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Browse files- .gitattributes +1 -0
- app.py +26 -0
- pneumonia_model_clean.keras +3 -0
- preprocessing.py +17 -0
- requirements.txt +7 -0
.gitattributes
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@@ -33,3 +33,4 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
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*.zip filter=lfs diff=lfs merge=lfs -text
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*.zst filter=lfs diff=lfs merge=lfs -text
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*tfevents* filter=lfs diff=lfs merge=lfs -text
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*.zip filter=lfs diff=lfs merge=lfs -text
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*.zst filter=lfs diff=lfs merge=lfs -text
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*tfevents* filter=lfs diff=lfs merge=lfs -text
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pneumonia_model_clean.keras filter=lfs diff=lfs merge=lfs -text
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app.py
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import tensorflow as tf
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import gradio as gr
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from preprocessing import preprocess_dicom
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# Load model once
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model = tf.keras.models.load_model("pneumonia_model_clean.keras")
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def predict(file):
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img = preprocess_dicom(file.name)
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prob = float(model.predict(img)[0][0])
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if prob >= 0.5:
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return f"PNEUMONIA (confidence: {prob:.2f})"
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else:
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return f"NORMAL (confidence: {1 - prob:.2f})"
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demo = gr.Interface(
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fn=predict,
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inputs=gr.File(label="Upload Chest X-ray (DICOM)"),
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outputs=gr.Textbox(label="Prediction"),
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title="Pneumonia Screening (DenseNet)",
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description="DICOM-based pneumonia screening model"
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)
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if __name__ == "__main__":
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demo.launch()
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pneumonia_model_clean.keras
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version https://git-lfs.github.com/spec/v1
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oid sha256:6135dbfa67bf67e9b7ef53d1c3d5db05bc3f701495a7659b65ddfc490cbcbd60
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size 30710690
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preprocessing.py
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import numpy as np
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import pydicom
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import cv2
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def load_dicom_image(path):
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ds = pydicom.dcmread(path)
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img = ds.pixel_array.astype(np.float32)
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return img
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def resize_image(img, target_size=(224, 224)):
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return cv2.resize(img, target_size, interpolation=cv2.INTER_LINEAR)
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def normalize_image(img):
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return img / 255.0
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def to_3channel(img):
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return np.stack([img, img, img], axis=-1)
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requirements.txt
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tensorflow>=2.16
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keras>=3.0
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gradio
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numpy
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pydicom
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opencv-python-headless
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