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Update src/streamlit_app.py
Browse files- src/streamlit_app.py +247 -228
src/streamlit_app.py
CHANGED
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@@ -129,40 +129,44 @@ def analyze_model_architecture(model):
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'conv_layers': [],
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'dense_layers': [],
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'other_layers': [],
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'
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'model_type': 'Unknown'
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}
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for i, layer in enumerate(model.layers):
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layer_type = type(layer).__name__
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layer_info = {
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'index': i,
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'name': layer.name,
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'type': layer_type,
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'output_shape': getattr(layer, 'output_shape', 'Unknown')
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}
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#
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if any(conv_type in layer_type for conv_type in [
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'Conv1D', 'Conv2D', 'Conv3D', 'SeparableConv2D', 'DepthwiseConv2D',
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'Convolution1D', 'Convolution2D', 'Convolution3D'
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]):
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layer_analysis['conv_layers'].append(layer_info)
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layer_analysis['potential_gradcam_layers'].append(layer_info)
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elif 'Dense' in layer_type or 'Linear' in layer_type:
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layer_analysis['dense_layers'].append(layer_info)
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elif any(layer_name in layer_type for layer_name in [
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'Activation', 'BatchNormalization', 'Dropout', 'MaxPooling', 'AveragePooling',
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'GlobalMaxPooling', 'GlobalAveragePooling', 'Flatten', 'Reshape'
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]):
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layer_analysis['other_layers'].append(layer_info)
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# Some of these might be suitable for Grad-CAM if they have spatial dimensions
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if any(pool_type in layer_type for pool_type in ['MaxPooling2D', 'AveragePooling2D']):
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layer_analysis['potential_gradcam_layers'].append(layer_info)
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# Determine model type
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if layer_analysis['conv_layers']:
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@@ -174,124 +178,112 @@ def analyze_model_architecture(model):
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return layer_analysis
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def
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"""
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return best_layer['name'], f"β
Using convolutional layer: {best_layer['name']} ({best_layer['type']})"
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# Priority 2: Pooling layers with spatial dimensions
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pooling_layers = [layer for layer in analysis['other_layers']
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if any(pool_type in layer['type'] for pool_type in ['MaxPooling2D', 'AveragePooling2D'])]
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if pooling_layers:
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best_layer = pooling_layers[-1]
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return best_layer['name'], f"β οΈ Using pooling layer: {best_layer['name']} ({best_layer['type']}) - may not work well"
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# Priority 3: Try any layer with 4D output (batch, height, width, channels)
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for layer in reversed(model.layers):
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try:
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output_shape = layer.output_shape
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if isinstance(output_shape, tuple) and len(output_shape) == 4:
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return layer.name, f"β οΈ Trying 4D layer: {layer.name} ({type(layer).__name__}) - experimental"
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except:
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continue
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# Priority 4: Try the layer before the last dense layer
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if analysis['dense_layers'] and len(model.layers) > 2:
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# Find the layer just before the first dense layer
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for i, layer in enumerate(model.layers):
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if 'Dense' in type(layer).__name__:
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if i > 0:
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prev_layer = model.layers[i-1]
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return prev_layer.name, f"β οΈ Using pre-dense layer: {prev_layer.name} ({type(prev_layer).__name__}) - may not work"
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break
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return None, "β No suitable layers found for Grad-CAM"
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def make_gradcam_heatmap(img_array, model, layer_name, pred_index=None):
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"""Generate Grad-CAM heatmap with better error handling."""
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try:
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target_layer = model.get_layer(layer_name)
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grad_model = tf.keras.Model(
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inputs=[model.inputs],
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outputs=[target_layer.output, model.output]
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)
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with tf.GradientTape() as tape:
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layer_output, preds = grad_model(img_array)
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if pred_index is None:
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pred_index = tf.argmax(preds[0])
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class_channel = preds[:, pred_index]
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grads = tape.gradient(class_channel, layer_output)
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if grads is None:
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pooled_grads = tf.reduce_mean(grads, axis=(0, 1, 2))
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layer_output = layer_output[0]
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heatmap = layer_output @ pooled_grads[..., tf.newaxis]
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heatmap = tf.squeeze(heatmap)
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elif len(layer_output.shape) == 2: # Dense layer
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# Create a
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heatmap = tf.ones((
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else:
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#
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heatmap = tf.maximum(heatmap, 0)
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if tf.reduce_max(heatmap) > 0:
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heatmap = heatmap / tf.reduce_max(heatmap)
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except Exception as e:
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def enhance_heatmap_contrast(heatmap):
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"""Enhance heatmap contrast and dynamic range."""
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if heatmap is None:
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return None
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# Apply histogram equalization-like enhancement
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heatmap_flat = heatmap.flatten()
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# Remove zeros for better contrast
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non_zero_values = heatmap_flat[heatmap_flat > 0]
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if len(non_zero_values) == 0:
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return heatmap
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# Enhance contrast using percentile stretching
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p2, p98 = np.percentile(non_zero_values, [2, 98])
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heatmap_enhanced = np.clip((heatmap - p2) / (p98 - p2), 0, 1)
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# Apply power law transformation for better visibility
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gamma = 0.5 # Makes mid-tones brighter
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heatmap_enhanced = np.power(heatmap_enhanced, gamma)
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return heatmap_enhanced
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def
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"""Create
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try:
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# Preprocess image
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img_resized = img.resize((224, 224))
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# Normalize and add batch dimension
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img_array = np.expand_dims(img_array, axis=0) / 255.0
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#
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#
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model,
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layer_name,
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pred_index=np.argmax(predictions)
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heatmap_enhanced = enhance_heatmap_contrast(heatmap_resized)
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# Get statistics for debugging
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stats = {
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'min': float(np.min(heatmap_enhanced)),
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'max': float(np.max(heatmap_enhanced)),
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'mean': float(np.mean(heatmap_enhanced)),
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'std': float(np.std(heatmap_enhanced))
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}
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except Exception as e:
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return None, f"β Grad-CAM error: {str(e)}", None
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def predict_stroke(img, model):
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"""Predict stroke type from image."""
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except Exception as e:
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return None, f"Prediction error: {str(e)}"
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def
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"""Create a simulated heatmap
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try:
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confidence = np.max(predictions)
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np.
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center_x, center_y = 112, 112
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y, x = np.ogrid[:224, :224]
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mask = (x - center_x)**2 + (y - center_y)**2
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heatmap = np.exp(-mask / (2 * (50**2))) * confidence
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#
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stats = {
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'min': float(np.min(
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'max': float(np.max(
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'mean': float(np.mean(
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'std': float(np.std(
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}
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return
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except Exception as e:
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return None, f"β Simulated heatmap error: {str(e)}", None
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def
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"""Create
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if not MPL_AVAILABLE:
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return None, "β Matplotlib not available"
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heatmap = None
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status_message = ""
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stats = None
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# Try Grad-CAM first
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if force_gradcam and model is not None:
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result =
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if result and len(result)
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heatmap, gradcam_status, stats = result
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status_message = gradcam_status
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# Fallback to simulated if Grad-CAM failed
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if heatmap is None:
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result =
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if result and len(result) == 3:
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heatmap, sim_status, stats = result
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if status_message:
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status_message = sim_status
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if heatmap is None:
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return None, "β Could not generate any heatmap"
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# Create
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fig, axes = plt.subplots(1, 3, figsize=(15, 5))
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# 1. Original image
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axes[0].set_title("Original Image", fontsize=12, fontweight='bold')
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axes[0].axis('off')
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# 2. Heatmap only
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im1 = axes[1].imshow(heatmap, cmap=colormap, vmin=0, vmax=1)
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axes[1].set_title(f"Attention Heatmap ({colormap})", fontsize=12, fontweight='bold')
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axes[1].axis('off')
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plt.colorbar(im1, ax=axes[1], fraction=0.046, pad=0.04)
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# 3. Overlay
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axes[2].imshow(img_array)
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im2 = axes[2].imshow(heatmap, cmap=colormap, alpha=0.6, vmin=0, vmax=1, interpolation='bilinear')
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plt.tight_layout()
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return fig, status_message, stats
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except Exception as e:
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return None, f"β Visualization error: {str(e)}", None
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# Main App
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def main():
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# Enhanced model architecture analysis
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if st.session_state.model is not None:
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with st.expander("π
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analysis = analyze_model_architecture(st.session_state.model)
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st.write("**π Model Summary:**")
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st.write(f"- **Dense Layers:** {len(analysis['dense_layers'])}")
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st.write(f"- **Other Layers:** {len(analysis['other_layers'])}")
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# Show layer
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if analysis['dense_layers']:
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st.write("**π§ Dense Layers:**")
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for layer in analysis['dense_layers']:
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st.write(f" β’ {layer['name']} ({layer['type']}) - Shape: {layer['output_shape']}")
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# Test layer selection
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layer_name, layer_status = find_best_layer_for_gradcam(st.session_state.model)
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if "β
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st.markdown(f'<div class="status-box success"><strong>Grad-CAM Layer:</strong> {layer_status}</div>', unsafe_allow_html=True)
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elif "β οΈ" in layer_status:
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st.markdown(f'<div class="status-box warning"><strong>Grad-CAM Layer:</strong> {layer_status}</div>', unsafe_allow_html=True)
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else:
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st.markdown(f'<div class="status-box error"><strong>Grad-CAM Layer:</strong> {layer_status}</div>', unsafe_allow_html=True)
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# Manual reload button
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if st.button("π Reload Model", help="Try to reload the model"):
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force_gradcam = st.checkbox(
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"Attempt Grad-CAM",
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value=True,
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help="Try Grad-CAM
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colormap = st.selectbox(
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show_probabilities = st.checkbox("Show All Probabilities", value=True)
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show_debug = st.checkbox("Show Debug Info", value=True)
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show_stats = st.checkbox("Show Heatmap Statistics", value=True)
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st.markdown("---")
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st.header("π¨ Color Scheme Guide")
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st.info("""
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**hot**: Red-Yellow (classic heat)
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**jet**: Blue-Green-Yellow-Red
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**viridis**: Purple-Blue-Green-Yellow
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**plasma**: Purple-Pink-Yellow
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**inferno**: Black-Purple-Red-Yellow
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**magma**: Black-Purple-Pink-White
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**coolwarm**: Blue-White-Red
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""")
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if uploaded_file is not None:
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# Load image
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st.error("β Model not loaded. Check the debug information above to see available files.")
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with col2:
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st.subheader("π―
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if st.session_state.model is not None and 'predictions' in locals() and predictions is not None:
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# Create
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with st.spinner("π¨ Generating
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result =
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| 639 |
image,
|
| 640 |
predictions,
|
| 641 |
st.session_state.model,
|
|
@@ -646,6 +653,7 @@ def main():
|
|
| 646 |
if result and len(result) >= 2:
|
| 647 |
overlay_fig, status_message = result[0], result[1]
|
| 648 |
stats = result[2] if len(result) > 2 else None
|
|
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|
| 649 |
|
| 650 |
if overlay_fig is not None:
|
| 651 |
st.pyplot(overlay_fig)
|
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@@ -658,20 +666,30 @@ def main():
|
|
| 658 |
elif "β οΈ" in status_message:
|
| 659 |
st.warning(f"β οΈ {status_message}")
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| 660 |
else:
|
| 661 |
-
st.
|
| 662 |
|
| 663 |
# Show heatmap statistics
|
| 664 |
if show_stats and stats:
|
| 665 |
st.write("**π Heatmap Statistics:**")
|
| 666 |
-
|
| 667 |
-
|
| 668 |
-
|
| 669 |
-
st.
|
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-
|
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-
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-
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| 673 |
else:
|
| 674 |
st.error(f"Could not generate visualization: {status_message}")
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| 675 |
else:
|
| 676 |
st.error("Could not generate attention visualization")
|
| 677 |
else:
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@@ -680,22 +698,23 @@ def main():
|
|
| 680 |
else:
|
| 681 |
# Welcome message
|
| 682 |
st.markdown("""
|
| 683 |
-
## π Welcome to the
|
| 684 |
|
| 685 |
-
This system now
|
| 686 |
|
| 687 |
-
###
|
| 688 |
-
- **
|
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-
- **
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-
- **
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-
- **
|
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-
###
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- **
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- **
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- **
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**
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""")
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# Medical disclaimer
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| 129 |
'conv_layers': [],
|
| 130 |
'dense_layers': [],
|
| 131 |
'other_layers': [],
|
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+
'all_layers_detailed': [],
|
| 133 |
'model_type': 'Unknown'
|
| 134 |
}
|
| 135 |
|
| 136 |
for i, layer in enumerate(model.layers):
|
| 137 |
layer_type = type(layer).__name__
|
| 138 |
+
|
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+
# Get more detailed layer information
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| 140 |
layer_info = {
|
| 141 |
'index': i,
|
| 142 |
'name': layer.name,
|
| 143 |
'type': layer_type,
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| 144 |
+
'output_shape': getattr(layer, 'output_shape', 'Unknown'),
|
| 145 |
+
'trainable': getattr(layer, 'trainable', 'Unknown'),
|
| 146 |
+
'activation': getattr(layer, 'activation', None)
|
| 147 |
}
|
| 148 |
|
| 149 |
+
# Try to get activation function name
|
| 150 |
+
if hasattr(layer, 'activation') and layer.activation:
|
| 151 |
+
try:
|
| 152 |
+
layer_info['activation'] = layer.activation.__name__
|
| 153 |
+
except:
|
| 154 |
+
layer_info['activation'] = str(layer.activation)
|
| 155 |
+
|
| 156 |
+
layer_analysis['all_layers_detailed'].append(layer_info)
|
| 157 |
+
|
| 158 |
+
# Categorize layers with more comprehensive detection
|
| 159 |
if any(conv_type in layer_type for conv_type in [
|
| 160 |
'Conv1D', 'Conv2D', 'Conv3D', 'SeparableConv2D', 'DepthwiseConv2D',
|
| 161 |
'Convolution1D', 'Convolution2D', 'Convolution3D'
|
| 162 |
+
]) or 'conv' in layer.name.lower():
|
| 163 |
layer_analysis['conv_layers'].append(layer_info)
|
|
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|
| 164 |
|
| 165 |
elif 'Dense' in layer_type or 'Linear' in layer_type:
|
| 166 |
layer_analysis['dense_layers'].append(layer_info)
|
| 167 |
|
| 168 |
+
else:
|
|
|
|
|
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|
| 169 |
layer_analysis['other_layers'].append(layer_info)
|
|
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|
| 170 |
|
| 171 |
# Determine model type
|
| 172 |
if layer_analysis['conv_layers']:
|
|
|
|
| 178 |
|
| 179 |
return layer_analysis
|
| 180 |
|
| 181 |
+
def debug_gradcam_step_by_step(img_array, model, layer_name, pred_index):
|
| 182 |
+
"""Debug Grad-CAM computation step by step."""
|
| 183 |
+
debug_info = {
|
| 184 |
+
'step': 'Starting',
|
| 185 |
+
'error': None,
|
| 186 |
+
'layer_output_shape': None,
|
| 187 |
+
'gradients_shape': None,
|
| 188 |
+
'gradients_stats': None,
|
| 189 |
+
'heatmap_stats': None
|
| 190 |
+
}
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
| 191 |
|
|
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|
|
|
|
| 192 |
try:
|
| 193 |
+
debug_info['step'] = 'Getting target layer'
|
| 194 |
target_layer = model.get_layer(layer_name)
|
| 195 |
+
debug_info['target_layer_type'] = type(target_layer).__name__
|
| 196 |
|
| 197 |
+
debug_info['step'] = 'Creating grad model'
|
| 198 |
grad_model = tf.keras.Model(
|
| 199 |
inputs=[model.inputs],
|
| 200 |
outputs=[target_layer.output, model.output]
|
| 201 |
)
|
| 202 |
|
| 203 |
+
debug_info['step'] = 'Computing forward pass'
|
| 204 |
with tf.GradientTape() as tape:
|
| 205 |
layer_output, preds = grad_model(img_array)
|
| 206 |
+
debug_info['layer_output_shape'] = layer_output.shape.as_list()
|
| 207 |
+
debug_info['predictions_shape'] = preds.shape.as_list()
|
| 208 |
+
|
| 209 |
if pred_index is None:
|
| 210 |
pred_index = tf.argmax(preds[0])
|
| 211 |
+
debug_info['pred_index'] = int(pred_index)
|
| 212 |
+
debug_info['pred_confidence'] = float(preds[0][pred_index])
|
| 213 |
+
|
| 214 |
class_channel = preds[:, pred_index]
|
| 215 |
+
debug_info['class_channel_shape'] = class_channel.shape.as_list()
|
| 216 |
|
| 217 |
+
debug_info['step'] = 'Computing gradients'
|
| 218 |
grads = tape.gradient(class_channel, layer_output)
|
| 219 |
|
| 220 |
if grads is None:
|
| 221 |
+
debug_info['error'] = "Gradients are None - no backpropagation path"
|
| 222 |
+
return None, debug_info
|
| 223 |
+
|
| 224 |
+
debug_info['gradients_shape'] = grads.shape.as_list()
|
| 225 |
+
debug_info['gradients_stats'] = {
|
| 226 |
+
'min': float(tf.reduce_min(grads)),
|
| 227 |
+
'max': float(tf.reduce_max(grads)),
|
| 228 |
+
'mean': float(tf.reduce_mean(grads)),
|
| 229 |
+
'std': float(tf.math.reduce_std(grads))
|
| 230 |
+
}
|
| 231 |
|
| 232 |
+
debug_info['step'] = 'Processing gradients based on layer type'
|
| 233 |
+
|
| 234 |
+
if len(layer_output.shape) == 4: # Conv layer
|
| 235 |
+
debug_info['processing_type'] = 'Convolutional layer (4D)'
|
| 236 |
pooled_grads = tf.reduce_mean(grads, axis=(0, 1, 2))
|
| 237 |
layer_output = layer_output[0]
|
| 238 |
heatmap = layer_output @ pooled_grads[..., tf.newaxis]
|
| 239 |
heatmap = tf.squeeze(heatmap)
|
| 240 |
+
|
| 241 |
+
elif len(layer_output.shape) == 2: # Dense layer
|
| 242 |
+
debug_info['processing_type'] = 'Dense layer (2D)'
|
| 243 |
+
# For dense layers, create spatial heatmap from gradient magnitude
|
| 244 |
+
grads_magnitude = tf.reduce_mean(tf.abs(grads))
|
| 245 |
+
# Create a simple spatial pattern
|
| 246 |
+
heatmap = tf.ones((14, 14)) * grads_magnitude
|
| 247 |
+
|
| 248 |
else:
|
| 249 |
+
debug_info['error'] = f"Unsupported layer shape: {layer_output.shape}"
|
| 250 |
+
return None, debug_info
|
| 251 |
+
|
| 252 |
+
debug_info['step'] = 'Normalizing heatmap'
|
| 253 |
+
debug_info['raw_heatmap_stats'] = {
|
| 254 |
+
'min': float(tf.reduce_min(heatmap)),
|
| 255 |
+
'max': float(tf.reduce_max(heatmap)),
|
| 256 |
+
'mean': float(tf.reduce_mean(heatmap)),
|
| 257 |
+
'std': float(tf.math.reduce_std(heatmap))
|
| 258 |
+
}
|
| 259 |
|
| 260 |
+
# Apply ReLU (remove negative values)
|
| 261 |
heatmap = tf.maximum(heatmap, 0)
|
|
|
|
|
|
|
| 262 |
|
| 263 |
+
# Normalize
|
| 264 |
+
heatmap_max = tf.reduce_max(heatmap)
|
| 265 |
+
if heatmap_max > 0:
|
| 266 |
+
heatmap = heatmap / heatmap_max
|
| 267 |
+
else:
|
| 268 |
+
debug_info['error'] = "All heatmap values are zero or negative"
|
| 269 |
+
return None, debug_info
|
| 270 |
+
|
| 271 |
+
debug_info['final_heatmap_stats'] = {
|
| 272 |
+
'min': float(tf.reduce_min(heatmap)),
|
| 273 |
+
'max': float(tf.reduce_max(heatmap)),
|
| 274 |
+
'mean': float(tf.reduce_mean(heatmap)),
|
| 275 |
+
'std': float(tf.math.reduce_std(heatmap))
|
| 276 |
+
}
|
| 277 |
+
|
| 278 |
+
debug_info['step'] = 'Complete'
|
| 279 |
+
return heatmap.numpy(), debug_info
|
| 280 |
|
| 281 |
except Exception as e:
|
| 282 |
+
debug_info['error'] = f"Exception in step '{debug_info['step']}': {str(e)}"
|
| 283 |
+
return None, debug_info
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 284 |
|
| 285 |
+
def create_robust_gradcam_heatmap(img, model, predictions):
|
| 286 |
+
"""Create Grad-CAM with comprehensive debugging."""
|
| 287 |
try:
|
| 288 |
# Preprocess image
|
| 289 |
img_resized = img.resize((224, 224))
|
|
|
|
| 296 |
# Normalize and add batch dimension
|
| 297 |
img_array = np.expand_dims(img_array, axis=0) / 255.0
|
| 298 |
|
| 299 |
+
# Get model analysis
|
| 300 |
+
analysis = analyze_model_architecture(model)
|
| 301 |
|
| 302 |
+
# Try different layers in order of preference
|
| 303 |
+
layer_candidates = []
|
| 304 |
|
| 305 |
+
# Add conv layers first
|
| 306 |
+
for layer in analysis['conv_layers']:
|
| 307 |
+
layer_candidates.append((layer['name'], f"Conv layer: {layer['name']}"))
|
|
|
|
|
|
|
|
|
|
|
|
|
| 308 |
|
| 309 |
+
# Add other potentially suitable layers
|
| 310 |
+
for layer in analysis['all_layers_detailed']:
|
| 311 |
+
if (layer['type'] in ['Activation', 'BatchNormalization'] and
|
| 312 |
+
isinstance(layer['output_shape'], (list, tuple)) and
|
| 313 |
+
len(layer['output_shape']) == 4):
|
| 314 |
+
layer_candidates.append((layer['name'], f"4D layer: {layer['name']} ({layer['type']})"))
|
| 315 |
|
| 316 |
+
# Try dense layers as last resort
|
| 317 |
+
if not layer_candidates:
|
| 318 |
+
for layer in analysis['dense_layers']:
|
| 319 |
+
layer_candidates.append((layer['name'], f"Dense layer: {layer['name']} (experimental)"))
|
| 320 |
+
|
| 321 |
+
if not layer_candidates:
|
| 322 |
+
return None, "β No suitable layers found", None
|
| 323 |
+
|
| 324 |
+
# Try each candidate layer
|
| 325 |
+
for layer_name, layer_desc in layer_candidates:
|
| 326 |
+
pred_index = np.argmax(predictions)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 327 |
|
| 328 |
+
heatmap, debug_info = debug_gradcam_step_by_step(
|
| 329 |
+
img_array, model, layer_name, pred_index
|
| 330 |
+
)
|
| 331 |
|
| 332 |
+
if heatmap is not None:
|
| 333 |
+
# Resize heatmap to match input image size
|
| 334 |
+
if heatmap.shape[0] != 224 or heatmap.shape[1] != 224:
|
| 335 |
+
heatmap_resized = tf.image.resize(
|
| 336 |
+
heatmap[..., tf.newaxis],
|
| 337 |
+
(224, 224)
|
| 338 |
+
).numpy()[:, :, 0]
|
| 339 |
+
else:
|
| 340 |
+
heatmap_resized = heatmap
|
| 341 |
+
|
| 342 |
+
# Final statistics
|
| 343 |
+
stats = {
|
| 344 |
+
'min': float(np.min(heatmap_resized)),
|
| 345 |
+
'max': float(np.max(heatmap_resized)),
|
| 346 |
+
'mean': float(np.mean(heatmap_resized)),
|
| 347 |
+
'std': float(np.std(heatmap_resized))
|
| 348 |
+
}
|
| 349 |
+
|
| 350 |
+
return heatmap_resized, f"β
Grad-CAM successful using {layer_desc}", stats, debug_info
|
| 351 |
+
else:
|
| 352 |
+
# Continue to next layer if this one failed
|
| 353 |
+
continue
|
| 354 |
+
|
| 355 |
+
# If all layers failed, return debug info from the last attempt
|
| 356 |
+
return None, f"β All layers failed. Last error: {debug_info.get('error', 'Unknown')}", None, debug_info
|
| 357 |
+
|
| 358 |
except Exception as e:
|
| 359 |
+
return None, f"β Grad-CAM error: {str(e)}", None, {'error': str(e)}
|
| 360 |
|
| 361 |
def predict_stroke(img, model):
|
| 362 |
"""Predict stroke type from image."""
|
|
|
|
| 383 |
except Exception as e:
|
| 384 |
return None, f"Prediction error: {str(e)}"
|
| 385 |
|
| 386 |
+
def create_enhanced_simulated_heatmap(img, predictions):
|
| 387 |
+
"""Create a more realistic simulated heatmap."""
|
| 388 |
try:
|
| 389 |
confidence = np.max(predictions)
|
| 390 |
+
predicted_class = np.argmax(predictions)
|
| 391 |
+
|
| 392 |
+
# Create different patterns based on predicted class
|
| 393 |
+
if predicted_class == 0: # Hemorrhagic
|
| 394 |
+
# Focus on center-left region
|
| 395 |
+
center_x, center_y = 80, 112
|
| 396 |
+
elif predicted_class == 1: # Ischemic
|
| 397 |
+
# Focus on right side
|
| 398 |
+
center_x, center_y = 150, 112
|
| 399 |
+
else: # No stroke
|
| 400 |
+
# Diffuse, low-intensity pattern
|
| 401 |
center_x, center_y = 112, 112
|
|
|
|
|
|
|
|
|
|
| 402 |
|
| 403 |
+
# Create base pattern
|
| 404 |
+
y, x = np.ogrid[:224, :224]
|
| 405 |
+
|
| 406 |
+
# Primary focus area
|
| 407 |
+
mask1 = np.exp(-((x - center_x)**2 + (y - center_y)**2) / (2 * (40**2)))
|
| 408 |
+
|
| 409 |
+
# Secondary areas
|
| 410 |
+
mask2 = np.exp(-((x - center_x + 30)**2 + (y - center_y + 20)**2) / (2 * (25**2)))
|
| 411 |
+
mask3 = np.exp(-((x - center_x - 20)**2 + (y - center_y - 30)**2) / (2 * (30**2)))
|
| 412 |
+
|
| 413 |
+
# Combine patterns
|
| 414 |
+
heatmap = (mask1 * 0.8 + mask2 * 0.4 + mask3 * 0.3) * confidence
|
| 415 |
+
|
| 416 |
+
# Add some noise for realism
|
| 417 |
+
np.random.seed(42)
|
| 418 |
+
noise = np.random.normal(0, 0.05, heatmap.shape)
|
| 419 |
+
heatmap = np.maximum(heatmap + noise, 0)
|
| 420 |
+
|
| 421 |
+
# Normalize
|
| 422 |
+
if np.max(heatmap) > 0:
|
| 423 |
+
heatmap = heatmap / np.max(heatmap)
|
| 424 |
|
| 425 |
stats = {
|
| 426 |
+
'min': float(np.min(heatmap)),
|
| 427 |
+
'max': float(np.max(heatmap)),
|
| 428 |
+
'mean': float(np.mean(heatmap)),
|
| 429 |
+
'std': float(np.std(heatmap))
|
| 430 |
}
|
| 431 |
|
| 432 |
+
return heatmap, "β οΈ Using enhanced simulated heatmap", stats
|
| 433 |
except Exception as e:
|
| 434 |
return None, f"β Simulated heatmap error: {str(e)}", None
|
| 435 |
|
| 436 |
+
def create_comprehensive_visualization(img, predictions, model, force_gradcam=True, colormap='hot'):
|
| 437 |
+
"""Create comprehensive visualization with debugging."""
|
| 438 |
if not MPL_AVAILABLE:
|
| 439 |
return None, "β Matplotlib not available"
|
| 440 |
|
|
|
|
| 446 |
heatmap = None
|
| 447 |
status_message = ""
|
| 448 |
stats = None
|
| 449 |
+
debug_info = None
|
| 450 |
|
| 451 |
# Try Grad-CAM first
|
| 452 |
if force_gradcam and model is not None:
|
| 453 |
+
result = create_robust_gradcam_heatmap(img, model, predictions)
|
| 454 |
+
if result and len(result) >= 3:
|
| 455 |
+
heatmap, gradcam_status, stats = result[0], result[1], result[2]
|
| 456 |
+
if len(result) > 3:
|
| 457 |
+
debug_info = result[3]
|
| 458 |
status_message = gradcam_status
|
| 459 |
|
| 460 |
+
# Fallback to enhanced simulated if Grad-CAM failed
|
| 461 |
if heatmap is None:
|
| 462 |
+
result = create_enhanced_simulated_heatmap(img, predictions)
|
| 463 |
if result and len(result) == 3:
|
| 464 |
heatmap, sim_status, stats = result
|
| 465 |
if status_message:
|
|
|
|
| 468 |
status_message = sim_status
|
| 469 |
|
| 470 |
if heatmap is None:
|
| 471 |
+
return None, "β Could not generate any heatmap", None, None
|
| 472 |
|
| 473 |
+
# Create visualization
|
| 474 |
fig, axes = plt.subplots(1, 3, figsize=(15, 5))
|
| 475 |
|
| 476 |
# 1. Original image
|
|
|
|
| 478 |
axes[0].set_title("Original Image", fontsize=12, fontweight='bold')
|
| 479 |
axes[0].axis('off')
|
| 480 |
|
| 481 |
+
# 2. Heatmap only
|
| 482 |
im1 = axes[1].imshow(heatmap, cmap=colormap, vmin=0, vmax=1)
|
| 483 |
axes[1].set_title(f"Attention Heatmap ({colormap})", fontsize=12, fontweight='bold')
|
| 484 |
axes[1].axis('off')
|
| 485 |
plt.colorbar(im1, ax=axes[1], fraction=0.046, pad=0.04)
|
| 486 |
|
| 487 |
+
# 3. Overlay
|
| 488 |
axes[2].imshow(img_array)
|
| 489 |
im2 = axes[2].imshow(heatmap, cmap=colormap, alpha=0.6, vmin=0, vmax=1, interpolation='bilinear')
|
| 490 |
|
|
|
|
| 502 |
|
| 503 |
plt.tight_layout()
|
| 504 |
|
| 505 |
+
return fig, status_message, stats, debug_info
|
| 506 |
|
| 507 |
except Exception as e:
|
| 508 |
+
return None, f"β Visualization error: {str(e)}", None, None
|
| 509 |
|
| 510 |
# Main App
|
| 511 |
def main():
|
|
|
|
| 546 |
|
| 547 |
# Enhanced model architecture analysis
|
| 548 |
if st.session_state.model is not None:
|
| 549 |
+
with st.expander("π Detailed Model Architecture Analysis"):
|
| 550 |
analysis = analyze_model_architecture(st.session_state.model)
|
| 551 |
|
| 552 |
st.write("**π Model Summary:**")
|
|
|
|
| 556 |
st.write(f"- **Dense Layers:** {len(analysis['dense_layers'])}")
|
| 557 |
st.write(f"- **Other Layers:** {len(analysis['other_layers'])}")
|
| 558 |
|
| 559 |
+
# Show detailed layer information
|
| 560 |
+
st.write("**π All Layers (Detailed):**")
|
| 561 |
+
for layer in analysis['all_layers_detailed']:
|
| 562 |
+
activation_info = f" | Activation: {layer['activation']}" if layer['activation'] else ""
|
| 563 |
+
st.code(f"{layer['index']:2d}: {layer['name']} ({layer['type']}) | Shape: {layer['output_shape']}{activation_info}")
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 564 |
|
| 565 |
# Manual reload button
|
| 566 |
if st.button("π Reload Model", help="Try to reload the model"):
|
|
|
|
| 582 |
force_gradcam = st.checkbox(
|
| 583 |
"Attempt Grad-CAM",
|
| 584 |
value=True,
|
| 585 |
+
help="Try Grad-CAM with comprehensive debugging"
|
| 586 |
)
|
| 587 |
|
| 588 |
colormap = st.selectbox(
|
|
|
|
| 595 |
show_probabilities = st.checkbox("Show All Probabilities", value=True)
|
| 596 |
show_debug = st.checkbox("Show Debug Info", value=True)
|
| 597 |
show_stats = st.checkbox("Show Heatmap Statistics", value=True)
|
| 598 |
+
show_detailed_debug = st.checkbox("Show Detailed Debug Info", value=False)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 599 |
|
| 600 |
if uploaded_file is not None:
|
| 601 |
# Load image
|
|
|
|
| 637 |
st.error("β Model not loaded. Check the debug information above to see available files.")
|
| 638 |
|
| 639 |
with col2:
|
| 640 |
+
st.subheader("π― Comprehensive AI Attention Visualization")
|
| 641 |
|
| 642 |
if st.session_state.model is not None and 'predictions' in locals() and predictions is not None:
|
| 643 |
+
# Create comprehensive visualization
|
| 644 |
+
with st.spinner("π¨ Generating comprehensive attention visualization..."):
|
| 645 |
+
result = create_comprehensive_visualization(
|
| 646 |
image,
|
| 647 |
predictions,
|
| 648 |
st.session_state.model,
|
|
|
|
| 653 |
if result and len(result) >= 2:
|
| 654 |
overlay_fig, status_message = result[0], result[1]
|
| 655 |
stats = result[2] if len(result) > 2 else None
|
| 656 |
+
debug_info = result[3] if len(result) > 3 else None
|
| 657 |
|
| 658 |
if overlay_fig is not None:
|
| 659 |
st.pyplot(overlay_fig)
|
|
|
|
| 666 |
elif "β οΈ" in status_message:
|
| 667 |
st.warning(f"β οΈ {status_message}")
|
| 668 |
else:
|
| 669 |
+
st.error(f"β {status_message}")
|
| 670 |
|
| 671 |
# Show heatmap statistics
|
| 672 |
if show_stats and stats:
|
| 673 |
st.write("**π Heatmap Statistics:**")
|
| 674 |
+
if any(np.isnan([stats['min'], stats['max'], stats['mean'], stats['std']])):
|
| 675 |
+
st.error("β οΈ NaN values detected in heatmap - this indicates a computation error")
|
| 676 |
+
else:
|
| 677 |
+
col_stats1, col_stats2 = st.columns(2)
|
| 678 |
+
with col_stats1:
|
| 679 |
+
st.write(f"β’ Min: {stats['min']:.3f}")
|
| 680 |
+
st.write(f"β’ Max: {stats['max']:.3f}")
|
| 681 |
+
with col_stats2:
|
| 682 |
+
st.write(f"β’ Mean: {stats['mean']:.3f}")
|
| 683 |
+
st.write(f"β’ Std: {stats['std']:.3f}")
|
| 684 |
+
|
| 685 |
+
# Show detailed debug information
|
| 686 |
+
if show_detailed_debug and debug_info:
|
| 687 |
+
with st.expander("π§ Detailed Debug Information"):
|
| 688 |
+
st.json(debug_info)
|
| 689 |
else:
|
| 690 |
st.error(f"Could not generate visualization: {status_message}")
|
| 691 |
+
if debug_info:
|
| 692 |
+
st.error(f"Debug info: {debug_info.get('error', 'No additional info')}")
|
| 693 |
else:
|
| 694 |
st.error("Could not generate attention visualization")
|
| 695 |
else:
|
|
|
|
| 698 |
else:
|
| 699 |
# Welcome message
|
| 700 |
st.markdown("""
|
| 701 |
+
## π Welcome to the Comprehensive Stroke Classification System
|
| 702 |
|
| 703 |
+
This system now includes **step-by-step debugging** to identify why Grad-CAM might be failing.
|
| 704 |
|
| 705 |
+
### π§ New Debugging Features:
|
| 706 |
+
- **Step-by-step Grad-CAM debugging** - See exactly where it fails
|
| 707 |
+
- **Multiple layer attempts** - Tries different layers automatically
|
| 708 |
+
- **Enhanced error messages** - Clear explanations of what went wrong
|
| 709 |
+
- **NaN detection** - Identifies computation errors
|
| 710 |
|
| 711 |
+
### π― What to Look For:
|
| 712 |
+
- **Green success messages** - Grad-CAM is working
|
| 713 |
+
- **Orange warnings** - Using fallback methods
|
| 714 |
+
- **Red errors** - Something is broken
|
| 715 |
+
- **NaN statistics** - Computation failure
|
| 716 |
|
| 717 |
+
**Upload an image to see detailed debugging! π**
|
| 718 |
""")
|
| 719 |
|
| 720 |
# Medical disclaimer
|