debugging

.ipynb_checkpoints/app-checkpoint.py

@@ -388,7 +388,11 @@ def Plv(volume, Emax, Emin, t, Tc, Vd):
 def Elastance(Emax,Emin, t, Tc):
     t = t-int(t/Tc)*Tc #can remove this if only want 1st ED (and the 1st ES before)
     tn = t/(0.2+0.15*Tc)
-    return (Emax-Emin)*1.55*(tn/0.7)**1.9/((tn/0.7)**1.9+1)*1/((tn/1.17)**21.9+1) + Emin
+    print(tn)
+    print(Emax)
+    print(Emin)
+    print(Tc)
+    return (Emax-Emin)*1.55*(tn/0.7)**1.9/((tn/0.7)**1.9+1.0)*1.0/((tn/1.17)**21.9+1.0) + Emin
 
 def solve_ODE_for_volume(Rm, Ra, Emax, Emin, Vd, Tc, start_v, t):
     
@@ -524,7 +528,7 @@ def lvad_ode(y, t, Rs, Rm, Ra, Rc, Ca, Cs, Cr, Ls, Emax, Emin, Tc, Vd, ratew):
     #from simaan2008dynamical:
     Ri = 0.0677
     R0 = 0.0677
-    Rk = 0
+    Rk = 0.0
     x1bar = 1.
     alpha = -3.5
     Li = 0.0127
@@ -539,7 +543,7 @@ def lvad_ode(y, t, Rs, Rm, Ra, Rc, Ca, Cs, Cr, Ls, Emax, Emin, Tc, Vd, ratew):
     if (P_lv <= x1bar): Rk = alpha * (P_lv - x1bar)
     Lstar = Li + L0 + b1
     Lstar2 = -Li -L0 +b1
-    Rstar = Ri + + R0 + Rk + b0
+    Rstar = Ri + R0 + Rk + b0
 
     dydt = [-x6 + r(x2-P_lv)/Rm-r(P_lv-x4)/Ra, (x3-x2)/(Rs*Cr)-r(x2-P_lv)/(Cr*Rm), (x2-x3)/(Rs*Cs)+x5/Cs, -x5/Ca+r(P_lv-x4)/(Ca*Ra) + x6/Ca, (x4-x3)/Ls-Rc*x5/Ls, -P_lv / Lstar2 + x4/Lstar2 + (Ri+R0+Rk-b0) / Lstar2 * x6 - b2 / Lstar2 * x7**2, ratew]
 
@@ -554,7 +558,7 @@ def f_nolvad(Tc, start_v, Emax, showpvloop):
     start_pla = float(start_v*Elastance(Emax, Emin, 0.0, Tc))
     start_pao = 75.
     start_pa = start_pao
-    start_qt = 0 #aortic flow is Q_T and is 0 at ED, also see Fig5 in simaan2008dynamical
+    start_qt = 0.0 #aortic flow is Q_T and is 0 at ED, also see Fig5 in simaan2008dynamical
 
     y0 = [start_v, start_pla, start_pa, start_pao, start_qt]
 
@@ -789,7 +793,7 @@ def lvad_plots(Rm, Ra, Emax, Emin, Vd, Tc, start_v, gamma):
     Ls=0.0005
     
     #get values for periodic loops:
-    ef_nolvad, pao_ed, pao_es, co_nolvad, y00, y01, y02, y03, y04, Vlv0, Plv0 = f_nolvad(Tc, start_v, Emax, 0)
+    ef_nolvad, pao_ed, pao_es, co_nolvad, y00, y01, y02, y03, y04, Vlv0, Plv0 = f_nolvad(Tc, start_v, Emax, 0.0)
     #pao_eds = [pao_ed]
     #pao_ess = [pao_es]
     

app.py

@@ -388,7 +388,11 @@ def Plv(volume, Emax, Emin, t, Tc, Vd):
 def Elastance(Emax,Emin, t, Tc):
     t = t-int(t/Tc)*Tc #can remove this if only want 1st ED (and the 1st ES before)
     tn = t/(0.2+0.15*Tc)
-    return (Emax-Emin)*1.55*(tn/0.7)**1.9/((tn/0.7)**1.9+1)*1/((tn/1.17)**21.9+1) + Emin
+    print(tn)
+    print(Emax)
+    print(Emin)
+    print(Tc)
+    return (Emax-Emin)*1.55*(tn/0.7)**1.9/((tn/0.7)**1.9+1.0)*1.0/((tn/1.17)**21.9+1.0) + Emin
 
 def solve_ODE_for_volume(Rm, Ra, Emax, Emin, Vd, Tc, start_v, t):
     
@@ -524,7 +528,7 @@ def lvad_ode(y, t, Rs, Rm, Ra, Rc, Ca, Cs, Cr, Ls, Emax, Emin, Tc, Vd, ratew):
     #from simaan2008dynamical:
     Ri = 0.0677
     R0 = 0.0677
-    Rk = 0
+    Rk = 0.0
     x1bar = 1.
     alpha = -3.5
     Li = 0.0127
@@ -539,7 +543,7 @@ def lvad_ode(y, t, Rs, Rm, Ra, Rc, Ca, Cs, Cr, Ls, Emax, Emin, Tc, Vd, ratew):
     if (P_lv <= x1bar): Rk = alpha * (P_lv - x1bar)
     Lstar = Li + L0 + b1
     Lstar2 = -Li -L0 +b1
-    Rstar = Ri + + R0 + Rk + b0
+    Rstar = Ri + R0 + Rk + b0
 
     dydt = [-x6 + r(x2-P_lv)/Rm-r(P_lv-x4)/Ra, (x3-x2)/(Rs*Cr)-r(x2-P_lv)/(Cr*Rm), (x2-x3)/(Rs*Cs)+x5/Cs, -x5/Ca+r(P_lv-x4)/(Ca*Ra) + x6/Ca, (x4-x3)/Ls-Rc*x5/Ls, -P_lv / Lstar2 + x4/Lstar2 + (Ri+R0+Rk-b0) / Lstar2 * x6 - b2 / Lstar2 * x7**2, ratew]
 
@@ -554,7 +558,7 @@ def f_nolvad(Tc, start_v, Emax, showpvloop):
     start_pla = float(start_v*Elastance(Emax, Emin, 0.0, Tc))
     start_pao = 75.
     start_pa = start_pao
-    start_qt = 0 #aortic flow is Q_T and is 0 at ED, also see Fig5 in simaan2008dynamical
+    start_qt = 0.0 #aortic flow is Q_T and is 0 at ED, also see Fig5 in simaan2008dynamical
 
     y0 = [start_v, start_pla, start_pa, start_pao, start_qt]
 
@@ -789,7 +793,7 @@ def lvad_plots(Rm, Ra, Emax, Emin, Vd, Tc, start_v, gamma):
     Ls=0.0005
     
     #get values for periodic loops:
-    ef_nolvad, pao_ed, pao_es, co_nolvad, y00, y01, y02, y03, y04, Vlv0, Plv0 = f_nolvad(Tc, start_v, Emax, 0)
+    ef_nolvad, pao_ed, pao_es, co_nolvad, y00, y01, y02, y03, y04, Vlv0, Plv0 = f_nolvad(Tc, start_v, Emax, 0.0)
     #pao_eds = [pao_ed]
     #pao_ess = [pao_es]