Update app.py
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app.py
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import streamlit as st
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from PIL import Image, ImageOps
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import numpy as np
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import
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import matplotlib.pyplot as plt
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# Load the TensorFlow model
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model = tf.keras.models.load_model('gastrointestinal_model.h5', compile=False)
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# Load class names
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# Function to create plot
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def create_plot(
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return plt
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# Function to predict gastrointestinal conditions
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def predict_gastrointestinal(img):
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size = (224, 224)
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image_PIL = ImageOps.fit(img, size, Image.LANCZOS)
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image_array = np.asarray(image_PIL)
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normalized_image_array = (image_array.astype(np.float32) / 127.0) - 1
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data =
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return
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# Streamlit app
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st.title("Gastrointestinal Classification Web App")
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uploaded_file = st.file_uploader("Upload
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if uploaded_file is not None:
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image = Image.open(uploaded_file)
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st.image(image, caption='Uploaded Image', use_column_width=True)
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st.write("Classifying...")
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st.write(
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st.pyplot(plot)
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# Sample images
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st.markdown("### Sample Images")
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if st.button('Normal Sample'):
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image = Image.open('
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st.image(image, caption='Normal Sample Image', use_column_width=True)
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st.write("Classifying...")
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st.write(
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st.pyplot(plot)
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if st.button('Ulcerative Colitis Sample'):
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image = Image.open('ulcerative_colitis_sample.jpg')
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st.image(image, caption='Ulcerative Colitis Sample Image', use_column_width=True)
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st.write("Classifying...")
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st.write(
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st.pyplot(plot)
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if st.button('Polyp Sample'):
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image = Image.open('polyp_sample.jpg')
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st.image(image, caption='Polyp Sample Image', use_column_width=True)
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st.write("Classifying...")
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st.write(
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st.pyplot(plot)
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if st.button('Esophagitis Sample'):
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image = Image.open('esophagitis_sample.jpg')
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st.image(image, caption='Esophagitis Sample Image', use_column_width=True)
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st.write("Classifying...")
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st.write(
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st.pyplot(plot)
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# Educational content
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st.markdown("### Learn More About Gastrointestinal Conditions")
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st.markdown("""
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- [Gastrointestinal Disorders Overview](https://www.mayoclinic.org/diseases-conditions/gastrointestinal-disorders/symptoms-causes/syc-20375441)
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- [Preventing Gastrointestinal Conditions](https://www.niddk.nih.gov/health-information/digestive-diseases)
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""")
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import streamlit as st
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from PIL import Image, ImageOps
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import numpy as np
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import seaborn as sns
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import matplotlib.pyplot as plt
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import pandas as pd
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import tensorflow as tf # Use TensorFlow's Keras API
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# Load the TensorFlow Keras model
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model = tf.keras.models.load_model('gastrointestinal_model.h5', compile=False)
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# Load class names
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with open('labels.txt', 'r') as f:
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class_names = f.readlines()
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# Function to create plot
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def create_plot(data):
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sns.set_theme(style="whitegrid")
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f, ax = plt.subplots(figsize=(5, 5))
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sns.set_color_codes("pastel")
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sns.barplot(x="Total", y="Labels", data=data, label="Total", color="b")
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sns.set_color_codes("muted")
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sns.barplot(x="Confidence Score", y="Labels", data=data, label="Confidence Score", color="b")
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ax.legend(ncol=2, loc="lower right", frameon=True)
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sns.despine(left=True, bottom=True)
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return f
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# Function to predict gastrointestinal conditions
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def predict_gastrointestinal(img):
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np.set_printoptions(suppress=True)
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data = np.ndarray(shape=(1, 224, 224, 3), dtype=np.float32)
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size = (224, 224)
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image_PIL = ImageOps.fit(img, size, Image.LANCZOS)
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image_array = np.asarray(image_PIL)
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normalized_image_array = (image_array.astype(np.float32) / 127.0) - 1
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data[0] = normalized_image_array
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prediction = model.predict(data)
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index = np.argmax(prediction)
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class_name = class_names[index].strip()
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confidence_score = prediction[0][index]
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other_class = [name for i, name in enumerate(class_names) if i != index][0].strip()
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result = {
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"Labels": [class_name, other_class],
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"Confidence Score": [confidence_score * 100, (1 - confidence_score) * 100],
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"Total": 100
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}
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data_for_plot = pd.DataFrame.from_dict(result)
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plot = create_plot(data_for_plot)
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if class_name == "Normal":
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prediction_text = "The image is classified as Normal."
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else:
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prediction_text = f"The image shows signs of {class_name}."
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return prediction_text, plot
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# Streamlit app
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st.title("Gastrointestinal Classification Web App")
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uploaded_file = st.file_uploader("Upload a gastrointestinal image...", type=["jpg", "jpeg", "png"])
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if uploaded_file is not None:
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image = Image.open(uploaded_file)
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st.image(image, caption='Uploaded Image', use_column_width=True)
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st.write("Classifying...")
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prediction, plot = predict_gastrointestinal(image)
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st.write(prediction)
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st.pyplot(plot)
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# Sample images
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st.markdown("### Sample Images")
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if st.button('Normal Sample'):
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image = Image.open('normal_Sample.jpg')
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st.image(image, caption='Normal Sample Image', use_column_width=True)
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st.write("Classifying...")
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prediction, plot = predict_gastrointestinal(image)
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st.write(prediction)
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st.pyplot(plot)
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if st.button('Ulcerative Colitis Sample'):
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image = Image.open('ulcerative_colitis_sample.jpg')
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st.image(image, caption='Ulcerative Colitis Sample Image', use_column_width=True)
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st.write("Classifying...")
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prediction, plot = predict_gastrointestinal(image)
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st.write(prediction)
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st.pyplot(plot)
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if st.button('Polyp Sample'):
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image = Image.open('polyp_sample.jpg')
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st.image(image, caption='Polyp Sample Image', use_column_width=True)
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st.write("Classifying...")
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prediction, plot = predict_gastrointestinal(image)
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st.write(prediction)
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st.pyplot(plot)
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if st.button('Esophagitis Sample'):
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image = Image.open('esophagitis_sample.jpg')
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st.image(image, caption='Esophagitis Sample Image', use_column_width=True)
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st.write("Classifying...")
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prediction, plot = predict_gastrointestinal(image)
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st.write(prediction)
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st.pyplot(plot)
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