aj1mlyd1n commited on
Commit
474c94a
Β·
verified Β·
1 Parent(s): 931d6f4

Update README.md

Browse files
Files changed (1) hide show
  1. README.md +25 -2
README.md CHANGED
@@ -21,9 +21,32 @@ Welcome to **ZemResearch**! We are an open-source research initiative passionate
21
  * **πŸ€– Lightweight AI Models:** We focus on fine-tuning accessible, efficient LLMs that can run smoothly without needing massive GPU clusters.
22
  * **🌍 Open Science:** Everything we build is dedicated to the global open-source community. Let's democratize AI drug discovery together!
23
 
24
- ### πŸš€ Our Flagship Project
25
- * **[HippoCrates](https://huggingface.co/datasets/ZemResearch/HippoCrates):** A massive, heavily sterilized dataset containing 1.46 million molecular structures. It's ready-to-use (in Apache Parquet format) for text-generation and chemical bioactivity fine-tuning.
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
26
  * **[HippoXic](https://huggingface.co/datasets/ZemResearch/HippoXic):** A premium, domain-specific instruction-tuning dataset containing 10,630 highly curated rows focused on chemical toxicology, FDA clinical safety, and real-world side effects. It bridges the gap between molecular structures and clinical bio-safety reasoning.
 
27
  * **[HippoLv](https://huggingface.co/datasets/ZemResearch/HippoLv):** A hyper-sterilized, feather-light dataset containing 9,465 RDKit-verified rows focused on drug behavior inside the human body (ADMET properties & aqueous solubility). It serves as the ultimate fuel for turning general LLMs into clinical pharmaceutical experts.
28
 
29
  ### 🀝 Let's Collaborate
 
21
  * **πŸ€– Lightweight AI Models:** We focus on fine-tuning accessible, efficient LLMs that can run smoothly without needing massive GPU clusters.
22
  * **🌍 Open Science:** Everything we build is dedicated to the global open-source community. Let's democratize AI drug discovery together!
23
 
24
+ ### πŸ¦› The Hippo Ecosystem
25
+ Our datasets are designed to work together, covering the full drug discovery pipeline β€” from raw molecular structure all the way to clinical safety. Each one is independently useful, but together they form a complete picture:
26
+
27
+ **HippoCrates β†’ HippoSynth β†’ HippoTarget β†’ HippoLv β†’ HippoXic**
28
+ *(what it is β†’ how it's made β†’ what it binds to β†’ how it behaves in the body β†’ whether it's safe)*
29
+
30
+ | Dataset | Focus | Size |
31
+ |---|---|---|
32
+ | 🧬 [HippoCrates](https://huggingface.co/datasets/ZemResearch/HippoCrates-1.4M-SMILES-Clean) | Molecular structures & SMILES | 1.46M rows |
33
+ | βš—οΈ [HippoSynth](https://huggingface.co/datasets/ZemResearch/HippoSynth) | Chemical reactions & synthesis | 50K rows |
34
+ | 🎯 [HippoTarget](https://huggingface.co/datasets/ZemResearch/HippoTarget) | Drug-target interaction | 15.5K rows |
35
+ | πŸ«€ [HippoLv](https://huggingface.co/datasets/ZemResearch/HippoLv) | ADMET & drug behavior in the body | 9.4K rows |
36
+ | ☠️ [HippoXic](https://huggingface.co/datasets/ZemResearch/HippoXic) | Toxicology & clinical safety | 10.6K rows |
37
+
38
+ Every dataset in the ecosystem follows the same curation standard: RDKit-validated, deduplicated, formatted for instruction-tuning (Alpaca style), and compressed with Snappy for a tiny footprint.
39
+
40
+ ### πŸš€ Dataset Details
41
+
42
+ * **[HippoCrates](https://huggingface.co/datasets/ZemResearch/HippoCrates-1.4M-SMILES-Clean):** A massive, heavily sterilized dataset containing 1.46 million molecular structures. It's ready-to-use (in Apache Parquet format) for text-generation and chemical bioactivity fine-tuning.
43
+
44
+ * **[HippoSynth](https://huggingface.co/datasets/ZemResearch/HippoSynth):** A curated dataset of 50,000 chemical synthesis and reaction examples β€” covering forward synthesis, retrosynthesis, and lab procedure interpretation. Built from USPTO patent reactions, the Open Reaction Database, and curated chemistry Q&A sources.
45
+
46
+ * **[HippoTarget](https://huggingface.co/datasets/ZemResearch/HippoTarget):** A drug-target interaction dataset with 15,520 rows, combining real experimental binding data with FDA-approved drug-target pairs. Teaches models which molecules bind to which proteins.
47
+
48
  * **[HippoXic](https://huggingface.co/datasets/ZemResearch/HippoXic):** A premium, domain-specific instruction-tuning dataset containing 10,630 highly curated rows focused on chemical toxicology, FDA clinical safety, and real-world side effects. It bridges the gap between molecular structures and clinical bio-safety reasoning.
49
+
50
  * **[HippoLv](https://huggingface.co/datasets/ZemResearch/HippoLv):** A hyper-sterilized, feather-light dataset containing 9,465 RDKit-verified rows focused on drug behavior inside the human body (ADMET properties & aqueous solubility). It serves as the ultimate fuel for turning general LLMs into clinical pharmaceutical experts.
51
 
52
  ### 🀝 Let's Collaborate