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1ddeb51 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 | """Anonymized approval/feedback store + nearest-neighbour learning loop.
When a clinician clicks "Approve & Log", we record what the AI recommended and
what the clinician actually chose. Disagreements (the clinician overriding the
AI's #1, or picking a code outside the Top-3) are the strongest learning signal
β they teach the system the clinic's "peculiar" coding preferences.
How the learning works (no model retraining needed):
* Every approval is embedded (the anonymized case summary) and stored in an
OpenSearch k-NN index `ohip_feedback`.
* On a new case, we k-NN the current case vector against past approvals and
build a per-code PRIOR, weighted by similarity and up-weighted when the code
was a clinician override. These priors are surfaced to the LLM and used to
re-rank retrieval, so future recommendations drift toward what clinicians
actually pick for similar cases.
PHIPA: stored summaries are de-identified before persistence and keyed by an
anonymous case id (hash). De-id has two layers:
1. Structured regex scrubbing (health-card numbers, calendar dates/DOB, phone,
email, long digit runs, "Name:" fields) β always on.
2. NER scrubbing via a local spaCy model (PERSON -> [NAME], locations ->
[LOCATION]) when spaCy + the model are installed; degrades gracefully to
regex-only otherwise. Runs fully offline (no external calls).
Relative ages/durations ("18 months old") are deliberately preserved because
they carry clinical signal for the learning loop and are not identifiers.
"""
from __future__ import annotations
import datetime as dt
import hashlib
import logging
import re
from opensearchpy import helpers
from .config import settings
from .embeddings import embed_text
from .opensearch_client import get_client
logger = logging.getLogger(__name__)
FEEDBACK_INDEX = "ohip_feedback"
# --- PHIPA scrubbing -------------------------------------------------------
# Layer 1: structured identifiers via regex.
_HEALTH_CARD = re.compile(r"\b\d{4}[-\s]?\d{3}[-\s]?\d{3}[-\s]?[A-Z]{0,2}\b")
_EMAIL = re.compile(r"\b[\w.+-]+@[\w-]+\.[\w.-]+\b")
_PHONE = re.compile(r"\b(?:\+?1[-.\s]?)?\(?\d{3}\)?[-.\s]\d{3}[-.\s]\d{4}\b")
# Calendar dates / DOB: ISO (2024-11-22), slashed (11/22/2024), or written
# ("November 22, 2024" / "Nov 22 2024"). Relative ages ("18 months") are NOT
# matched here β they are clinical signal, not identifiers.
_ISO_DATE = re.compile(r"\b\d{4}[-/]\d{1,2}[-/]\d{1,2}\b")
_SLASH_DATE = re.compile(r"\b\d{1,2}[-/]\d{1,2}[-/]\d{2,4}\b")
_WRITTEN_DATE = re.compile(
r"(?i)\b(?:jan|feb|mar|apr|may|jun|jul|aug|sep|oct|nov|dec)[a-z]*\.?\s+\d{1,2}(?:st|nd|rd|th)?,?\s*\d{0,4}\b"
)
_LONG_DIGITS = re.compile(r"\b\d{6,}\b")
_NAME_FIELD = re.compile(
r"(?i)\b(?:name|patient|pt|dob|mrn)\s*[:=]\s*[A-Z0-9][\w'β\-]*(?:\s+[A-Z0-9][\w'β\-]*)*"
)
# Layer 2: NER β labels we redact and their placeholders. DATE/TIME are handled
# by the date regexes above so we don't nuke ages like "18 months".
_NER_LABELS = {
"PERSON": "[NAME]",
"GPE": "[LOCATION]",
"LOC": "[LOCATION]",
"FAC": "[LOCATION]",
"ORG": "[ORG]",
}
# Lazy singleton for the spaCy pipeline: None = untried, False = unavailable.
_NLP: object | None | bool = None
def _get_nlp():
"""Load the spaCy NER pipeline once; return None if unavailable."""
global _NLP
if _NLP is not None:
return _NLP or None
if not settings.deid_ner:
_NLP = False
return None
try:
import spacy
# Only NER is needed; drop the rest for speed.
_NLP = spacy.load(
settings.deid_model,
disable=["parser", "lemmatizer", "tagger", "attribute_ruler"],
)
logger.info("De-id NER model '%s' loaded", settings.deid_model)
except Exception as exc: # noqa: BLE001
logger.warning(
"De-id NER unavailable (%s); falling back to regex-only scrubbing", exc
)
_NLP = False
return _NLP or None
def _regex_scrub(summary: str) -> str:
s = _HEALTH_CARD.sub("[ID]", summary)
s = _EMAIL.sub("[EMAIL]", s)
s = _PHONE.sub("[PHONE]", s)
s = _ISO_DATE.sub("[DATE]", s)
s = _SLASH_DATE.sub("[DATE]", s)
s = _WRITTEN_DATE.sub("[DATE]", s)
s = _LONG_DIGITS.sub("[NUM]", s)
s = _NAME_FIELD.sub(lambda m: m.group(0).split(":")[0].split("=")[0] + ": [REDACTED]", s)
return s
def _ner_scrub(summary: str) -> str:
nlp = _get_nlp()
if nlp is None:
return summary
doc = nlp(summary)
# Replace from the end so earlier offsets stay valid.
out = summary
for ent in sorted(doc.ents, key=lambda e: e.start_char, reverse=True):
placeholder = _NER_LABELS.get(ent.label_)
if placeholder:
out = out[: ent.start_char] + placeholder + out[ent.end_char :]
return out
def anonymize(summary: str) -> str:
"""De-identify a clinical summary (regex + NER) before persistence."""
s = _regex_scrub(summary)
s = _ner_scrub(s)
return s.strip()
def case_id(anon_summary: str) -> str:
seed = anon_summary + dt.datetime.utcnow().isoformat()
return hashlib.sha256(seed.encode()).hexdigest()[:16]
def feedback_mapping() -> dict:
return {
"settings": {
"index.knn": True,
"number_of_shards": 1,
"number_of_replicas": 0,
},
"mappings": {
"properties": {
"case_id": {"type": "keyword"},
"anon_summary": {"type": "text"},
"encounter_type": {"type": "keyword"},
"province_code": {"type": "keyword"},
"provider_specialty_code": {"type": "keyword"},
"ai_top_codes": {"type": "keyword"},
"ai_rank1": {"type": "keyword"},
"approved_codes": {"type": "keyword"},
"override_codes": {"type": "keyword"},
"agreed": {"type": "boolean"},
"note": {"type": "text"},
"selected_claim_cad": {"type": "float"},
"optimized_claim_cad": {"type": "float"},
"difference_cad": {"type": "float"},
"risk_level": {"type": "keyword"},
"optimized_codes": {"type": "keyword"},
"created_at": {"type": "date"},
"case_vector": {
"type": "knn_vector",
"dimension": settings.embedding_dim,
"method": {
"name": "hnsw",
"space_type": "cosinesimil",
"engine": "lucene",
},
},
}
},
}
def ensure_feedback_index(client=None) -> None:
client = client or get_client()
if client.indices.exists(index=FEEDBACK_INDEX):
# Recreate when embedding dim changes (e.g. local gte-768 β remote 1024).
try:
mapping = client.indices.get_mapping(index=FEEDBACK_INDEX)
props = (
mapping.get(FEEDBACK_INDEX, {})
.get("mappings", {})
.get("properties", {})
)
existing_dim = (
props.get("case_vector", {}) or {}
).get("dimension")
if existing_dim is not None and int(existing_dim) != int(
settings.embedding_dim
):
logger.warning(
"Feedback index dim %s != configured %s β recreating '%s'",
existing_dim,
settings.embedding_dim,
FEEDBACK_INDEX,
)
client.indices.delete(index=FEEDBACK_INDEX)
except Exception as exc: # noqa: BLE001
logger.warning("Could not inspect feedback index mapping: %s", exc)
if not client.indices.exists(index=FEEDBACK_INDEX):
client.indices.create(index=FEEDBACK_INDEX, body=feedback_mapping())
logger.info("Created feedback index '%s'", FEEDBACK_INDEX)
def log_approval(
*,
clinical_summary: str,
encounter_type: str | None,
ai_top_codes: list[str],
approved_codes: list[str],
note: str | None = None,
case_vector: list[float] | None = None,
selected_claim_cad: float | None = None,
optimized_claim_cad: float | None = None,
difference_cad: float | None = None,
risk_level: str | None = None,
optimized_codes: list[str] | None = None,
provider_specialty_code: str | None = None,
province_code: str | None = None,
) -> dict:
"""Persist one approval event; returns the recorded (anonymized) doc summary."""
client = get_client()
ensure_feedback_index(client)
anon = anonymize(clinical_summary)
cid = case_id(anon)
ai_rank1 = ai_top_codes[0] if ai_top_codes else None
# A disagreement = clinician did not (only) accept the AI's #1 pick.
override_codes = [c for c in approved_codes if c not in (ai_top_codes[:1] or [])]
agreed = bool(approved_codes) and approved_codes[0] == ai_rank1
vector = case_vector or embed_text(anon)
doc = {
"case_id": cid,
"anon_summary": anon,
"encounter_type": encounter_type,
"province_code": province_code or settings.default_province_code,
"provider_specialty_code": provider_specialty_code
or settings.default_specialty_code,
"ai_top_codes": ai_top_codes,
"ai_rank1": ai_rank1,
"approved_codes": approved_codes,
"override_codes": override_codes,
"agreed": agreed,
"note": note,
"selected_claim_cad": selected_claim_cad,
"optimized_claim_cad": optimized_claim_cad,
"difference_cad": difference_cad,
"risk_level": risk_level,
"optimized_codes": optimized_codes or [],
"created_at": dt.datetime.utcnow().strftime("%Y-%m-%dT%H:%M:%S"),
"case_vector": vector,
}
client.index(index=FEEDBACK_INDEX, id=cid, body=doc, refresh=True)
logger.info(
"Logged approval %s (agreed=%s, overrides=%s)", cid, agreed, override_codes
)
return {"case_id": cid, "agreed": agreed, "override_codes": override_codes}
def learned_priors(case_vector: list[float], k: int | None = None) -> dict[str, float]:
"""Return {code: prior_score} learned from similar past approvals.
Similar past cases contribute their approved codes, weighted by vector
similarity; clinician OVERRIDES are up-weighted so corrections dominate.
Returns {} when no feedback has been collected yet.
"""
k = k or settings.feedback_neighbours
client = get_client()
if not client.indices.exists(index=FEEDBACK_INDEX):
return {}
try:
resp = client.search(
index=FEEDBACK_INDEX,
body={
"size": k,
"_source": ["approved_codes", "override_codes"],
"query": {"knn": {"case_vector": {"vector": case_vector, "k": k}}},
},
)
except Exception as exc: # noqa: BLE001
logger.warning("Feedback lookup failed: %s", exc)
return {}
priors: dict[str, float] = {}
for hit in resp["hits"]["hits"]:
sim = float(hit.get("_score", 0.0)) # ~similarity for cosine/lucene
src = hit["_source"]
overrides = set(src.get("override_codes") or [])
for code in src.get("approved_codes") or []:
weight = sim * (settings.feedback_override_boost if code in overrides else 1.0)
priors[code] = priors.get(code, 0.0) + weight
return priors
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