baakaani commited on
Commit
c299516
·
1 Parent(s): 2262a54

changes to github actions

Browse files
.github/workflows/test_gedi.yml CHANGED
@@ -69,6 +69,14 @@ jobs:
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  run:
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  diff data/validation/genELexperiment1_04_02.json output/features/grid_feat/2_enself_rt20v/genELexperiment1_04_02.json
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  test_benchmark:
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  runs-on: ubuntu-latest
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  run:
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  diff data/validation/genELexperiment1_04_02.json output/features/grid_feat/2_enself_rt20v/genELexperiment1_04_02.json
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+ - name: Compare output 3
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+ run:
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+ diff data/validation/genELexperiment3_04.json output/features/grid_feat/1_enself/genELexperiment3_04.json
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+
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+ - name: Compare output 4
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+ run:
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+ diff data/validation/genELexperiment4_02.json output/features/grid_feat/1_rt20v/genELexperiment4_02.json
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+
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  test_benchmark:
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  runs-on: ubuntu-latest
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data/test/grid_feat.csv CHANGED
@@ -1,3 +1,5 @@
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  log,ratio_top_20_variants,epa_normalized_sequence_entropy_linear_forgetting
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  experiment1,0.2,0.4
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  experiment2,0.4,0.7
 
 
 
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  log,ratio_top_20_variants,epa_normalized_sequence_entropy_linear_forgetting
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  experiment1,0.2,0.4
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  experiment2,0.4,0.7
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+ experiment3,NaN,0.4
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+ experiment4,0.2,NaN
data/validation/genELexperiment3_04.json ADDED
@@ -0,0 +1 @@
 
 
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+ {"epa_normalized_sequence_entropy_linear_forgetting": 0.052097205658647734, "log": "experiment3"}
data/validation/genELexperiment4_02.json ADDED
@@ -0,0 +1 @@
 
 
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+ {"ratio_top_20_variants": 0.20057306590257878, "log": "experiment4"}