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Add predictive ML workbench Space
Browse files- README.md +8 -6
- app.py +94 -0
- predictive_ml_workbench/__init__.py +3 -0
- predictive_ml_workbench/service.py +375 -0
- requirements.txt +5 -0
README.md
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---
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title: Predictive
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colorTo: gray
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sdk: gradio
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sdk_version: 6.10.0
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app_file: app.py
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pinned: false
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---
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-
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---
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title: Predictive ML Workbench
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colorFrom: green
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colorTo: blue
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sdk: gradio
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app_file: app.py
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pinned: false
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license: mit
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---
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# Predictive ML Workbench
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Advanced free CPU scikit-learn project for regression, classification, clustering,
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dimensionality reduction, preprocessing, model selection, and evaluation.
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app.py
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import gradio as gr
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from predictive_ml_workbench.service import PredictiveMLWorkbenchService
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service = PredictiveMLWorkbenchService()
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def run_workbench(file_obj, workflow, target_column, test_size, cv_folds, max_clusters):
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file_path = getattr(file_obj, "name", file_obj)
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return service.run(
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csv_path=file_path,
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workflow=workflow,
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target_column=target_column,
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test_size=float(test_size),
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cv_folds=int(cv_folds),
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max_clusters=int(max_clusters),
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)
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with gr.Blocks(
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title="Predictive ML Workbench",
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theme=gr.themes.Soft(primary_hue="green", secondary_hue="blue"),
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) as demo:
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gr.Markdown(
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"""
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# Predictive ML Workbench
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Upload a CSV dataset and run end-to-end machine learning workflows for regression,
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classification, clustering, dimensionality reduction, preprocessing, model selection,
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and evaluation.
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"""
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)
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with gr.Accordion("What this project covers", open=False):
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gr.Markdown(
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"""
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- Regression
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- Classification
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- Clustering
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- Dimensionality reduction
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- Preprocessing with numeric and categorical pipelines
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- Model selection with cross-validation
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- Evaluation with workflow-specific metrics and plots
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"""
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)
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dataset_input = gr.File(label="CSV Dataset", file_types=[".csv"])
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with gr.Row():
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workflow_input = gr.Dropdown(
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choices=["Classification", "Regression", "Clustering", "Dimensionality Reduction"],
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value="Classification",
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label="Workflow",
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)
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target_input = gr.Textbox(
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label="Target Column",
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placeholder="Required for regression/classification; optional otherwise",
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)
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with gr.Row():
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test_size_input = gr.Slider(0.1, 0.4, value=0.2, step=0.05, label="Test Split")
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cv_input = gr.Slider(2, 5, value=3, step=1, label="CV Folds")
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cluster_input = gr.Slider(3, 8, value=6, step=1, label="Max Clusters")
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run_button = gr.Button("Run Workflow", variant="primary")
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model_output = gr.Textbox(label="Selected Model / Method", lines=2)
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metrics_output = gr.Textbox(label="Metrics", lines=10)
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preview_output = gr.Textbox(label="Data Preview", lines=10)
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plot_output = gr.Plot(label="Visualization")
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status_output = gr.Textbox(label="Status", lines=3)
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run_button.click(
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fn=run_workbench,
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inputs=[
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dataset_input,
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workflow_input,
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target_input,
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test_size_input,
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cv_input,
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cluster_input,
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],
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outputs=[
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model_output,
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metrics_output,
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preview_output,
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plot_output,
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status_output,
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],
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)
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if __name__ == "__main__":
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demo.launch()
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predictive_ml_workbench/__init__.py
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from .service import PredictiveMLWorkbenchService
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__all__ = ["PredictiveMLWorkbenchService"]
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predictive_ml_workbench/service.py
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import os
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import matplotlib.pyplot as plt
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import numpy as np
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import pandas as pd
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from sklearn.base import clone
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from sklearn.cluster import AgglomerativeClustering, KMeans
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from sklearn.compose import ColumnTransformer
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from sklearn.decomposition import PCA
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from sklearn.ensemble import GradientBoostingClassifier, GradientBoostingRegressor, RandomForestClassifier, RandomForestRegressor
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from sklearn.impute import SimpleImputer
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from sklearn.linear_model import LogisticRegression, Ridge
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from sklearn.metrics import (
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accuracy_score,
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confusion_matrix,
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f1_score,
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mean_absolute_error,
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mean_squared_error,
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r2_score,
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silhouette_score,
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)
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from sklearn.model_selection import GridSearchCV, train_test_split
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from sklearn.pipeline import Pipeline
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from sklearn.preprocessing import OneHotEncoder, StandardScaler
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+
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os.environ.setdefault("LOKY_MAX_CPU_COUNT", "2")
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class PredictiveMLWorkbenchService:
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def run(self, csv_path, workflow, target_column, test_size, cv_folds, max_clusters):
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if not csv_path:
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return "", "", "", None, "Upload a CSV file first."
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| 34 |
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try:
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| 36 |
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df = pd.read_csv(csv_path)
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| 37 |
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except Exception as exc:
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| 38 |
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return "", "", "", None, f"Could not read CSV: {type(exc).__name__}: {exc}"
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| 39 |
+
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+
if df.empty:
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return "", "", "", None, "Dataset is empty."
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+
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try:
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if workflow == "Classification":
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return self._run_classification(df, target_column, test_size, cv_folds)
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if workflow == "Regression":
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return self._run_regression(df, target_column, test_size, cv_folds)
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if workflow == "Clustering":
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return self._run_clustering(df, target_column, max_clusters)
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return self._run_dimensionality_reduction(df, target_column)
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except Exception as exc:
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return "", "", "", None, f"Workflow failed: {type(exc).__name__}: {exc}"
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def _run_classification(self, df, target_column, test_size, cv_folds):
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x, y = self._supervised_split(df, target_column)
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| 56 |
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preprocessor = self._build_preprocessor(x)
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| 57 |
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candidates = [
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+
(
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"LogisticRegression",
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+
LogisticRegression(max_iter=600),
|
| 62 |
+
{"model__C": [0.5, 1.0, 2.0]},
|
| 63 |
+
),
|
| 64 |
+
(
|
| 65 |
+
"RandomForestClassifier",
|
| 66 |
+
RandomForestClassifier(random_state=42),
|
| 67 |
+
{"model__n_estimators": [120, 220], "model__max_depth": [None, 8]},
|
| 68 |
+
),
|
| 69 |
+
(
|
| 70 |
+
"GradientBoostingClassifier",
|
| 71 |
+
GradientBoostingClassifier(random_state=42),
|
| 72 |
+
{"model__n_estimators": [80, 140], "model__learning_rate": [0.05, 0.1]},
|
| 73 |
+
),
|
| 74 |
+
]
|
| 75 |
+
|
| 76 |
+
x_train, x_test, y_train, y_test = train_test_split(
|
| 77 |
+
x,
|
| 78 |
+
y,
|
| 79 |
+
test_size=test_size,
|
| 80 |
+
random_state=42,
|
| 81 |
+
stratify=y if y.nunique() > 1 else None,
|
| 82 |
+
)
|
| 83 |
+
|
| 84 |
+
best_name, best_search = self._select_model(
|
| 85 |
+
candidates=candidates,
|
| 86 |
+
preprocessor=preprocessor,
|
| 87 |
+
x_train=x_train,
|
| 88 |
+
y_train=y_train,
|
| 89 |
+
cv_folds=cv_folds,
|
| 90 |
+
scoring="f1_macro",
|
| 91 |
+
)
|
| 92 |
+
|
| 93 |
+
preds = best_search.best_estimator_.predict(x_test)
|
| 94 |
+
acc = accuracy_score(y_test, preds)
|
| 95 |
+
macro_f1 = f1_score(y_test, preds, average="macro")
|
| 96 |
+
metrics = "\n".join(
|
| 97 |
+
[
|
| 98 |
+
f"Accuracy: {acc:.4f}",
|
| 99 |
+
f"Macro F1: {macro_f1:.4f}",
|
| 100 |
+
f"CV Best Score: {best_search.best_score_:.4f}",
|
| 101 |
+
f"Train Rows: {len(x_train)}",
|
| 102 |
+
f"Test Rows: {len(x_test)}",
|
| 103 |
+
f"Classes: {y.nunique()}",
|
| 104 |
+
f"Best Params: {best_search.best_params_}",
|
| 105 |
+
]
|
| 106 |
+
)
|
| 107 |
+
|
| 108 |
+
fig = self._plot_confusion_matrix(y_test, preds)
|
| 109 |
+
preview = x.head(8).to_string(index=False)
|
| 110 |
+
status = "Completed end-to-end classification workflow with preprocessing, model selection, and evaluation."
|
| 111 |
+
return best_name, metrics, preview, fig, status
|
| 112 |
+
|
| 113 |
+
def _run_regression(self, df, target_column, test_size, cv_folds):
|
| 114 |
+
x, y = self._supervised_split(df, target_column)
|
| 115 |
+
if not pd.api.types.is_numeric_dtype(y):
|
| 116 |
+
raise ValueError("Regression target column must be numeric.")
|
| 117 |
+
|
| 118 |
+
preprocessor = self._build_preprocessor(x)
|
| 119 |
+
candidates = [
|
| 120 |
+
(
|
| 121 |
+
"Ridge",
|
| 122 |
+
Ridge(),
|
| 123 |
+
{"model__alpha": [0.5, 1.0, 2.0, 5.0]},
|
| 124 |
+
),
|
| 125 |
+
(
|
| 126 |
+
"RandomForestRegressor",
|
| 127 |
+
RandomForestRegressor(random_state=42),
|
| 128 |
+
{"model__n_estimators": [120, 220], "model__max_depth": [None, 8]},
|
| 129 |
+
),
|
| 130 |
+
(
|
| 131 |
+
"GradientBoostingRegressor",
|
| 132 |
+
GradientBoostingRegressor(random_state=42),
|
| 133 |
+
{"model__n_estimators": [80, 140], "model__learning_rate": [0.05, 0.1]},
|
| 134 |
+
),
|
| 135 |
+
]
|
| 136 |
+
|
| 137 |
+
x_train, x_test, y_train, y_test = train_test_split(
|
| 138 |
+
x,
|
| 139 |
+
y,
|
| 140 |
+
test_size=test_size,
|
| 141 |
+
random_state=42,
|
| 142 |
+
)
|
| 143 |
+
|
| 144 |
+
best_name, best_search = self._select_model(
|
| 145 |
+
candidates=candidates,
|
| 146 |
+
preprocessor=preprocessor,
|
| 147 |
+
x_train=x_train,
|
| 148 |
+
y_train=y_train,
|
| 149 |
+
cv_folds=cv_folds,
|
| 150 |
+
scoring="r2",
|
| 151 |
+
)
|
| 152 |
+
|
| 153 |
+
preds = best_search.best_estimator_.predict(x_test)
|
| 154 |
+
r2 = r2_score(y_test, preds)
|
| 155 |
+
mae = mean_absolute_error(y_test, preds)
|
| 156 |
+
rmse = float(np.sqrt(mean_squared_error(y_test, preds)))
|
| 157 |
+
metrics = "\n".join(
|
| 158 |
+
[
|
| 159 |
+
f"R2: {r2:.4f}",
|
| 160 |
+
f"MAE: {mae:.4f}",
|
| 161 |
+
f"RMSE: {rmse:.4f}",
|
| 162 |
+
f"CV Best Score: {best_search.best_score_:.4f}",
|
| 163 |
+
f"Train Rows: {len(x_train)}",
|
| 164 |
+
f"Test Rows: {len(x_test)}",
|
| 165 |
+
f"Best Params: {best_search.best_params_}",
|
| 166 |
+
]
|
| 167 |
+
)
|
| 168 |
+
|
| 169 |
+
fig = self._plot_regression_scatter(y_test, preds)
|
| 170 |
+
preview = x.head(8).to_string(index=False)
|
| 171 |
+
status = "Completed end-to-end regression workflow with preprocessing, model selection, and evaluation."
|
| 172 |
+
return best_name, metrics, preview, fig, status
|
| 173 |
+
|
| 174 |
+
def _run_clustering(self, df, target_column, max_clusters):
|
| 175 |
+
x = df.copy()
|
| 176 |
+
if target_column and target_column in x.columns:
|
| 177 |
+
x = x.drop(columns=[target_column])
|
| 178 |
+
|
| 179 |
+
preprocessor = self._build_preprocessor(x)
|
| 180 |
+
transformed = preprocessor.fit_transform(x)
|
| 181 |
+
transformed = np.asarray(transformed)
|
| 182 |
+
|
| 183 |
+
sample = transformed
|
| 184 |
+
if transformed.shape[0] > 1200:
|
| 185 |
+
sample = transformed[:1200]
|
| 186 |
+
|
| 187 |
+
best = None
|
| 188 |
+
best_labels = None
|
| 189 |
+
for n_clusters in range(2, max_clusters + 1):
|
| 190 |
+
for name, estimator in [
|
| 191 |
+
("KMeans", KMeans(n_clusters=n_clusters, random_state=42, n_init=10)),
|
| 192 |
+
("AgglomerativeClustering", AgglomerativeClustering(n_clusters=n_clusters)),
|
| 193 |
+
]:
|
| 194 |
+
labels = estimator.fit_predict(sample)
|
| 195 |
+
if len(np.unique(labels)) < 2:
|
| 196 |
+
continue
|
| 197 |
+
score = silhouette_score(sample, labels)
|
| 198 |
+
if best is None or score > best["score"]:
|
| 199 |
+
best = {"name": name, "clusters": n_clusters, "score": score}
|
| 200 |
+
best_labels = labels
|
| 201 |
+
|
| 202 |
+
if best is None:
|
| 203 |
+
raise ValueError("Could not produce a valid clustering result.")
|
| 204 |
+
|
| 205 |
+
reduced = PCA(n_components=2, random_state=42).fit_transform(sample)
|
| 206 |
+
metrics = "\n".join(
|
| 207 |
+
[
|
| 208 |
+
f"Algorithm: {best['name']}",
|
| 209 |
+
f"Clusters: {best['clusters']}",
|
| 210 |
+
f"Silhouette Score: {best['score']:.4f}",
|
| 211 |
+
f"Rows Used: {sample.shape[0]}",
|
| 212 |
+
f"Features After Preprocessing: {sample.shape[1]}",
|
| 213 |
+
]
|
| 214 |
+
)
|
| 215 |
+
fig = self._plot_cluster_scatter(reduced, best_labels, title=f"{best['name']} clustering")
|
| 216 |
+
preview = x.head(8).to_string(index=False)
|
| 217 |
+
status = "Completed clustering workflow with preprocessing, model selection across algorithms, and evaluation."
|
| 218 |
+
return best["name"], metrics, preview, fig, status
|
| 219 |
+
|
| 220 |
+
def _run_dimensionality_reduction(self, df, target_column):
|
| 221 |
+
x = df.copy()
|
| 222 |
+
labels = None
|
| 223 |
+
if target_column and target_column in x.columns:
|
| 224 |
+
labels = x[target_column].astype(str)
|
| 225 |
+
x = x.drop(columns=[target_column])
|
| 226 |
+
|
| 227 |
+
preprocessor = self._build_preprocessor(x)
|
| 228 |
+
transformed = preprocessor.fit_transform(x)
|
| 229 |
+
transformed = np.asarray(transformed)
|
| 230 |
+
|
| 231 |
+
n_components = 2 if transformed.shape[1] >= 2 else 1
|
| 232 |
+
pca = PCA(n_components=n_components, random_state=42)
|
| 233 |
+
reduced = pca.fit_transform(transformed)
|
| 234 |
+
|
| 235 |
+
explained = pca.explained_variance_ratio_
|
| 236 |
+
metrics = "\n".join(
|
| 237 |
+
[
|
| 238 |
+
f"Method: PCA",
|
| 239 |
+
f"Components: {n_components}",
|
| 240 |
+
f"Explained Variance: {', '.join(f'{v:.4f}' for v in explained)}",
|
| 241 |
+
f"Cumulative Variance: {explained.sum():.4f}",
|
| 242 |
+
f"Rows: {transformed.shape[0]}",
|
| 243 |
+
f"Features After Preprocessing: {transformed.shape[1]}",
|
| 244 |
+
]
|
| 245 |
+
)
|
| 246 |
+
|
| 247 |
+
fig = self._plot_pca_scatter(reduced, labels)
|
| 248 |
+
preview_df = pd.DataFrame(reduced, columns=[f"PC{i+1}" for i in range(n_components)])
|
| 249 |
+
preview = preview_df.head(8).to_string(index=False)
|
| 250 |
+
status = "Completed dimensionality reduction workflow with preprocessing and PCA evaluation."
|
| 251 |
+
return "PCA", metrics, preview, fig, status
|
| 252 |
+
|
| 253 |
+
def _build_preprocessor(self, x):
|
| 254 |
+
numeric_cols = x.select_dtypes(include=["number"]).columns.tolist()
|
| 255 |
+
categorical_cols = [col for col in x.columns if col not in numeric_cols]
|
| 256 |
+
|
| 257 |
+
numeric_pipeline = Pipeline(
|
| 258 |
+
steps=[
|
| 259 |
+
("imputer", SimpleImputer(strategy="median")),
|
| 260 |
+
("scaler", StandardScaler()),
|
| 261 |
+
]
|
| 262 |
+
)
|
| 263 |
+
|
| 264 |
+
categorical_pipeline = Pipeline(
|
| 265 |
+
steps=[
|
| 266 |
+
("imputer", SimpleImputer(strategy="most_frequent")),
|
| 267 |
+
("onehot", OneHotEncoder(handle_unknown="ignore", sparse_output=False)),
|
| 268 |
+
]
|
| 269 |
+
)
|
| 270 |
+
|
| 271 |
+
return ColumnTransformer(
|
| 272 |
+
transformers=[
|
| 273 |
+
("num", numeric_pipeline, numeric_cols),
|
| 274 |
+
("cat", categorical_pipeline, categorical_cols),
|
| 275 |
+
],
|
| 276 |
+
remainder="drop",
|
| 277 |
+
)
|
| 278 |
+
|
| 279 |
+
def _supervised_split(self, df, target_column):
|
| 280 |
+
if not target_column:
|
| 281 |
+
raise ValueError("Target column is required for supervised workflows.")
|
| 282 |
+
if target_column not in df.columns:
|
| 283 |
+
raise ValueError(f"Target column `{target_column}` was not found.")
|
| 284 |
+
|
| 285 |
+
x = df.drop(columns=[target_column])
|
| 286 |
+
y = df[target_column]
|
| 287 |
+
if x.shape[1] == 0:
|
| 288 |
+
raise ValueError("Dataset needs at least one feature column.")
|
| 289 |
+
return x, y
|
| 290 |
+
|
| 291 |
+
def _select_model(self, candidates, preprocessor, x_train, y_train, cv_folds, scoring):
|
| 292 |
+
best_name = None
|
| 293 |
+
best_search = None
|
| 294 |
+
|
| 295 |
+
for name, estimator, param_grid in candidates:
|
| 296 |
+
pipeline = Pipeline(
|
| 297 |
+
steps=[
|
| 298 |
+
("preprocessor", clone(preprocessor)),
|
| 299 |
+
("model", estimator),
|
| 300 |
+
]
|
| 301 |
+
)
|
| 302 |
+
search = GridSearchCV(
|
| 303 |
+
estimator=pipeline,
|
| 304 |
+
param_grid=param_grid,
|
| 305 |
+
cv=cv_folds,
|
| 306 |
+
scoring=scoring,
|
| 307 |
+
n_jobs=1,
|
| 308 |
+
)
|
| 309 |
+
search.fit(x_train, y_train)
|
| 310 |
+
if best_search is None or search.best_score_ > best_search.best_score_:
|
| 311 |
+
best_name = name
|
| 312 |
+
best_search = search
|
| 313 |
+
|
| 314 |
+
return best_name, best_search
|
| 315 |
+
|
| 316 |
+
def _plot_confusion_matrix(self, y_true, y_pred):
|
| 317 |
+
fig, ax = plt.subplots(figsize=(5.5, 4.5))
|
| 318 |
+
labels = np.unique(np.concatenate([np.asarray(y_true), np.asarray(y_pred)]))
|
| 319 |
+
matrix = confusion_matrix(y_true, y_pred, labels=labels)
|
| 320 |
+
im = ax.imshow(matrix, cmap="Blues")
|
| 321 |
+
ax.set_title("Confusion Matrix")
|
| 322 |
+
ax.set_xlabel("Predicted")
|
| 323 |
+
ax.set_ylabel("True")
|
| 324 |
+
ax.set_xticks(range(len(labels)))
|
| 325 |
+
ax.set_xticklabels(labels, rotation=45, ha="right")
|
| 326 |
+
ax.set_yticks(range(len(labels)))
|
| 327 |
+
ax.set_yticklabels(labels)
|
| 328 |
+
for i in range(matrix.shape[0]):
|
| 329 |
+
for j in range(matrix.shape[1]):
|
| 330 |
+
ax.text(j, i, str(matrix[i, j]), ha="center", va="center", color="black")
|
| 331 |
+
fig.colorbar(im, ax=ax, fraction=0.046, pad=0.04)
|
| 332 |
+
fig.tight_layout()
|
| 333 |
+
return fig
|
| 334 |
+
|
| 335 |
+
def _plot_regression_scatter(self, y_true, y_pred):
|
| 336 |
+
fig, ax = plt.subplots(figsize=(5.5, 4.5))
|
| 337 |
+
ax.scatter(y_true, y_pred, alpha=0.75)
|
| 338 |
+
min_val = min(np.min(y_true), np.min(y_pred))
|
| 339 |
+
max_val = max(np.max(y_true), np.max(y_pred))
|
| 340 |
+
ax.plot([min_val, max_val], [min_val, max_val], linestyle="--", color="red")
|
| 341 |
+
ax.set_title("Actual vs Predicted")
|
| 342 |
+
ax.set_xlabel("Actual")
|
| 343 |
+
ax.set_ylabel("Predicted")
|
| 344 |
+
fig.tight_layout()
|
| 345 |
+
return fig
|
| 346 |
+
|
| 347 |
+
def _plot_cluster_scatter(self, reduced, labels, title):
|
| 348 |
+
fig, ax = plt.subplots(figsize=(5.5, 4.5))
|
| 349 |
+
scatter = ax.scatter(reduced[:, 0], reduced[:, 1], c=labels, cmap="tab10", alpha=0.85)
|
| 350 |
+
ax.set_title(title)
|
| 351 |
+
ax.set_xlabel("Component 1")
|
| 352 |
+
ax.set_ylabel("Component 2")
|
| 353 |
+
fig.colorbar(scatter, ax=ax, fraction=0.046, pad=0.04)
|
| 354 |
+
fig.tight_layout()
|
| 355 |
+
return fig
|
| 356 |
+
|
| 357 |
+
def _plot_pca_scatter(self, reduced, labels):
|
| 358 |
+
fig, ax = plt.subplots(figsize=(5.5, 4.5))
|
| 359 |
+
if reduced.shape[1] == 1:
|
| 360 |
+
ax.scatter(reduced[:, 0], np.zeros_like(reduced[:, 0]), alpha=0.75)
|
| 361 |
+
ax.set_ylabel("Zero Axis")
|
| 362 |
+
else:
|
| 363 |
+
if labels is not None:
|
| 364 |
+
unique_labels = labels.astype(str)
|
| 365 |
+
for label in sorted(unique_labels.unique())[:8]:
|
| 366 |
+
mask = unique_labels == label
|
| 367 |
+
ax.scatter(reduced[mask, 0], reduced[mask, 1], alpha=0.75, label=label)
|
| 368 |
+
ax.legend(loc="best", fontsize=8)
|
| 369 |
+
else:
|
| 370 |
+
ax.scatter(reduced[:, 0], reduced[:, 1], alpha=0.75)
|
| 371 |
+
ax.set_ylabel("PC2")
|
| 372 |
+
ax.set_title("PCA Projection")
|
| 373 |
+
ax.set_xlabel("PC1")
|
| 374 |
+
fig.tight_layout()
|
| 375 |
+
return fig
|
requirements.txt
ADDED
|
@@ -0,0 +1,5 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
gradio>=5.23.0
|
| 2 |
+
matplotlib>=3.10.1
|
| 3 |
+
numpy>=2.1.0
|
| 4 |
+
pandas>=2.2.3
|
| 5 |
+
scikit-learn>=1.6.1
|