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DrVai-Rag-Testing / myenv /lib /python3.10 /site-packages /Bio /Entrez /DTDs /JATS-archivecustom-models1-3.ent
| <!-- ============================================================= --> | |
| <!-- MODULE: Journal Archiving DTD Customize Content and --> | |
| <!-- Attributes Module --> | |
| <!-- VERSION: ANSI/NISO JATS Version 1.3 (Z39.96-2021) --> | |
| <!-- DATE: June 2021 --> | |
| <!-- --> | |
| <!-- ============================================================= --> | |
| <!-- ============================================================= --> | |
| <!-- PUBLIC DOCUMENT TYPE DEFINITION --> | |
| <!-- TYPICAL INVOCATION --> | |
| <!-- | |
| "-//NLM//DTD JATS (Z39.96) Journal Archiving DTD Customize Content and Attributes Module v1.3 20210610//EN" | |
| Delivered as file "JATS-archivecustom-models1-3.ent" --> | |
| <!-- ============================================================= --> | |
| <!-- ============================================================= --> | |
| <!-- SYSTEM: Journal Archiving and Interchange DTD of the --> | |
| <!-- JATS DTD Suite --> | |
| <!-- --> | |
| <!-- PURPOSE: To declare the Parameter Entities (PEs) used to --> | |
| <!-- over-ride the content models, parts of content --> | |
| <!-- models, or attribute lists of the JATS DTD Suite --> | |
| <!-- --> | |
| <!-- Or-groups within models should use mixes or --> | |
| <!-- classes rather than name elements directly. --> | |
| <!-- --> | |
| <!-- Note: Since PEs must be declared before they --> | |
| <!-- are used, this module must be called before the --> | |
| <!-- content modules that declare elements. --> | |
| <!-- --> | |
| <!-- TAG SET SPONSOR --> | |
| <!-- National Center for Biotechnology --> | |
| <!-- Information (NCBI) --> | |
| <!-- National Library of Medicine (NLM) --> | |
| <!-- --> | |
| <!-- CREATED FOR: --> | |
| <!-- This DTD was created from the JATS DTD Suite. --> | |
| <!-- Digital archives and publishers may use the --> | |
| <!-- DTD as is for markup of journal literature or --> | |
| <!-- related material for archiving and transferring --> | |
| <!-- such material between archives or create a --> | |
| <!-- custom XML DTD from the Suite for --> | |
| <!-- these purposes. --> | |
| <!-- --> | |
| <!-- This DTD is in the public domain. An organization --> | |
| <!-- that wishes to create its own DTD from the suite --> | |
| <!-- may do so without permission from NLM. --> | |
| <!-- --> | |
| <!-- The suite has been set up to be extended using a --> | |
| <!-- new DTD file and a new DTD-specific customization --> | |
| <!-- module to redefine the many Parameter Entities. --> | |
| <!-- Do not modify the suite directly or redistribute --> | |
| <!-- modified versions of the suite. --> | |
| <!-- --> | |
| <!-- In the interest of maintaining consistency and --> | |
| <!-- clarity for potential users, NLM requests: --> | |
| <!-- --> | |
| <!-- 1. If you create a DTD from the JATS DTD Suite --> | |
| <!-- and intend to stay compatible with the suite, --> | |
| <!-- then please include the following statement --> | |
| <!-- as a comment in all of your DTD modules: --> | |
| <!-- "Created from, and fully compatible with, --> | |
| <!-- the ANSI/NISO Z39.96 Journal Article Tag --> | |
| <!-- Suite (JATS)." --> | |
| <!-- --> | |
| <!-- 2. If you alter one or more modules of the suite, --> | |
| <!-- then please rename your version and all its --> | |
| <!-- modules to avoid any confusion with the --> | |
| <!-- original suite. Also, please include the --> | |
| <!-- following statement as a comment in all your --> | |
| <!-- DTD modules: --> | |
| <!-- "Based in part on, but not fully compatible --> | |
| <!-- with, the ANSI/NISO Z39.96 Journal Article --> | |
| <!-- Tag Suite (JATS)." --> | |
| <!-- --> | |
| <!-- ORIGINAL CREATION DATE: --> | |
| <!-- August 2004 --> | |
| <!-- --> | |
| <!-- CREATED BY: Mulberry Technologies, Inc. for the NISO Z39.96 --> | |
| <!-- Working Group. Mulberry Technologies was --> | |
| <!-- supported by National Center for Biotechnology --> | |
| <!-- Information (NCBI), a center of the US National --> | |
| <!-- Library of Medicine (NLM). --> | |
| <!-- --> | |
| <!-- The Journal Archiving and Interchange DTD is --> | |
| <!-- built from the JATS DTD Suite. --> | |
| <!-- --> | |
| <!-- This DTD and the Suite are a continuation of --> | |
| <!-- the work done by NCBI, Mulberry Technologies, --> | |
| <!-- and Inera Inc. on the NLM Journal Archiving --> | |
| <!-- and Interchange DTD Suite, which was originally --> | |
| <!-- released in December, 2002. --> | |
| <!-- --> | |
| <!-- NLM thanks the Harvard University Libraries, both --> | |
| <!-- for proposing that a draft archiving NLM DTD for --> | |
| <!-- life sciences journals be extended to accommodate --> | |
| <!-- journals in all disciplines and for sponsoring --> | |
| <!-- Inera Inc.'s collaboration with other DTD --> | |
| <!-- authors in completing NLM Version 1.0. The --> | |
| <!-- Andrew W. Mellon Foundation provided support for --> | |
| <!-- these important contributions. --> | |
| <!-- --> | |
| <!-- Suggestions for refinements and enhancements to --> | |
| <!-- this DTD should be sent in email to: --> | |
| <!-- jats@ncbi.nlm.nih.gov --> | |
| <!-- ============================================================= --> | |
| <!-- ============================================================= --> | |
| <!-- DTD VERSION/CHANGE HISTORY --> | |
| <!-- ============================================================= --> | |
| <!-- | |
| Version Reason/Occasion (who) vx.x (yyyy-mm-dd) | |
| ============================================================== | |
| JATS Version 1.3 (ANSI/NISO Z39.96-2021) | |
| (DAL/BTU) v1.3 (2021-06-10) | |
| ANSI NISO JATS is a continuing maintenance NISO Standard, | |
| which requires voting by both the NISO and ANSI memberships | |
| to be changed. This version of the NISO JATS was approved | |
| by ANSI vote on June 10, 2021, so it supersedes all Committee | |
| Drafts as well as the draft version JATS 1.3 2021 (the version | |
| submitted for vote), becoming NISO JATS v1.3 20210610 | |
| (ANSI/NISO Z39.96-2019). | |
| The file names and formal public identifiers have been | |
| changed in the modules and the catalogs. | |
| 53. JATS 'v1.3d2 20201130' becomes 'v1.3 20210610' | |
| (final ANSI vote date) | |
| 'ANSI/NISO Z39.96-2019' becomes 'ANSI/NISO Z39.96-2021' | |
| ============================================================== | |
| JATS Version 1.3d2 (ANSI/NISO Z39.96-2021) | |
| (DAL/BTU) v1.3d2 (2020-11-30) | |
| ANSI NISO JATS is a continuing maintenance NISO Standard, | |
| which requires voting by the NISO and ANSI memberships | |
| to be changed. | |
| This draft DTD represents an interim version of the | |
| non-normative JATS DTD Suite, as an indication to JATS users | |
| of the decisions that have been made by the JATS Standing | |
| Committee. This draft has not yet been given public review | |
| or voting; it is for Standing Committee review and | |
| testing. The formal public identifiers have been changed | |
| in the modules and the catalogs. | |
| 52. EXPANSION OF FIXED ATTRIBUTES LIST: There are four | |
| content-defined attributes which are CDATA values | |
| (undetermined) in Archiving, but which are named value | |
| lists in Publishing/Authoring: | |
| - @fn-type | |
| - @person-group-type (override is in this module) | |
| - @pub-id-type | |
| - @ref-type | |
| In order to give users of Publishing and Authoing | |
| more flexibility to name new values without | |
| destroying the benefit of named value lists: | |
| - A new value “custom” has been added to the named | |
| value list of each of these four attributes. | |
| - A new attribute @custom-type has been added to | |
| each element that takes one of these attributes. | |
| The new attribute @custom-type was also added to | |
| Green, so that documents valid to Blue or Pumpkin | |
| would also be also valid to Green. | |
| In this module: | |
| - The element <article-id> was given the new attribute | |
| @custom-type. The value "custom" will be | |
| documented as a valid article-id type. | |
| - The element <ref> was given the new attribute | |
| @custom-type. The value "custom" will be | |
| documented as a valid reference type. | |
| - The element <pub-id> was given the new attribute | |
| @custom-type. The value "custom" will be | |
| documented as a valid publication ID type. | |
| The Best Practice rule (unenforceable in DTDs, but | |
| enforceable in Schematron) is, that if you use the | |
| value “custom” from one of these lists, you should | |
| also record what type of 'custom' in the | |
| @custom-type attribute. | |
| 51. OBJECT ID Added <object-id> to: | |
| <disp-formula>, <list>, <ref-list> | |
| 50. SEE ALSO - The four vocabulary attributes were added to | |
| <see-also>, which is defined in the BITS question-answer | |
| model. | |
| 49. STRING DATE - Used to be added to models using | |
| %citation-additions.class, now added through | |
| %references.class; and the same as Blue. Changed: | |
| <element-citation>, <mixed-citation> | |
| <product>, <related-article>, <related-object> | |
| 48. ADDED <issue-title-group> added to <article-meta> | |
| (optional, repeatable) | |
| 47. DISPLAY FORMULA - Held our noses and added <caption> to | |
| <display-formula>. | |
| 46. JATS "v1.3d2 20201130" becomes 'v1.3 20210610' (second | |
| committee draft following the final ANSI/NISO 1.2 vote) | |
| ============================================================== | |
| JATS Version 1.3d1 (ANSI/NISO Z39.96-2021) | |
| (DAL/BTU) v1.3.d1 (2019-08-31) | |
| ANSI NISO JATS is a continuing maintenance NISO Standard, | |
| which requires voting by the NISO and ANSI memberships | |
| to be changed. | |
| This draft DTD represents an interim version of the | |
| non-normative JATS DTD Suite, as an indication to JATS users | |
| of the decisions that have been made by the JATS Standing | |
| Committee. This draft has not yet been given public review | |
| or voting. The formal public identifiers were changed in the | |
| modules and the catalogs. | |
| 45. SIZE - All face markup (by face-markup.class) was added to the | |
| content model of <size>. | |
| 44. JATS "1.2" becomes "v1.3d1 20190831" (first committee | |
| draft following the final ANSI/NISO vote) | |
| ============================================================== | |
| JATS Version 1.2 (ANSI/NISO Z39.96-2021) | |
| (DAL/BTU) v1.2 (2019-02-08) | |
| NISO JATS is a continuing maintenance NISO Standard, which | |
| requires voting by the both the NISO and ANSI membership | |
| to be changed. This version of the NISO JATS was approved | |
| by ANSI vote on Feb 08, 2019, so it supersedes all Committee | |
| Drafts as well as the draft version JATS 1.2 2018 (the version | |
| submitted for vote), becoming NISO JATS v1.2 20190208 | |
| (ANSI/NISO Z39.96-2021). | |
| 43. JATS "1.2" becomes "v1.2 20190208" (final ANSI vote date) | |
| "ANSI/NISO Z39.96-2015" becomes "ANSI/NISO Z39.96-2019" | |
| ============================================================== | |
| JATS Version 1.2 (ANSI/NISO Z39.96-2018) | |
| (DAL/BTU) v1.2 (2018-11-30) | |
| NISO JATS is a continuing maintenance NISO Standard, which | |
| requires voting by the both the NISO and ANSI membership | |
| to be changed. This version of the NISO JATS was approved | |
| by ANSI and NISO vote, so it supersedes all Committee Drafts | |
| and becoming NISO JATS 1.2 (ANSI/NISO Z39.96-2018). | |
| 42. JATS "1.2d2" and "v1.2d2 20180401" became | |
| JATS "1.2" and "v1.2 20181130" | |
| ============================================================= | |
| JATS Version 1.2d2 (DAL/BTU) v1.2d2 (2018-04-01) | |
| JATS is a continuing maintenance NISO Standard, which | |
| requires voting by the ANSI and NISO memberships to be changed. | |
| BITS is under continuous maintenance, and is modified at the | |
| discretion of the working group. | |
| This draft DTD represents an interim version of the | |
| non-normative JATS DTD Suite, as an indication to JATS users | |
| the decisions that have been made by the JATS Standing | |
| Committee. This draft has not yet been given public review | |
| or voting. The formal public identifiers were changed in the | |
| modules and the catalogs. | |
| 41. ASSIGNING AUTHORITY - Added @assigning-authority to the | |
| following elements, so that the type-of-identifier and | |
| the party-responsible-for-identifier could both be | |
| recorded. Previously, these values were both assigned to | |
| the attribute @pub-id-type. | |
| - <article-id> | |
| - Note: <pub-id> already had @assigning-authority | |
| 40. NON-MONETARY SUPPORT - Inside <article-meta> added new | |
| <support-group> to hold both funding and | |
| non-monetary support descriptions. <support-group> is | |
| both a peer to <funding-group> (backward compatibility) | |
| and contains <funding-group>. | |
| 39. PUBLICATION DATE-NOT-AVAILABLE - Inside <article-meta>, | |
| <front-stub>, <event>, and <event-desc> | |
| added new element <pub-date-not-available>, as an | |
| alternative to <pub-date>. The meaning is that a | |
| publication date was (for whatever reason) not available. | |
| Presence of the element says nothing about publication | |
| status. | |
| 38. DATE IN CITATION - Superscript and subscript added to | |
| <date-in-citation>. | |
| 37. CONFERENCE DATE - Face markup (face-markup.class) | |
| added to <conf-date>. | |
| 36. BITS "2.0" and "v2.0 20151225" remains unchanged | |
| JATS "1.2d1" and "v1.2d1 20171231" became | |
| JATS "1.2d2" and "v1.2d2 20180401". | |
| No module names were changed. | |
| ============================================================= | |
| JATS Version 1.2d1 (ANSI/NISO Z39.96-2015) | |
| (DAL/BTU) v1.2d1 (2017-12-31) | |
| NISO JATS is a continuing maintenance NISO Standard, which | |
| requires voting by the ANSI and NISO memberships to be changed. | |
| This draft DTD represents an interim version of the | |
| non-normative JATS DTD Suite, as an indication to JATS users | |
| the decisions that have been made by the JATS Standing | |
| Committee. This draft has not yet been given public review | |
| or voting. The formal public identifiers were changed in the | |
| modules and the catalogs. | |
| 35. JATS "1.2d1" and "v1.2d1 20170631" became | |
| JATS "1.2d1" and "v1.2d1 20171231". | |
| ============================================================= | |
| JATS Version 1.2d1 (DAL/BTU) v1.2d1 (2017-06-31) | |
| NISO JATS is a continuing maintenance NISO Standard, which | |
| requires voting by the ANSI and NISO memberships to be changed. | |
| This draft DTD represents an interim version of the | |
| non-normative JATS DTD Suite, as an indication to JATS users | |
| the decisions that have been made by the JATS Standing | |
| Committee. This draft has not yet been given public review | |
| or voting. The formal public identifiers were changed in the | |
| 34. X - both <inline-graphic> and <private-char> added to | |
| elements allowed in <x>. | |
| 33. INLINE FORMULA - Added accessibility elements <alt-text> and | |
| <long-desc> to the model of inline formula, by adding the | |
| access.class PE. | |
| 32. ARTICLE META MODEL | |
| - ARTICLE VERSION - Added new element <article-version> | |
| inside <article-metadata> to hold one version number for | |
| the article. <article-version> element may repeat inside | |
| <article-version-alternatives> to hold version numbers | |
| from different systems. | |
| - NO DATE - <pub-date> (optional repeatable) is now | |
| followed by the optional new element | |
| <pub-date-not-available>. | |
| - PUBLICATION HISTORY - Added new element based on BITS, | |
| <pub-history>, to hold <event>s as <history> holds | |
| <date>s. New internal elements: <event>, <event-desc> | |
| 31. JATS became version "1.2d1" and "v1.2d1 20170631" | |
| ============================================================= | |
| JATS Version 1.1 (DAL/BTU) v1.1 (2015-12-15) | |
| JATS is a continuing maintenance NISO Standard, which | |
| requires voting by the ANSI and NISO memberships to be changed. | |
| JATS 1.1 was approved in late 2015, so the formal public | |
| identifiers were changed in the modules and the catalogs. | |
| No model or attribute changes were made at this time. | |
| 30. JATS became version "1.1" and "v1.1 20151215" | |
| BITS remained version "2.0" but becomes "v2.0 20151225" | |
| ============================================================= | |
| JATS Version 1.1d3 (DAL/BTU) v1.1d3 (2015-03-01) | |
| The changes in this release are in response to NISO | |
| License and Indicators Recommended Practice. | |
| NISO JATS is a continuing maintenance NISO Standard, which | |
| requires voting by the NISO membership to be changed. This | |
| Committee Draft 1.1d3 will be sent to the NISO voting | |
| membership, to become (if approved) NISO JATS 1.1. | |
| This draft DTD represents an interim version of the | |
| non-normative JATS DTD Suite, as an indication to JATS users | |
| the decisions that have been made by the JATS Standing | |
| Committee. | |
| 29. JATS became version "1.1d3" and "v1.1d3 20150301" | |
| ============================================================= | |
| JATS Version 1.1d2 (DAL/BTU) v1.1d2 (2014-09-30) | |
| NISO JATS is a continuing maintenance NISO Standard, which | |
| requires voting by the NISO membership to be changed. This | |
| Committee Draft 1.1d2 will be sent to the NISO voting | |
| membership, to become (if approved) NISO JATS 1.1. | |
| This catalog represents an interim version of the | |
| non-normative JATS DTD Suite, as an indication to JATS users | |
| the decisions that have been made by the JATS Standing | |
| Committee. | |
| 28. RUBY MODEL CHANGED TO MATCH HTML5 | |
| - changed the Ruby content model to allow only a single | |
| Ruby annotation on a single Ruby base: | |
| (rb, (rt | (rp, rt, rp)) ) | |
| The Ruby textual annotation may take a pair of | |
| Ruby parentheses, but these are optional. | |
| 27. ATTRIBUTES FOR PUB-ID | |
| - Added the linking attributes (optional version) to <pub-id> , | |
| so that a <pub-id> that is a DOI, for example, can carry the | |
| linking attributes and be made into a live link. In this use | |
| of <pub-id>, the element is acting both as an identifier | |
| and as a link. | |
| - Added new attribute @assigning-authority to <pub-id>, to | |
| carry new values such as "CrossRef" and to take some of the | |
| semantic burden off the '@pub-id-type' attribute, when | |
| values are organizations such as "Genbank" or "PDB". | |
| 26. <OBJECT-ID> INSIDE <TRANS-ABSTRACT> | |
| Allowed <object-id> at the beginning of <trans-abstract>, | |
| so that abstracts could be given DOIs. | |
| 25. <VOLUME> INSIDE <ARTICLE-META> | |
| - Allowed <volume> to repeat inside <article-meta>, the types to | |
| be distinguished using @content-type | |
| - Added new optional element <volume-issue-group> inside | |
| <article-meta) following all volume and issue elements | |
| to hold volume-issue pairs (or n-tuples) when a second | |
| and subsequent <volume> has its own related issue | |
| numbers. | |
| 24. JATS became version "1.1d2" and "v1.1d2 20140930//EN" | |
| ============================================================= | |
| NISO JATS Version 1.1d1 (DAL/BTU) v1.1 (2013-11-15) | |
| ANSI/NISO Z39.96-2012 (pre-release for V1.0 BITS; Version 1.1d1) | |
| NISO JATS Standing Committee met and answered the requests and | |
| suggestions from the NISO request forms. | |
| Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs, | |
| XSDs, RNGs and supporting documentation are available at | |
| http://jats.nlm.nih.gov/1.3d2/ | |
| 23. NEW <era> ELEMENT | |
| Added <era> through date-parts.class to: | |
| - <conf-date> | |
| - <date-in-citation> | |
| - <pub-date> | |
| - <string-date> | |
| - access-date (deprecated | |
| - time-stamp (deprecated) | |
| 22. INSTITUTIONS TO STANDARDS ORGANIZATIONS | |
| Added the elements <institution-wrap> to the following elements | |
| through the institution-wrap.class: | |
| - <copyright-holder> | |
| - <std-organization> | |
| 21. RUBY ANNOTATIONS - Overrode the default JATS inclusions, to | |
| change the more restricted face-markup class to the | |
| Archive-specific all Phrase. Elements change: | |
| - <rb> Ruby Base (through %rb-elements;) | |
| 20. GLOBAL ATTRIBUTES - Added the new parameter entity | |
| %jats-common-atts; | |
| to every element in this module. This PE adds (for now) the | |
| @id attribute and the @xml:base attribute to every element, | |
| whether metadata or narrative. | |
| Since the @id in this parameter entity is optional, a second | |
| parameter entity jats-common-atts-id-required was also added. | |
| The two are kept in sync with the jats-base-atts parameter | |
| entity. | |
| 19. ABSTRACTS AND KEYWORDS ON NEW STRUCTURES | |
| - Added <abstract> (through %abstract.class;) and <kwd-group> | |
| (through %kwd-group.class;) to the following elements: | |
| - disp-formula (through %disp-formula-elements;) | |
| - Changed "abstract*" to "(%abstract.class;)*" | |
| and "kwd-group*" to "(%kwd-group.class;)*" since those | |
| classes now exist. Elements should have a limited number of | |
| ways to be invoked. | |
| - article-meta (through %article-meta-model;) | |
| ============================================================= | |
| NISO JATS Version 1.0 (DAL/BTU) v1.0 (2012-xx-xx) | |
| ANSI/NISO Z39.96-2012 (Version 1.0) | |
| Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs, | |
| XSDs, RNGs and supporting documentation are available at | |
| http://jats.nlm.nih.gov/1.3d2/ | |
| 18. RELATED OBJECT - Added <related-object> everywhere | |
| <related-article> was used, including inside | |
| <article-meta> using article-meta-model. | |
| 17. CONTRIBUTOR MODEL - Added "contrib-id.class" to the | |
| <contrib> model, to hold identifiers for people, | |
| such as publishers-specific IDs, and ORCIDs. | |
| 16. VERSE-LINE ELEMENTS - Added the PE %verse-line-elements to | |
| this module because the default expanded, and Archiving did | |
| not need to expand as it already was expanded. | |
| 14. DATE ATTRIBUTES - Added attributes to <date> through @date-atts: | |
| a) @iso-8601-date - ISO 8601 standard date format | |
| of the publication date. Format YYYY-MM-DDThh:mm:ss | |
| b) @calendar - Name of the calendar used (@calendar) in | |
| naming this publication date (such as "Gregorian", | |
| "Japanese" (Emperor years), or "Islamic"). | |
| c) Added @publication-format, so that both publication | |
| dates and history dates can separate the format of the | |
| publication from the version/lifecycle event. Thus | |
| both an "article" and a "manuscript" might be received. | |
| 13. STANDARDS ORGANIZATION - Added std-organization-elements | |
| to increase what was allowed in the names of standards bodies. | |
| 12. XREF REF TYPES - #9 below says "XREF ATTRIBUTES - Removed | |
| the %xref-atts PE from this module since the regular version | |
| (in xlink3.ent(?)) was equally inclusive. But it is NOT. | |
| Brought back %xref-atts; | |
| 11. ISSN-L ELEMENTS - Added <x> TO <issn-l> via | |
| %issn-l-elements; | |
| ============================================================= | |
| Version 0.4 (DAL/BTU) v0.4 (2011-01-31) | |
| This Tag Set is in the process of becoming a NISO standard. | |
| The version numbers are starting over from 0.4", as a Trial | |
| Use Draft, to be made into "Version 1.0" when the Tag Suite | |
| becomes a NISO standard. Thus, the version number that would | |
| have been "NLM Version 3.1 Draft" has become NISO JATS | |
| "Version 0.4". | |
| Details on NISO Trial Use Draft Version 0.4 are available at | |
| http://jats.nlm.nih.gov/JATS-0.4. | |
| 10. Updated the DTD-version attribute to "0.4" | |
| 9. Updated the public identifier to "v0.4 20110131", | |
| modified the formal public identifier to include "JATS (Z39.96)", | |
| and the filename as delivered to include "JATS" and the | |
| new version number "0". | |
| http://jats.nlm.nih.gov/0.4. | |
| 7. XREF ATTRIBUTES - Removed the %xref-atts PE from this module | |
| since the regular version (in xlink3.ent(?)) was equally | |
| inclusive. See #12 above. | |
| 6. ISSUE - Allowed to repeat inside <article-meta> | |
| 5. AFFILIATION ALTERNATIVES - Added the element <aff-alternatives> | |
| to <article-meta> through %article meta-model;. This element | |
| will hold multiple <aff>s that are a representation of a | |
| single affiliation, for example, the name of an institution | |
| in two languages or two scripts. | |
| 4. PERSON-GROUP - Became a mixed-content model, so the parameter | |
| entity %person-group-model: was changed to | |
| %person-group-elements;, which will be mixed with #PCDATA | |
| as defined in references.ent. The PE person-group-model has | |
| been retained in references.ent for compatibility, but has been | |
| set to the mixed model using person-group-elements. | |
| 3. @SPECIFIC-USE and @XML:LANG - Added the @specific-use and | |
| @xml:lang to %display-atts;. Also added these attributes | |
| to the following over-rides: | |
| - article-id through article-id-atts (@specific-user only) | |
| - award-id through award-id-atts (both) | |
| - date through date-atts (@specific-use only) | |
| - funding-statement through funding-statement-atts (both) | |
| - pub-id through pub-id-atts (@specific-use only) | |
| - trans-title through pub-id-atts (@specific-use only; | |
| @xml:lang already) | |
| - xref through xref-atts (both) | |
| 2. STRING-DATE - Added <string-date> back to the following | |
| elements using %citation-additions.class;. It was accidentally | |
| deleted during the 3.0 revision of -references.class: | |
| - product (%product-elements;) | |
| - related-article (%related-article-elements;) | |
| - related-object (%related-object-elements;) | |
| - funding-statement through funding-statement-atts (both) | |
| ============================================================= | |
| Version 3.0 (DAL/BTU) v3.0 (2007-10-31) | |
| Version 3.0 is the first non-backward-compatible release. | |
| In addition to the usual incremental changes, some | |
| elements and attributes have been renamed and/or remodeled | |
| to better meet user needs and to increase tag set consistency. | |
| All module change histories are available through the Tag Suite | |
| web site at http://dtd.nlm.nih.gov. | |
| Details on version 3.0 are available at | |
| http://dtd.nlm.nih.gov/3.0. | |
| 1. Updated public identifier to "v3.0 20071031//EN" --> | |
| <!-- ============================================================= --> | |
| <!-- Details concerning | |
| ANSI/NISO Z39.96-2015 JATS-based DTDs, XSDs, | |
| RNGs and supporting documentation are available at | |
| http://jats.nlm.nih.gov/1.1/ --> | |
| <!-- ============================================================= --> | |
| <!-- INLINE MIXES TO OVER-RIDE CONTENT MODELS --> | |
| <!-- (ELEMENTS TO BE ADDED TO #PCDATA IN MODELS)--> | |
| <!-- ============================================================= --> | |
| <!-- ABBREVIATION ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <abbrev> element --> | |
| <!-- ACCESS DATE ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the Access Date <access-date> element --> | |
| <!-- AFFILIATION ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <aff> element --> | |
| <!-- ANONYMOUS ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| an <anonymous> element --> | |
| <!-- ARTICLE TITLE ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <article-title> element. --> | |
| <!-- CHEMICAL STRUCTURE ELEMENTS --> | |
| <!-- Those elements that may mix with the data | |
| characters inside a Chemical Structure | |
| <chem-struct> --> | |
| <!-- CITATION ELEMENTS --> | |
| <!-- Content for both types of citation. These | |
| elements may be mixed with #PCDATA in the | |
| <mixed-citation> element (in which all | |
| punctuation and spacing are left intact), and | |
| they also constitute the choices that can be | |
| used to form the all-element-content of the | |
| <element-citation> element (in which | |
| punctuation and spacing are removed). | |
| Design Note: All inline mixes begin with an | |
| OR bar. --> | |
| <!-- COLLABORATIVE (GROUP) AUTHOR ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <collab> element. This is essentially | |
| %all-phrase; plus contrib-info and break. | |
| All-phase is not used because of | |
| duplication clashes with the | |
| -contrib-info.class; --> | |
| <!-- COMPOUND KEYWORD PART ELEMENTS --> | |
| <!-- Elements to be mixed with data characters | |
| inside the <compound-kwd-part> element --> | |
| <!-- CONFERENCE DATE ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <conf-date> element --> | |
| <!-- COMMENT ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the Comment in a Citation <comment> element. | |
| Design Note: All inline mixes begin with an | |
| OR bar, but since %simple-phrase; is an | |
| inline mix, the OR bar is already there. --> | |
| <!-- COPYRIGHT HOLDER ELEMENTS --> | |
| <!-- Elements to be mixed with data characters | |
| inside the content model for the | |
| <copyright-holder> element. --> | |
| <!-- COPYRIGHT STATEMENT ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <copyright-statement> --> | |
| <!-- CORRESPONDENCE INFORMATION ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the correspondence information. --> | |
| <!-- COUNTRY ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the country element. --> | |
| <!-- DATE IN CITATION ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the Date Inside Citation <date-in-citation> | |
| element --> | |
| <!-- FORMULA, DISPLAY ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <disp-formula> --> | |
| <!-- EMAIL ADDRESS ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <email> element --> | |
| <!-- ET AL ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| an <etal> element --> | |
| <!-- EXTERNAL LINK ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| an <ext-link> --> | |
| <!-- FUNDING STATEMENT ELEMENTS --> | |
| <!-- Model for the <funding-statement> element --> | |
| <!-- HISTORY ELEMENTS --> | |
| <!-- Elements that may be mixed with data | |
| characters inside the model for <history> | |
| when <history> is modeled as a mixed content | |
| element. --> | |
| <!-- FORMULA, INLINE ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <inline-formula> element. --> | |
| <!-- INLINE SUPPLEMENTARY MATERIAL ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <inline-supplementary-material> element--> | |
| <!-- INSTITUTION NAME ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <institution> element --> | |
| <!-- ISBN ELEMENTS --> | |
| <!-- Elements for use with data characters inside | |
| the model for the <isbn> element --> | |
| <!-- ISSN ELEMENTS --> | |
| <!-- Elements for use with data characters inside | |
| the model for the <issn> element --> | |
| <!-- ISSN-L ELEMENTS --> | |
| <!-- Elements for use with data characters inside | |
| the model for the <issn-l> element --> | |
| <!-- ISSUE TITLE ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <issue-title> element --> | |
| <!-- KEYWORD CONTENT ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| a keyword. --> | |
| <!-- LABEL ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <label> element --> | |
| <!-- LINK ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| linking element such as <xref>, <target>, | |
| and <ext-link> --> | |
| <!-- LONG DESCRIPTION ELEMENTS --> | |
| <!-- Elements to be mixed with data characters | |
| inside the <long-desc> element --> | |
| <!-- METADATA DATA NAME ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <meta-name> element --> | |
| <!-- METADATA DATA VALUE ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <meta-value> element --> | |
| <!-- NAMED CONTENT ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <named-content> element --> | |
| <!-- PARAGRAPH ELEMENTS --> | |
| <!-- Elements that may be used within a paragraph | |
| in a mixed content model with #PCDATA. | |
| Design Note: There is a major overlap between | |
| this parameter entity and the mix for elements | |
| that are at the same level as a paragraph. | |
| Inline elements appear only inside a | |
| paragraph, but block elements such as quotes | |
| and lists may appear either within a | |
| paragraph or at the same level as a | |
| paragraph. This serves a requirement in a | |
| repository DTD, since some incoming material | |
| will have restricted such elements to only | |
| inside a paragraph, some incoming material | |
| will have restricted them to only outside a | |
| paragraph and some may allow them in both | |
| places. Thus the DTD must allow for them to | |
| be in either or both. --> | |
| <!-- PERSON GROUP ELEMENTS --> | |
| <!-- Elements to be mixed with #PCDATA characters | |
| within the Person Group element | |
| (name class include <string-name> in this | |
| tag set.--> | |
| <!-- PREFORMATTED TEXT ELEMENTS --> | |
| <!-- Elements that may be used, along with data | |
| characters, inside the content model for the | |
| <preformat> element, in which whitespace, | |
| such as tabs, line feeds, and spaces will | |
| be preserved. --> | |
| <!-- PRODUCT ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <product> element | |
| (Note: all-phrase was replicated and not | |
| used directly because the article-link.class | |
| elements are repeated in -references.class | |
| and therefore cause duplication. --> | |
| <!-- PUBLISHER'S LOCATION ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <publisher-loc> element --> | |
| <!-- RELATED ARTICLE ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <related-article> element. | |
| (Note: all-phrase was replicated and not | |
| used directly because the article-link.class | |
| elements are repeated in -references.class | |
| and therefore cause duplication.) --> | |
| <!-- RELATED OBJECT ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <related-object> element. | |
| (Note: all-phrase was replicated and not | |
| used directly because the article-link.class | |
| elements are repeated in -references.class | |
| and therefore cause duplication.) --> | |
| <!-- ROLE ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| a <role> | |
| Design Note: All inline mixes begin with an | |
| OR bar; since %rendition-plus; is an | |
| inline mix, the OR bar is already there. --> | |
| <!-- SELF-URI ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <self-uri> element --> | |
| <!-- SIGNATURE BLOCK ELEMENTS --> | |
| <!-- Elements to be mixed with data characters | |
| inside the content model for the | |
| <sig-block> element. --> | |
| <!-- SIGNATURE ELEMENTS --> | |
| <!-- Elements to be mixed with data characters | |
| inside the content model for the | |
| <sig> element. --> | |
| <!-- SIZE ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the size element. --> | |
| <!-- SOURCE ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <source> element --> | |
| <!-- SPEAKER ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| a speaker. --> | |
| <!-- STANDARDS ORGANIZATION ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| <std-organization>. --> | |
| <!-- STRING DATE ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <string-date> element --> | |
| <!-- STRING NAME ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <string-name> element --> | |
| <!-- STRUCTURAL TITLE ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <title> element --> | |
| <!-- STYLED CONTENT ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| the <styled-content> element --> | |
| <!-- SUBJECT GROUPING NAME ELEMENTS --> | |
| <!-- Elements that may be used, along with data | |
| characters inside the content model of the | |
| <subject> element --> | |
| <!-- DEFINITION LIST: TERM ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| a <term>. --> | |
| <!-- TEXTUAL FORM ELEMENTS --> | |
| <!-- Model for the <textual-form> element. | |
| Added <label> --> | |
| <!-- TIME STAMP ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| a <time-stamp>. --> | |
| <!-- TITLE ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| title elements such as <title>, <subtitle>, | |
| <trans-title>, etc. --> | |
| <!-- VERSE-LINE ELEMENTS --> | |
| <!-- The elements that can be included along with | |
| data characters inside the content model of | |
| a <verse-line> | |
| Design Note: All inline mixes begin with an | |
| OR bar, but since %simple-text; is an inline | |
| mix, the OR bar is already there. --> | |
| <!-- X ELEMENTS --> | |
| <!-- Elements for use inside the <x> element --> | |
| <!-- ============================================================= --> | |
| <!-- RUBY MARKUP --> | |
| <!-- ============================================================= --> | |
| <!-- RUBY BASE ELEMENTS --> | |
| <!-- Those elements that may mix with the data | |
| characters inside a Ruby Base <rb> | |
| element. --> | |
| <!-- ============================================================= --> | |
| <!-- DUPLICATES NEEDED FOR OVER-RIDES --> | |
| <!-- (models unchanged from common.ent but --> | |
| <!-- needed below) --> | |
| <!-- ============================================================= --> | |
| <!-- COMMON ATTRIBUTES --> | |
| <!-- These lists of attributes will be added to | |
| nearly every element, in both the document | |
| metadata and the document body, of the entire | |
| Tag Set: | |
| - including table elements for both the | |
| XHTML-inspired and OASIS-inspired | |
| table model elements | |
| - excluding only <mml:math> and | |
| <xi:include> (whose namespaces JATS | |
| does not control). | |
| Great care should be taken to use these | |
| attributes judiciously, not as a shortcut to | |
| thinking through where an attribute should be | |
| used. Potential use cases include adding | |
| @xml:lang or some RDFa attribute to every | |
| elements. --> | |
| <!-- JATS BASE ATTRIBUTES --> | |
| <!-- Holds all the common attributes except @id. | |
| Used to keep the two common attribute lists | |
| in sync. To add a global attribute, modify | |
| this list. --> | |
| <!-- JATS COMMON ATTRIBUTES --> | |
| <!-- Holds all the common attributes, as defined in | |
| the base attribute parameter entity, plus an | |
| optional @id. --> | |
| <!-- JATS COMMON ATTRIBUTES (ID REQUIRED) --> | |
| <!-- Holds all the common attributes, as defined in | |
| the base attribute parameter entity, plus a | |
| required @id. --> | |
| <!-- MIGHT LINK XLINK ATTRIBUTES --> | |
| <!-- Used for elements which may need to link to | |
| external sources or other objects within | |
| the document, but may not necessarily act | |
| as a link at all. The attribute | |
| "xlink:href" identifies the object to which | |
| the link points. --> | |
| <!-- ============================================================= --> | |
| <!-- SECTION OPTIONAL TITLE MODEL --> | |
| <!-- ============================================================= --> | |
| <!-- CONTENT MODEL FOR AN UNTITLED SECTION --> | |
| <!-- The model for a section-like structure that | |
| may or may not have an initial title --> | |
| <!-- ============================================================= --> | |
| <!-- OVER-RIDES OF CONTENT MODELS (FULL MODELS) --> | |
| <!-- ============================================================= --> | |
| <!-- ARTICLE METADATA MODEL --> | |
| <!-- Content model for the metadata that is | |
| specific to the article. --> | |
| <!-- ADDRESS MODEL --> | |
| <!-- Content model for the <address> element --> | |
| <!-- APPENDIX MODEL --> | |
| <!-- Content model for the <app> element. The | |
| section model already contains parentheses. | |
| Made initial <title> optional. --> | |
| <!-- AUTHOR NOTES MODEL --> | |
| <!-- Content model for an <author-notes> element. | |
| --> | |
| <!-- CONFERENCE MODEL --> | |
| <!-- Content model for the <conference> element --> | |
| <!-- CONTRIBUTOR GROUP MODEL --> | |
| <!-- Content model for the <title-group> element--> | |
| <!-- CONTRIBUTOR MODEL --> | |
| <!-- Content model for the <contrib> element --> | |
| <!-- DEFINITION LIST: DEFINITION ITEM MODEL --> | |
| <!-- Content model of a <def-item> --> | |
| <!-- DEFINITION LIST MODEL --> | |
| <!-- Content model for the <def-list> element --> | |
| <!-- FOOTNOTE GROUP MODEL --> | |
| <!-- Content model for the <fn-group> element | |
| Added an <x> as alternative to <fn>. --> | |
| <!-- HISTORY MODEL --> | |
| <!-- Content model for the <history> element --> | |
| <!-- KEYWORD GROUP MODEL --> | |
| <!-- Content model for a <kwd-group> element --> | |
| <!-- LIST MODEL --> | |
| <!-- Content model for the <list> element --> | |
| <!-- PUBLICATION DATE MODEL --> | |
| <!-- Content model for the element <pub-date> --> | |
| <!-- REFERENCE ITEM MODEL --> | |
| <!-- Content model for the <ref> element --> | |
| <!-- REFERENCE LIST MODEL --> | |
| <!-- Content model for the <ref-list> element --> | |
| <!-- RUBY WRAPPER Model --> | |
| <!-- Content model for the <ruby> element --> | |
| <!-- CONTENT MODEL FOR A STRUCTURAL SECTION --> | |
| <!-- The model for a Section <sec> --> | |
| <!-- TABLE WRAP FOOTER MODEL --> | |
| <!-- Content model for the <table-wrap-foot> | |
| element --> | |
| <!-- TRANSLATED ABSTRACT MODEL --> | |
| <!-- Content model for an <trans-abstract> element. | |
| --> | |
| <!-- ============================================================= --> | |
| <!-- OVER-RIDES OF ATTRIBUTE LISTS --> | |
| <!-- ============================================================= --> | |
| <!-- ARTICLE IDENTIFIER ATTRIBUTES --> | |
| <!-- Attributes for the <article-id> element --> | |
| <!-- DATE (HISTORICAL) ATTRIBUTES --> | |
| <!-- FUNDING STATEMENT ATTRIBUTES --> | |
| <!-- Attributes for the <funding-source> element--> | |
| <!-- INDEX-TERM ATTRIBUTES (BITS override) --> | |
| <!-- Attribute list for <index-term> element. | |
| The attribute @index-type names the | |
| specific indexes in which this term should | |
| be used. Contains the name of an index or | |
| a space separated series of index names --> | |
| <!-- SEE-ALSO ATTRIBUTES --> | |
| <!-- Attribute list for <see-also> element. --> | |
| <!-- PUBLICATION IDENTIFIER ATTRIBUTES --> | |
| <!-- Attributes for the <pub-id> element --> | |
| <!-- X(CROSS) REFERENCE ATTRIBUTES --> | |
| <!-- Attribute list for cross references --> | |
| <!-- ================== End Archiving Content/ATT Over-rides ===== --> | |