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| """ScrubData — gr.Server backend with a custom HTML frontend (Off-Brand quest). | |
| Exposes a single JSON API (`clean_data`) that runs the real ScrubData pipeline | |
| (profile -> plan -> execute -> report) on an uploaded CSV/Excel file, plus a `/` | |
| route serving the custom frontend. The cleaning engine lives in `scrubdata` and is | |
| imported, not reimplemented. | |
| Run: uv run python server.py (only then is the server launched) | |
| Deps: gradio (already a dependency), pandas, fastapi (pulled in by gradio). | |
| """ | |
| from __future__ import annotations | |
| import difflib | |
| import io | |
| import re | |
| import time | |
| from pathlib import Path | |
| import gradio as gr | |
| import pandas as pd | |
| from fastapi.responses import HTMLResponse | |
| from fastapi.staticfiles import StaticFiles | |
| from scrubdata import apply_plan, mock_plan, profile_dataframe, render_report | |
| from scrubdata.active import get_planner | |
| # Two planners, picked per-request: the deterministic heuristic is the FAST default | |
| # (~0.6s, no GPU); the model planner (the 4B fine-tune, served on a Modal GPU when | |
| # SCRUBDATA_OLLAMA_HOST is set) is opt-in because the heavy profile prompt makes it | |
| # ~90s/clean. get_planner() returns the model-backed pipeline when a model is | |
| # configured, else mock_plan — so MODEL_PLANNER is None unless a model is wired. | |
| import os as _os | |
| MODEL_PLANNER = get_planner() if _os.environ.get("SCRUBDATA_MODEL") else None | |
| PLANNER = mock_plan # default fast path; clean_data opts into MODEL_PLANNER per request | |
| HERE = Path(__file__).parent | |
| FRONTEND_INDEX = HERE / "frontend" / "index.html" | |
| SAMPLES_DIR = HERE / "samples" | |
| ROW_CAP = 50 # rows returned to the UI for the before/after preview | |
| app = gr.Server() | |
| # Serve the bundled sample datasets so the frontend's "load sample" action can | |
| # reach `samples/dirty_contacts.csv` (handle_file resolves it against origin). | |
| if SAMPLES_DIR.is_dir(): | |
| app.mount("/samples", StaticFiles(directory=str(SAMPLES_DIR)), name="samples") | |
| def _coerce_path(file_path) -> str | None: | |
| """Normalize the incoming file arg to a local path string. | |
| Depending on how the request is made, Gradio hands us either a bare path | |
| string or a FileData object/dict (``{"path": ..., "url": ...}``). Accept | |
| both so the API is robust to the JS client, the Python client, and direct | |
| calls. | |
| """ | |
| if file_path is None: | |
| return None | |
| if isinstance(file_path, str): | |
| return file_path or None | |
| if isinstance(file_path, dict): | |
| return file_path.get("path") or file_path.get("name") or None | |
| # FileData-like object with a `.path` attribute | |
| path = getattr(file_path, "path", None) | |
| return path or None | |
| def _sanitize_columns(df: pd.DataFrame) -> pd.DataFrame: | |
| """Real-world exports arrive with duplicate headers, blank headers, or no header | |
| row at all (numeric column labels). The engine addresses columns by unique string | |
| name, so repair them at ingestion: stringify, fill blanks as column_N, and | |
| de-duplicate with .1/.2 suffixes. Demo-safety — a messy header must never crash.""" | |
| seen: dict[str, int] = {} | |
| new_cols = [] | |
| for i, c in enumerate(df.columns): | |
| base = str(c).strip() | |
| if not base or base.lower() == "nan" or str(c).startswith("Unnamed"): | |
| base = f"column_{i + 1}" | |
| name = base | |
| suffix = seen.get(base, 0) | |
| while name in seen: | |
| suffix += 1 | |
| name = f"{base}.{suffix}" | |
| seen[base] = suffix | |
| seen[name] = 0 | |
| new_cols.append(name) | |
| df.columns = new_cols | |
| return df | |
| def _read_any(path: str) -> pd.DataFrame: | |
| """Read CSV or Excel as raw strings — cleaning decides the real types.""" | |
| p = Path(path) | |
| if p.suffix.lower() in {".xlsx", ".xls"}: | |
| df = pd.read_excel(p, dtype=str) | |
| else: | |
| try: | |
| df = pd.read_csv(p, dtype=str, keep_default_na=False) | |
| except UnicodeDecodeError: # non-UTF-8 export (Excel often emits cp1252) | |
| df = pd.read_csv(p, dtype=str, keep_default_na=False, encoding="latin-1") | |
| return _sanitize_columns(df) | |
| def _records(df: pd.DataFrame, cap: int = ROW_CAP) -> list[dict]: | |
| """First `cap` rows as JSON-safe row dicts (NaN/NA -> None).""" | |
| head = df.head(cap) | |
| # object-dtype the frame so .where can place None without re-casting issues, | |
| # then replace any pandas NA/NaN with None for valid JSON. | |
| safe = head.astype(object).where(pd.notna(head), None) | |
| return safe.to_dict(orient="records") | |
| _WS = re.compile(r"\s+") | |
| def _row_signature(rec: dict) -> str: | |
| """A transform-tolerant signature for one row. | |
| The engine drops rows (empty/dedup) and *then* normalizes cell values | |
| (trim, lowercase email, canonicalize categories, reformat phone/date...). | |
| Naive index pairing therefore mis-aligns every row after the first drop. | |
| We instead align before/after rows with difflib over a normalized signature | |
| that survives those value-level transforms: lowercase, collapse whitespace, | |
| keep only alphanumerics. Alignment happens here (server-side, on the full | |
| data) so the UI reflects real row identity rather than re-deriving it. | |
| """ | |
| parts = [] | |
| for v in rec.values(): | |
| s = "" if v is None else str(v) | |
| s = _WS.sub(" ", s).strip().lower() | |
| s = re.sub(r"[^a-z0-9]+", "", s) | |
| parts.append(s) | |
| return "\x1f".join(parts) | |
| def _align_rows(before: list[dict], after: list[dict]) -> list[dict]: | |
| """Pair before/after preview rows by content identity, not by index. | |
| Returns a list of alignment ops, each: | |
| {"type": "pair", "b": <before idx>, "a": <after idx>} | |
| {"type": "removed", "b": <before idx>} | |
| {"type": "added", "a": <after idx>} | |
| `after` is (post-transform) an in-order subsequence of `before`, so a | |
| sequence alignment over normalized signatures recovers the true mapping | |
| and isolates dropped rows instead of smearing "changed" across the table. | |
| """ | |
| bsig = [_row_signature(r) for r in before] | |
| asig = [_row_signature(r) for r in after] | |
| sm = difflib.SequenceMatcher(a=bsig, b=asig, autojunk=False) | |
| ops: list[dict] = [] | |
| for tag, i1, i2, j1, j2 in sm.get_opcodes(): | |
| if tag == "equal": | |
| for off in range(i2 - i1): | |
| ops.append({"type": "pair", "b": i1 + off, "a": j1 + off}) | |
| elif tag == "replace": | |
| # A "replace" block is a run of before-rows with no exact signature | |
| # match among a run of after-rows. Pairing them blindly (by index) | |
| # reintroduces the smear we're avoiding — a dropped empty/garbage row | |
| # paired against an unrelated kept row floods the diff with false | |
| # "changed" cells. Only pair rows whose signatures are *similar* | |
| # (same row, value-level transforms); leave the rest removed/added. | |
| ops.extend(_align_block(bsig, asig, i1, i2, j1, j2)) | |
| elif tag == "delete": | |
| for off in range(i2 - i1): | |
| ops.append({"type": "removed", "b": i1 + off}) | |
| elif tag == "insert": | |
| for off in range(j2 - j1): | |
| ops.append({"type": "added", "a": j1 + off}) | |
| return _reconcile(ops, bsig, asig) | |
| def _reconcile(ops: list[dict], bsig, asig, thresh: float = 0.74) -> list[dict]: | |
| """Re-pair `removed`/`added` rows that block boundaries split apart. | |
| Duplicate-collapse can leave a genuine survivor labelled `removed` on one | |
| side and `added` on the other (an off-by-N at a block edge). Walk the ops in | |
| order and, whenever a removed row is followed later by a sufficiently similar | |
| added row (no intervening pair crossing them), merge the two into one pair so | |
| the row shows as a single, correctly-aligned change rather than remove+add. | |
| """ | |
| rem_idx = [k for k, o in enumerate(ops) if o["type"] == "removed"] | |
| add_idx = [k for k, o in enumerate(ops) if o["type"] == "added"] | |
| used_rem: set[int] = set() | |
| for ak in add_idx: | |
| aj = ops[ak]["a"] | |
| best_rk, best_r = -1, thresh | |
| for rk in rem_idx: | |
| if rk in used_rem: | |
| continue | |
| bi = ops[rk]["b"] | |
| r = difflib.SequenceMatcher(None, bsig[bi], asig[aj], autojunk=False).ratio() | |
| if r >= best_r: | |
| best_r, best_rk = r, rk | |
| if best_rk >= 0: | |
| used_rem.add(best_rk) | |
| ops[best_rk] = {"type": "pair", "b": ops[best_rk]["b"], "a": aj} | |
| ops[ak] = {"type": "_drop"} # tombstone; removed below | |
| return [o for o in ops if o["type"] != "_drop"] | |
| def _align_block(bsig, asig, i1, i2, j1, j2, thresh: float = 0.74) -> list[dict]: | |
| """Greedily, in order, pair before/after rows within one replace block. | |
| A before-row is paired to the next after-row only when their normalized | |
| signatures are similar enough (difflib ratio >= `thresh`); otherwise the | |
| before-row is `removed` and/or the after-row is `added`. Order-preserving, | |
| so it never crosses pairs. | |
| """ | |
| ops: list[dict] = [] | |
| i, j = i1, j1 | |
| while i < i2 and j < j2: | |
| ratio = difflib.SequenceMatcher(None, bsig[i], asig[j], autojunk=False).ratio() | |
| if ratio >= thresh: | |
| ops.append({"type": "pair", "b": i, "a": j}) | |
| i += 1 | |
| j += 1 | |
| else: | |
| # Decide whether this before-row was dropped or this after-row is new | |
| # by peeking one step ahead on each side. | |
| b_next = ( | |
| difflib.SequenceMatcher(None, bsig[i + 1], asig[j], autojunk=False).ratio() | |
| if i + 1 < i2 else -1.0 | |
| ) | |
| a_next = ( | |
| difflib.SequenceMatcher(None, bsig[i], asig[j + 1], autojunk=False).ratio() | |
| if j + 1 < j2 else -1.0 | |
| ) | |
| if a_next >= b_next: | |
| ops.append({"type": "added", "a": j}) | |
| j += 1 | |
| else: | |
| ops.append({"type": "removed", "b": i}) | |
| i += 1 | |
| while i < i2: | |
| ops.append({"type": "removed", "b": i}) | |
| i += 1 | |
| while j < j2: | |
| ops.append({"type": "added", "a": j}) | |
| j += 1 | |
| return ops | |
| def _empty_result(summary: str) -> dict: | |
| """The no-op / graceful-error response shape (frontend tolerates missing keys).""" | |
| return { | |
| "before": [], "after": [], "columns_before": [], "columns_after": [], | |
| "alignment": [], "change_log": [], "total_rows_before": 0, | |
| "total_rows_after": 0, "preview_cap": ROW_CAP, "report_md": "", | |
| "csv_text": "", "summary": summary, | |
| } | |
| def clean_data(file_path: str, use_model: bool = True) -> dict: | |
| """Run the full pipeline on an uploaded file and return a JSON-safe dict. | |
| `use_model` (default True) runs the 4B fine-tune when one is configured — the | |
| hackathon's whole point is the small model, so it's the default; the deterministic | |
| planner is the silent fallback when the model is cold/down/unconfigured. Pass | |
| use_model=False to force the fast deterministic-only path. | |
| `file_path` is a local path string or FileData (dict/object). Returns keys: | |
| before, after, columns_before, columns_after, alignment, change_log, | |
| total_rows_before, total_rows_after, preview_cap, report_md, csv_text, | |
| summary. | |
| """ | |
| file_path = _coerce_path(file_path) | |
| if not file_path: | |
| return _empty_result("No file provided. Upload a CSV or Excel file to begin.") | |
| try: | |
| raw = _read_any(file_path) | |
| except Exception as e: # noqa: BLE001 — never crash the demo on a malformed file | |
| return _empty_result( | |
| f"Couldn't read this file ({type(e).__name__}). " | |
| "Try exporting it as a CSV or .xlsx and dropping it again.") | |
| if raw is None or raw.empty or len(raw.columns) == 0: | |
| return _empty_result("That file looks empty — no rows or columns to clean.") | |
| try: | |
| _t0 = time.perf_counter() | |
| before_profile = profile_dataframe(raw) | |
| planner = MODEL_PLANNER if (use_model and MODEL_PLANNER is not None) else PLANNER | |
| plan = planner(raw) | |
| cleaned, change_log = apply_plan(raw, plan) | |
| elapsed_ms = int((time.perf_counter() - _t0) * 1000) | |
| after_profile = profile_dataframe(cleaned) | |
| report_md = render_report(plan, change_log, before_profile, after_profile) | |
| except Exception as e: # noqa: BLE001 — degrade gracefully, surface the original untouched | |
| return _empty_result( | |
| f"Something went wrong while cleaning ({type(e).__name__}) — your file is " | |
| "untouched. This is logged; please try another export.") | |
| return _build_response(raw, cleaned, plan, change_log, elapsed_ms, | |
| before_profile, report_md) | |
| def _build_response(raw, cleaned, plan, change_log, elapsed_ms, | |
| before_profile=None, report_md="") -> dict: | |
| """Assemble the JSON-safe response. Shared by clean_data (model/heuristic plan) | |
| and clean_with_plan (replay a saved recipe), so both render identically.""" | |
| try: # best-effort agent-trace capture (Open trace bonus quest) | |
| from scrubdata.trace import log_run | |
| if before_profile is not None: | |
| log_run(before_profile, raw, plan, change_log, | |
| model=plan.get("_generated_by", "mock_planner")) | |
| except Exception: # noqa: BLE001 | |
| pass | |
| buf = io.StringIO() | |
| cleaned.to_csv(buf, index=False) | |
| csv_text = buf.getvalue() | |
| n_changes = len(change_log) if change_log is not None else 0 | |
| summary = ( | |
| f"Cleaned {len(raw):,} rows × {len(raw.columns)} columns -> " | |
| f"{len(cleaned):,} rows × {len(cleaned.columns)} columns " | |
| f"({n_changes} change{'s' if n_changes != 1 else ''} applied)." | |
| ) | |
| before_records = _records(raw) | |
| after_records = _records(cleaned) | |
| return { | |
| "before": before_records, | |
| "after": after_records, | |
| "columns_before": list(raw.columns), | |
| "columns_after": list(cleaned.columns), | |
| # Content-based pairing of the *previewed* rows so the UI's diff reflects | |
| # real row identity (handles dropped/deduped rows without smearing). | |
| "alignment": _align_rows(before_records, after_records), | |
| "change_log": change_log if change_log is not None else [], | |
| # True dataset totals (the before/after arrays are capped previews). | |
| "total_rows_before": int(len(raw)), | |
| "total_rows_after": int(len(cleaned)), | |
| # scale-invariance demo beat: profile+plan+execute wall-clock. The prompt | |
| # scales with DISTINCT values not rows, so this stays low on big tables. | |
| "elapsed_ms": elapsed_ms, | |
| "preview_cap": ROW_CAP, | |
| "report_md": report_md, | |
| "csv_text": csv_text, | |
| "summary": summary, | |
| # structured plan for the card UI: applied ops, review flags, PII, audit signals | |
| "plan_columns": [ | |
| {"name": c.get("name"), "semantic_type": c.get("detected_semantic_type"), | |
| "operations": [ | |
| {"op": o.get("op"), "rationale": o.get("rationale", ""), | |
| "pii_type": o.get("pii_type"), | |
| "mapping_sample": dict(list(o.get("mapping", {}).items())[:6]) or None, | |
| "mapping_size": len(o.get("mapping", {})) or None} | |
| for o in c.get("operations", [])]} | |
| for c in plan.get("columns", [])], | |
| "flags": plan.get("flags", []), | |
| "monitor": _monitor(plan, change_log), | |
| # embedded-PII awareness (product-only, detection not edit): cards/SSNs buried | |
| # in free-text columns the column typer didn't flag. Surfaced for review. | |
| "pii_alerts": _embedded_pii_alerts(raw, plan), | |
| # the executable plan itself — the "cleaning recipe" the user can save and | |
| # re-apply to next month's same-shaped export via clean_with_plan. | |
| "plan_raw": plan, | |
| } | |
| def clean_with_plan(file_path: str, plan_json: str) -> dict: | |
| """Replay a SAVED recipe (plan JSON from a prior run) on a NEW file — the 'Monday | |
| ritual': same cleaning, next month's export, one click. No re-planning.""" | |
| import json as _json | |
| file_path = _coerce_path(file_path) | |
| if not file_path: | |
| return _empty_result("Upload the new file to apply your saved recipe to.") | |
| try: | |
| plan = _json.loads(plan_json) if isinstance(plan_json, str) else plan_json | |
| assert isinstance(plan, dict) and "columns" in plan | |
| except Exception: # noqa: BLE001 | |
| return _empty_result("That isn't a ScrubData recipe — expected the saved plan JSON.") | |
| try: | |
| raw = _read_any(file_path) | |
| except Exception as e: # noqa: BLE001 | |
| return _empty_result(f"Couldn't read the data file ({type(e).__name__}).") | |
| if raw is None or raw.empty or len(raw.columns) == 0: | |
| return _empty_result("That file looks empty.") | |
| try: | |
| _t0 = time.perf_counter() | |
| cleaned, change_log = apply_plan(raw, plan) | |
| elapsed_ms = int((time.perf_counter() - _t0) * 1000) | |
| report_md = "" | |
| try: | |
| report_md = render_report(plan, change_log, | |
| profile_dataframe(raw), profile_dataframe(cleaned)) | |
| except Exception: # noqa: BLE001 | |
| pass | |
| plan = {**plan, "_generated_by": "saved recipe (replay)"} | |
| return _build_response(raw, cleaned, plan, change_log, elapsed_ms, None, report_md) | |
| except Exception as e: # noqa: BLE001 | |
| return _empty_result( | |
| f"Couldn't apply the recipe to this file ({type(e).__name__}) — " | |
| "is it the same kind of export?") | |
| def _embedded_pii_alerts(raw, plan: dict) -> list[dict]: | |
| """Scan raw text columns (that the planner didn't already type as PII) for | |
| high-precision embedded cards/SSNs, so the UI can warn before the user shares.""" | |
| try: | |
| from scrubdata import pii | |
| typed = {c.get("name") for c in plan.get("columns", []) | |
| if any("pii" in (o.get("op") or "") for o in c.get("operations", []))} | |
| alerts = [] | |
| for col in raw.columns: | |
| if col in typed: | |
| continue | |
| a = pii.scan_embedded_pii(col, raw[col].tolist()) | |
| if a: | |
| alerts.append(a) | |
| return alerts | |
| except Exception: # noqa: BLE001 | |
| return [] | |
| def _monitor(plan: dict, change_log) -> dict: | |
| try: | |
| from scrubdata.observability import monitor_summary | |
| return monitor_summary(plan, change_log) | |
| except Exception: # noqa: BLE001 | |
| return {} | |
| _PLACEHOLDER_HTML = """<!doctype html> | |
| <html><head><meta charset="utf-8"><title>ScrubData</title></head> | |
| <body style="font-family:system-ui;max-width:42rem;margin:4rem auto;padding:0 1rem"> | |
| <h1>ScrubData</h1> | |
| <p>Backend is running. The custom frontend | |
| (<code>frontend/index.html</code>) hasn't been built yet — the Integrate step | |
| creates it. The <code>clean_data</code> API is live.</p> | |
| </body></html>""" | |
| def _runtime_info() -> dict: | |
| """Honest, deployment-aware facts the UI uses to label itself. On a hosted HF | |
| Space the file is processed on HF's servers (not on-device); only a self-hosted | |
| run is truly local. The planner is the fine-tune only if SCRUBDATA_MODEL is set; | |
| otherwise it's the deterministic heuristic (the default on the free Space).""" | |
| import os | |
| hosted = bool(os.environ.get("SPACE_ID")) | |
| return { | |
| "hosted": hosted, | |
| "private": not hosted, | |
| # the DEFAULT planner is the fast deterministic one; the 4B model is opt-in | |
| "planner": "deterministic planner", | |
| "model_available": MODEL_PLANNER is not None, | |
| "where": ("Hugging Face's servers" if hosted else "this machine"), | |
| } | |
| async def homepage() -> str: | |
| import json as _json | |
| try: | |
| html = FRONTEND_INDEX.read_text(encoding="utf-8") | |
| except (FileNotFoundError, OSError): | |
| return _PLACEHOLDER_HTML | |
| inject = f"<script>window.__SCRUBDATA_RUNTIME__ = {_json.dumps(_runtime_info())};</script>" | |
| return html.replace("</head>", inject + "\n</head>", 1) | |
| import threading as _threading | |
| _WARM = _threading.Event() # set when the index + sample caches are hot | |
| def ready() -> dict: | |
| """Is the deterministic path warm? The UI gates its run button on this so a judge's | |
| FIRST click can't land on a cold reference-index build (the 'instant' promise).""" | |
| return {"ready": _WARM.is_set()} | |
| def wake() -> dict: | |
| """Fire-and-forget: spin up the scale-to-zero Modal GPU container in the background | |
| so it's warm by the time the user uploads + clicks — hides the ~60s cold start since | |
| the model is now the default planner. Returns immediately.""" | |
| import os | |
| host = os.environ.get("SCRUBDATA_OLLAMA_HOST") | |
| if not host: | |
| return {"woke": False} | |
| def _ping(): | |
| try: | |
| import urllib.request | |
| urllib.request.urlopen(host.rstrip("/") + "/api/version", timeout=90).read() | |
| except Exception: # noqa: BLE001 | |
| pass | |
| _threading.Thread(target=_ping, daemon=True).start() | |
| return {"woke": True} | |
| def _warmup() -> None: | |
| """Pre-build the reference index (one-time ~5s) and pre-run the bundled samples so | |
| the demo's first click is warm (best()'s per-value cache is populated). Runs in a | |
| daemon thread at import so server boot is never blocked (HF Spaces boot timeout).""" | |
| try: | |
| from scrubdata.reconcile import default_index | |
| default_index() | |
| for s in sorted(SAMPLES_DIR.glob("*.csv")) if SAMPLES_DIR.is_dir() else []: | |
| try: | |
| df = _read_any(str(s)) | |
| apply_plan(df, PLANNER(df)) | |
| profile_dataframe(df) | |
| except Exception: # noqa: BLE001 — warmup must never crash the server | |
| pass | |
| except Exception: # noqa: BLE001 | |
| pass | |
| finally: | |
| _WARM.set() | |
| _threading.Thread(target=_warmup, daemon=True).start() | |
| if __name__ == "__main__": | |
| import os | |
| app.launch(server_name="0.0.0.0", | |
| server_port=int(os.environ.get("GRADIO_SERVER_PORT", 7860))) | |