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Browse files
.github/workflows/test_gedi.yml
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run:
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diff data/validation/genELexperiment1_04_02.json output/features/grid_feat/2_enself_rt20v/genELexperiment1_04_02.json
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test_benchmark:
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runs-on: ubuntu-latest
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run:
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diff data/validation/genELexperiment1_04_02.json output/features/grid_feat/2_enself_rt20v/genELexperiment1_04_02.json
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- name: Compare output 3
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run:
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diff data/validation/genELexperiment3_04.json output/features/grid_feat/1_enself/genELexperiment3_04.json
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- name: Compare output 4
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run:
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diff data/validation/genELexperiment4_02.json output/features/grid_feat/1_rt20v/genELexperiment4_02.json
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test_benchmark:
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runs-on: ubuntu-latest
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data/test/grid_feat.csv
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log,ratio_top_20_variants,epa_normalized_sequence_entropy_linear_forgetting
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experiment1,0.2,0.4
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experiment2,0.4,0.7
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log,ratio_top_20_variants,epa_normalized_sequence_entropy_linear_forgetting
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experiment1,0.2,0.4
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experiment2,0.4,0.7
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experiment3,NaN,0.4
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experiment4,0.2,NaN
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data/validation/genELexperiment3_04.json
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{"epa_normalized_sequence_entropy_linear_forgetting": 0.052097205658647734, "log": "experiment3"}
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data/validation/genELexperiment4_02.json
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{"ratio_top_20_variants": 0.20057306590257878, "log": "experiment4"}
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