Update model.py
Browse files
model.py
CHANGED
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import chromadb
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import traceback
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import os
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from transformers import AutoTokenizer, AutoModelForSeq2SeqLM, pipeline
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from retriever import retrieve
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from utils import build_prompt, refine_response
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_vector_store = None
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_finetuned_llm = None
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def get_vector_store():
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"""Load vector store (lazy-loaded on first use)"""
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global _vector_store
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if _vector_store is None:
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db_path = "./MedQuAD_db"
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os.makedirs(db_path, exist_ok=True)
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db_client = chromadb.PersistentClient(path=db_path)
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try:
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_vector_store = db_client.get_collection("medical_rag")
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except:
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#
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_vector_store = db_client.create_collection(name="medical_rag")
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return _vector_store
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def get_finetuned_llm():
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@@ -49,8 +42,13 @@ def get_finetuned_llm():
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return _finetuned_llm
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def rag(user_query):
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"""Main RAG function: retrieve context and generate answer.
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Returns: str(generated_answer)"""
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try:
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vector_store = get_vector_store()
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finetuned_llm = get_finetuned_llm()
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# Check for emergency keywords
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emergency_keywords = ["emergency", "severe pain", "bleeding",
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if any(keyword in user_query.lower() for keyword in emergency_keywords):
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emergency_msg = """I am an AI and cannot provide medical advice for emergencies.
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PLEASE contact emergency services or a medical professional immediately."""
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# Retrieve relevant contexts
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contexts = retrieve(vector_store, user_query, top_k=3, use_reranking=True)
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if not contexts:
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return "I'm not confident about my answer (0%).\n\nCouldn't find relevant information to answer your question."
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# Build prompt
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prompt = build_prompt(user_query, contexts)
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result = finetuned_llm(
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prompt,
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max_new_tokens=70,
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@@ -87,18 +121,23 @@ PLEASE contact emergency services or a medical professional immediately."""
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answer = result[0]['generated_text'].strip()
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answer = refine_response(answer)
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# Calculate confidence score
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if contexts and len(contexts) > 0:
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avg_distance = sum(c.get('chroma_distance', 1.0) for c in contexts) / len(contexts)
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confidence_score = (1 - avg_distance) * 100
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confidence_score = max(0, min(100, confidence_score))
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if confidence_score < 40:
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else:
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return
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except Exception as e:
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import chromadb
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import traceback
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from transformers import AutoTokenizer, AutoModelForSeq2SeqLM, pipeline
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from retriever import retrieve
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from utils import build_prompt, refine_response
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_vector_store = None
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_finetuned_llm = None
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_base_model = None
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def get_vector_store():
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"""Load vector store (lazy-loaded on first use)"""
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global _vector_store
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if _vector_store is None:
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db_client = chromadb.PersistentClient(path="./MedQuAD_db")
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try:
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_vector_store = db_client.get_collection("medical_rag")
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except:
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# If collection doesn't exist, create it
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_vector_store = db_client.create_collection(name="medical_rag")
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return _vector_store
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def get_finetuned_llm():
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return _finetuned_llm
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# ============================================================================
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# MAIN RAG FUNCTION
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# ============================================================================
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def rag(user_query):
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"""Main RAG function: retrieve context and generate answer.
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Takes a question string and returns an answer string with confidence.
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Returns: str(generated_answer)"""
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try:
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vector_store = get_vector_store()
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finetuned_llm = get_finetuned_llm()
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# 1. Check for emergency keywords
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emergency_keywords = ["emergency", "severe pain", "bleeding",
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"blind", "lose consciousness", "pass out"]
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if any(keyword in user_query.lower() for keyword in emergency_keywords):
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emergency_msg = """I am an AI and cannot provide medical advice for emergencies.
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PLEASE contact emergency services or a medical professional immediately."""
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try:
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# Still generate answer for context
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contexts = retrieve(vector_store, user_query, top_k=3, use_reranking=True)
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if not contexts:
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return f"{emergency_msg}\n\nNo relevant information found for your query."
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prompt = build_prompt(user_query, contexts)
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result = finetuned_llm(
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prompt,
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max_new_tokens=70,
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num_beams=3,
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early_stopping=True,
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do_sample=False,
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repetition_penalty=1.4,
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eos_token_id=finetuned_llm.tokenizer.eos_token_id
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)
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answer = result[0]['generated_text'].strip()
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answer = refine_response(answer)
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# Calculate confidence
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if contexts:
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avg_distance = sum(c.get('chroma_distance', 1.0) for c in contexts) / len(contexts)
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confidence_score = (1 - avg_distance) * 100
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confidence_score = max(0, min(100, confidence_score))
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else:
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confidence_score = 0
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return f"{emergency_msg}\n\n[Confidence: {confidence_score:.1f}%]\n\n{answer}"
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except Exception as e:
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return f"{emergency_msg}\n\nError generating answer: {str(e)}"
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# 2. Retrieve relevant contexts
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contexts = retrieve(vector_store, user_query, top_k=3, use_reranking=True)
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if not contexts:
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return "I'm not confident about my answer (0%).\n\nCouldn't find relevant information to answer your question."
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# 3. Build prompt with context
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prompt = build_prompt(user_query, contexts)
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# 4. Generate answer
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result = finetuned_llm(
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prompt,
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max_new_tokens=70,
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answer = result[0]['generated_text'].strip()
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answer = refine_response(answer)
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# 5. Calculate confidence score based on retrieval quality
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if contexts and len(contexts) > 0:
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avg_distance = sum(c.get('chroma_distance', 1.0) for c in contexts) / len(contexts)
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confidence_score = (1 - avg_distance) * 100
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confidence_score = max(0, min(100, confidence_score))
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# Build final response with confidence
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if confidence_score < 40:
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final_response = f"I'm not confident about my answer ({confidence_score:.1f}%).\n\n{answer}"
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else:
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final_response = f"{answer}\n\n[Confidence: {confidence_score:.1f}%]"
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else:
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final_response = "I'm not confident about my answer (0%).\n\n" + answer
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return final_response
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except Exception as e:
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error_msg = f"ERROR in RAG pipeline: {str(e)}\n\nTraceback:\n{traceback.format_exc()}"
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print(error_msg)
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return error_msg
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