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Browse files- Dockerfile +10 -0
- app.py +129 -0
- mri_detector.h5 +3 -0
- requirements.txt +7 -0
Dockerfile
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FROM python:3.10-slim
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WORKDIR /code
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COPY requirements.txt .
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RUN pip install --no-cache-dir -r requirements.txt
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COPY . .
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CMD ["uvicorn", "app:app", "--host", "0.0.0.0", "--port", "7860"]
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app.py
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from fastapi import FastAPI, UploadFile, File, HTTPException
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from fastapi.middleware.cors import CORSMiddleware
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import tensorflow as tf
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import numpy as np
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from PIL import Image
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import io
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import httpx
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app = FastAPI()
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# Enable CORS
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app.add_middleware(
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CORSMiddleware,
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allow_origins=["*"],
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allow_credentials=True,
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allow_methods=["*"],
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allow_headers=["*"],
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)
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# Load the MRI detector model
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mri_detector_model = tf.keras.models.load_model('mri_detector.h5')
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# Class labels for MRI detector
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MRI_CLASS_LABELS = ["Brain MRI", "Not a Brain MRI"]
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# Dementia API endpoint
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DEMENTIA_API_URL = "https://arittrabag-dementia-backend.hf.space/analyze"
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def preprocess_image_for_mri_detection(image_bytes):
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"""
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Preprocess image for MRI detection model
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Based on the original preprocessing: resize to (224, 224) and normalize by /255.0
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"""
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# Open image from bytes
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img = Image.open(io.BytesIO(image_bytes))
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# Convert to RGB if needed
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if img.mode != 'RGB':
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img = img.convert('RGB')
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# Resize to model's expected input size (224, 224)
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img = img.resize((224, 224))
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# Convert to numpy array and preprocess exactly like the original
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img_array = np.array(img) / 255.0 # Normalize pixel values
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img_array = np.expand_dims(img_array, axis=0) # Add batch dimension
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return img_array
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async def call_dementia_api(image_bytes):
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"""
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Call the dementia detection API with the uploaded image
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"""
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try:
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async with httpx.AsyncClient(timeout=30.0) as client:
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files = {"file": ("image.jpg", image_bytes, "image/jpeg")}
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response = await client.post(DEMENTIA_API_URL, files=files)
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response.raise_for_status()
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return response.json()
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except httpx.RequestError as e:
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raise HTTPException(status_code=503, detail=f"Failed to connect to dementia API: {str(e)}")
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except httpx.HTTPStatusError as e:
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raise HTTPException(status_code=e.response.status_code, detail=f"Dementia API error: {e.response.text}")
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@app.get("/")
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async def root():
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return {"message": "MRI Detector API - Upload an image to check if it's an MRI scan"}
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@app.post("/detect")
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async def detect_and_analyze(file: UploadFile = File(...)):
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"""
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Main endpoint that:
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1. Checks if uploaded image is an MRI
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2. If MRI, calls dementia detection API
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3. Returns combined results
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"""
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# Validate file type
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if not file.content_type or not file.content_type.startswith('image/'):
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raise HTTPException(status_code=400, detail="File must be an image")
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# Read image file
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contents = await file.read()
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try:
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# Step 1: Check if image is MRI
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img_array = preprocess_image_for_mri_detection(contents)
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mri_predictions = mri_detector_model.predict(img_array)
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# Get MRI detection results
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mri_confidences = mri_predictions[0].tolist()
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predicted_class_idx = np.argmax(mri_confidences)
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predicted_class = MRI_CLASS_LABELS[predicted_class_idx]
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mri_confidence = float(mri_confidences[predicted_class_idx])
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# Create MRI confidence dictionary
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mri_confidence_dict = {label: float(conf) for label, conf in zip(MRI_CLASS_LABELS, mri_confidences)}
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response = {
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"isMRI": predicted_class == "Brain MRI",
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"mriConfidence": mri_confidence,
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"mriClassification": {
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"predictedClass": predicted_class,
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"confidences": mri_confidence_dict
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}
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}
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# Step 2: If it's an MRI, call dementia detection API
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if predicted_class == "Brain MRI":
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try:
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dementia_results = await call_dementia_api(contents)
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response["dementiaAnalysis"] = dementia_results
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response["status"] = "analysis_complete"
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response["message"] = "Image identified as Brain MRI scan. Dementia analysis completed."
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except Exception as e:
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response["status"] = "mri_detected_but_analysis_failed"
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response["message"] = f"Image identified as Brain MRI scan, but dementia analysis failed: {str(e)}"
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response["error"] = str(e)
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else:
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response["status"] = "not_mri"
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response["message"] = f"Image identified as {predicted_class} with {mri_confidence*100:.1f}% confidence. Dementia analysis not performed as this is not a Brain MRI scan."
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return response
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except Exception as e:
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raise HTTPException(status_code=500, detail=f"Error processing image: {str(e)}")
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@app.get("/health")
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async def health_check():
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return {"status": "healthy", "message": "MRI Detector API is running"}
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mri_detector.h5
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version https://git-lfs.github.com/spec/v1
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oid sha256:03055c27dc993ff330e8441fd042c12a6916ad74f66d9ba7fed4bc0585bce276
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size 134077984
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requirements.txt
ADDED
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@@ -0,0 +1,7 @@
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fastapi
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uvicorn
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tensorflow
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numpy
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pillow
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httpx
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python-multipart
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