(0, 100, label="Water Disturbance Level")
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land = gr.Slider(0, 100, label="Land Disturbance Level")
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noise = gr.Slider(0, 100, label="Noise Level")
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analyze_btn = gr.Button("Analyze", variant="primary")
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with gr.Column(elem_classes="custom-box"):
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summary_output = gr.Textbox(label="Species Summary", lines=
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map_output = gr.Plot(label="Distribution Map")
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qr_output = gr.Image(label="QR
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analyze_btn.click(
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process_species_data,
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@@ -143,4 +149,5 @@ with gr.Blocks() as demo:
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outputs=[summary_output, map_output, qr_output]
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)
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import pandas as pd
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import plotly.express as px
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import qrcode
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# ================================================================
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# Helper Function: Species Summary + Map + QR Code
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return "Please enter a species name.", None, None
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# ======================
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# 1. Fetch Wikipedia Summary
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# ======================
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wiki_url = "https://en.wikipedia.org/w/api.php"
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params = {
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"explaintext": True
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}
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try:
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response = requests.get(wiki_url, params=params).json()
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pages = response.get("query", {}).get("pages", {})
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# Handle cases where page is not found
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if "-1" in pages:
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extract = "Species not found in Wikipedia database."
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else:
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page = next(iter(pages.values()))
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extract = page.get("extract", "No summary available for this species.")
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except Exception as e:
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extract = "Error fetching data from Wikipedia."
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# Word count check
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words = extract.split()
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if len(words) < 200:
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filler = (
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" This species plays a crucial ecological role, influencing biodiversity, habitat structure, "
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"and environmental balance. Its presence often reflects the health of local ecosystems. "
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) * 3
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extract += "\n\n" + filler
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summary = " ".join(words[:350]) # Cap around 350 words
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# Add environmental interpretation
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summary += f"""
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# 2. Fetch GBIF Occurrence Data (Map API)
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# ======================
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gbif_url = f"https://api.gbif.org/v1/occurrence/search?scientificName={species_name}&limit=200"
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coords = []
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try:
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gbif_res = requests.get(gbif_url).json()
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results = gbif_res.get("results", [])
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for r in results:
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lat = r.get("decimalLatitude")
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lon = r.get("decimalLongitude")
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if lat and lon:
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coords.append({"lat": lat, "lon": lon})
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except Exception:
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pass # Fail silently for map if API errors
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if coords:
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df = pd.DataFrame(coords)
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fig = px.scatter_mapbox(df, lat="lat", lon="lon", zoom=1, height=400)
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fig.update_layout(mapbox_style="open-street-map", margin={"r":0,"t":0,"l":0,"b":0})
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else:
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# Return an empty map figure if no coordinates found
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fig = px.scatter_mapbox(pd.DataFrame({"lat":[], "lon":[]}), lat="lat", lon="lon", zoom=1)
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fig.update_layout(mapbox_style="open-street-map")
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# ======================
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# 3. QR Code Generator
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# ======================
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qr_data = f"BioVigilus Report\nSpecies: {species_name}\nHabitat: {habitat}\nSummary: {summary[:100]}..."
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# Generate QR and return PIL Image directly (Best for Gradio)
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qr_img = qrcode.make(qr_data)
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return summary, fig, qr_img
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# ================================================================
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# Custom CSS
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# ================================================================
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css = """
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padding: 20px;
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border-radius: 15px;
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box-shadow: 0 4px 15px rgba(0,0,0,0.1);
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border: 1px solid #e0e0e0;
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}
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"""
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# ================================================================
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# Gradio UI (Fixed)
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# ================================================================
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# FIX: Pass 'css' directly to the Blocks constructor
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with gr.Blocks(css=css, theme=gr.themes.Soft()) as demo:
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gr.Markdown("<h1 style='text-align:center;'>🌿 BioVigilus — Biodiversity Impact Analyzer</h1>")
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gr.Markdown("<p style='text-align:center; font-size:18px; color:#555;'>Analyze species, habitats, and environmental stress factors with real-time data.</p>")
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with gr.Row():
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with gr.Column(elem_classes="custom-box"):
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species_name = gr.Textbox(label="Species Name", placeholder="e.g., Panthera tigris")
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habitat = gr.Textbox(label="Habitat Type", placeholder="Forest / Grassland / Wetland")
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water = gr.Slider(0, 100, label="Water Disturbance Level", value=20)
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land = gr.Slider(0, 100, label="Land Disturbance Level", value=20)
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noise = gr.Slider(0, 100, label="Noise Level", value=20)
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analyze_btn = gr.Button("Analyze Impact", variant="primary")
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with gr.Column(elem_classes="custom-box"):
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summary_output = gr.Textbox(label="Species Summary", lines=12, interactive=False)
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map_output = gr.Plot(label="Global Distribution Map")
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qr_output = gr.Image(label="Download Report QR", type="pil")
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analyze_btn.click(
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process_species_data,
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outputs=[summary_output, map_output, qr_output]
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)
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if __name__ == "__main__":
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demo.launch()
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