Anirudh Balaraman commited on
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Fix formatting in project structure section of README

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  1. README.md +14 -14
README.md CHANGED
@@ -108,26 +108,26 @@ See the [full documentation](https://anirudhbalaraman.github.io/WSAttention-Pros
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  ```
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  WSAttention-Prostate/
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- β”œβ”€β”€ run_pirads.py # PI-RADS training/testing entry point
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- β”œβ”€β”€ run_cspca.py # csPCa training/testing entry point
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- β”œβ”€β”€ run_inference.py # Full inference pipeline
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- β”œβ”€β”€ preprocess_main.py # Preprocessing entry point
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- β”œβ”€β”€ config/ # YAML configuration files
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  β”œβ”€β”€ src/
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  β”‚ β”œβ”€β”€ model/
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- β”‚ β”‚ β”œβ”€β”€ MIL.py # MILModel_3D β€” core MIL architecture, PI-RADS model
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- β”‚ β”‚ └── csPCa_model.py # csPCa_Model
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  β”‚ β”œβ”€β”€ data/
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- β”‚ β”‚ β”œβ”€β”€ data_loader.py # MONAI data pipeline
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  β”‚ β”‚ └── custom_transforms.py # Custom MONAI transforms
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  β”‚ β”œβ”€β”€ train/
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- β”‚ β”‚ β”œβ”€β”€ train_pirads.py # PI-RADS training loop
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- β”‚ β”‚ └── train_cspca.py # csPCa training loop
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- β”‚ β”œβ”€β”€ preprocessing/ # Registration, segmentation, histogram matching, heatmaps
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- β”‚ └── utils.py # Shared utilities
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  β”œβ”€β”€ tests/
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- β”œβ”€β”€ dataset/ # Reference images for histogram matching
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- └── models/ # Downloaded checkpoints (not in repo)
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  ```
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  ## πŸ™ Acknowledgement
 
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  ```
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  WSAttention-Prostate/
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+ β”œβ”€β”€ run_pirads.py # PI-RADS training/testing entry point
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+ β”œβ”€β”€ run_cspca.py # csPCa training/testing entry point
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+ β”œβ”€β”€ run_inference.py # Full inference pipeline
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+ β”œβ”€β”€ preprocess_main.py # Preprocessing entry point
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+ β”œβ”€β”€ config/ # YAML configuration files
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  β”œβ”€β”€ src/
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  β”‚ β”œβ”€β”€ model/
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+ β”‚ β”‚ β”œβ”€β”€ MIL.py # MILModel_3D β€” core MIL architecture, PI-RADS model
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+ β”‚ β”‚ └── csPCa_model.py # csPCa_Model
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  β”‚ β”œβ”€β”€ data/
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+ β”‚ β”‚ β”œβ”€β”€ data_loader.py # MONAI data pipeline
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  β”‚ β”‚ └── custom_transforms.py # Custom MONAI transforms
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  β”‚ β”œβ”€β”€ train/
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+ β”‚ β”‚ β”œβ”€β”€ train_pirads.py # PI-RADS training loop
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+ β”‚ β”‚ └── train_cspca.py # csPCa training loop
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+ β”‚ β”œβ”€β”€ preprocessing/ # Registration, segmentation, histogram matching, heatmaps
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+ β”‚ └── utils.py # Shared utilities
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  β”œβ”€β”€ tests/
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+ β”œβ”€β”€ dataset/ # Reference images for histogram matching
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+ └── models/ # Downloaded checkpoints (not in repo)
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  ```
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  ## πŸ™ Acknowledgement