Spaces:
Running on Zero
Running on Zero
update layout with embed4d viewer
Browse files- .gitattributes +1 -0
- README.md +1 -1
- app.py +218 -134
- data/5385885.mp4 +3 -0
- info_files/error.glb +3 -0
- info_files/processing.glb +3 -0
- info_files/upload_files.glb +3 -0
- requirements.txt +2 -1
.gitattributes
CHANGED
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@@ -6,6 +6,7 @@
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*.c3d filter=lfs diff=lfs merge=lfs -text
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*.ftz filter=lfs diff=lfs merge=lfs -text
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*.gz filter=lfs diff=lfs merge=lfs -text
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*.h5 filter=lfs diff=lfs merge=lfs -text
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*.joblib filter=lfs diff=lfs merge=lfs -text
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*.lfs.* filter=lfs diff=lfs merge=lfs -text
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*.c3d filter=lfs diff=lfs merge=lfs -text
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*.ftz filter=lfs diff=lfs merge=lfs -text
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*.gz filter=lfs diff=lfs merge=lfs -text
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+
*.glb filter=lfs diff=lfs merge=lfs -text
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*.h5 filter=lfs diff=lfs merge=lfs -text
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*.joblib filter=lfs diff=lfs merge=lfs -text
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*.lfs.* filter=lfs diff=lfs merge=lfs -text
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README.md
CHANGED
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@@ -1,6 +1,6 @@
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---
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title: Myosdk App
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-
emoji:
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colorFrom: green
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colorTo: gray
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sdk: gradio
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---
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title: Myosdk App
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+
emoji: π
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colorFrom: green
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colorTo: gray
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sdk: gradio
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app.py
CHANGED
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@@ -17,10 +17,13 @@ import time
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import cv2
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import gradio as gr
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import numpy as np
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import plotly.graph_objs as go
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import spaces
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import torch
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from metrabs_pytorch.scripts.run_video import run_metrabs_video
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from myo_tools.mjs.marker.marker_api import get_marker_names
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from myo_tools.utils.file_ops.dataframe_utils import from_array_to_dataframe
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@@ -38,6 +41,9 @@ PLOT_CONFIG = {
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DEVICE = "cuda" if torch.cuda.is_available() else "cpu"
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def draw_keypoints(frame, poses2d, radius=10):
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@@ -69,15 +75,6 @@ def save_video_with_keypoints(results, output_video):
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return output_video
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-
def load_all_videos():
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video_dir = os.path.join(os.path.dirname(__file__), "./data")
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return [
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os.path.abspath(os.path.join(video_dir, f))
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for f in os.listdir(video_dir)
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if f.lower().endswith((".mp4", ".avi", ".mov", ".mkv"))
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-
]
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-
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-
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def create_info_text(title, info_text):
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return f"""
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<div>
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@@ -157,7 +154,7 @@ def run_retargeting_c3d(api_key, c3d_files, markerset_file):
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None,
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gr.update(value=[], visible=True),
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gr.update(visible=False),
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-
gr.update(visible=
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)
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return
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@@ -168,7 +165,7 @@ def run_retargeting_c3d(api_key, c3d_files, markerset_file):
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None,
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gr.update(value=[], visible=True),
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gr.update(visible=False),
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-
gr.update(visible=
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)
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try:
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init_time = time.time()
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yield "\n".join(status), None, None, gr.update(visible=False), gr.update(
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visible=False
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-
), gr.update(visible=
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client = Client(api_key=api_key)
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status.append(
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@@ -188,7 +185,7 @@ def run_retargeting_c3d(api_key, c3d_files, markerset_file):
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status.append("πΉ Uploading markerset file...")
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yield "\n".join(status), None, None, gr.update(value=[]), gr.update(
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visible=False
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-
), gr.update(visible=
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mk_asset = client.assets.upload_file(markerset_file.name)
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status.append(
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)
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yield "\n".join(status), None, None, gr.update(value=[]), gr.update(
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visible=False
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-
), gr.update(visible=
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mk_id = mk_asset["asset_id"]
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@@ -209,7 +206,7 @@ def run_retargeting_c3d(api_key, c3d_files, markerset_file):
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yield "\n".join(status), None, None, gr.update(value=[]), gr.update(
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visible=False
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-
), gr.update(visible=
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init_time = time.time()
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tracker_asset = client.assets.upload_file(f)
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@@ -218,7 +215,7 @@ def run_retargeting_c3d(api_key, c3d_files, markerset_file):
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)
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yield "\n".join(status), None, None, gr.update(value=[]), gr.update(
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visible=False
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-
), gr.update(visible=
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init_time = time.time()
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job = client.jobs.start_retarget(
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tracker_asset_id=tracker_asset["asset_id"],
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@@ -231,16 +228,16 @@ def run_retargeting_c3d(api_key, c3d_files, markerset_file):
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)
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yield "\n".join(status), None, None, gr.update(value=[]), gr.update(
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visible=False
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-
), gr.update(visible=
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init_time = time.time()
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result = client.jobs.wait(job["job_id"])
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status.append(
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f"\tπΉ Retargeting job completed in {time.time() - init_time:.2f} seconds"
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-
)
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yield "\n".join(status), None, None, gr.update(value=[]), gr.update(
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visible=False
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-
), gr.update(visible=
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assert (
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result["status"] == "SUCCEEDED"
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), f"Failed retarget for {os.path.basename(f)}"
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@@ -271,21 +268,26 @@ def run_retargeting_c3d(api_key, c3d_files, markerset_file):
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time.sleep(0.1) # allow filesystem flush
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yield "\n".join(status), None, None, gr.update(
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interactive=True, visible=True
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-
), gr.update(visible=True), gr.update(
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-
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df = from_qpos_to_joint_angles(output_files[0])
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angle_list = list(df.columns[1:])
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initial_value = [angle_list[0]] if angle_list else []
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-
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status.append("β
Complete!")
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yield (
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"\n".join(status),
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gr.update(value=output_files, visible=True),
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-
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gr.update(
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-
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-
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)
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except Exception as e:
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@@ -295,7 +297,7 @@ def run_retargeting_c3d(api_key, c3d_files, markerset_file):
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None,
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gr.update(visible=False),
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gr.update(visible=False),
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-
gr.update(visible=
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)
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@@ -319,7 +321,7 @@ def run_retargeting_video(
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gr.update(visible=False),
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gr.update(visible=False),
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video_file,
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gr.update(visible=
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)
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return
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@@ -341,7 +343,7 @@ def run_retargeting_video(
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gr.update(visible=False),
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gr.update(visible=False),
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video_file,
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-
gr.update(visible=
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)
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return
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@@ -354,7 +356,7 @@ def run_retargeting_video(
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init_time = time.time()
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yield "\n".join(status), None, None, gr.update(visible=False), gr.update(
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visible=False
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-
), video_path, gr.update(visible=
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results = list(
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run_metrabs_video(video_path=video_path, device=DEVICE, visualize=False)
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@@ -363,6 +365,8 @@ def run_retargeting_video(
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np.array([res["poses3d"] for res in results]).squeeze()
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)
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fps = (
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results[0]["fps"] if results else 25.0
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) # Default to 25 fps if not available
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@@ -374,20 +378,26 @@ def run_retargeting_video(
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yield "\n".join(status), None, None, gr.update(visible=False), gr.update(
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visible=True
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-
), video_with_keypoints, gr.update(
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status.append(
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f"πΉ Pose Extraction from Video Completed in {time.time() - init_time:.2f} seconds with {len(markers)} frames extracted ({((time.time() - init_time)/len(markers)):.2f} seconds per frame)"
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)
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print("πΉ Pose Extraction from Video Completed")
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-
yield "\n".join(status), None, None,
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visible=False
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-
), video_with_keypoints, gr.update(
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# Initialize client
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status.append("πΉ Initializing MyoSDK client...")
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init_time = time.time()
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yield "\n".join(status), None, None, gr.update(visible=False), gr.update(
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visible=False,
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-
), video_with_keypoints, gr.update(
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client = Client(api_key=api_key)
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status.append(
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init_time = time.time()
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# Upload markerset
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status.append("πΉ Uploading markerset file...")
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-
yield "\n".join(status), None, None, gr.update(
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visible=False,
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-
), video_with_keypoints, gr.update(
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markerset_file_name = "markersets/movi_metrabs_markerset.xml"
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@@ -408,9 +420,11 @@ def run_retargeting_video(
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f"πΉ Markerset file uploaded in {time.time() - init_time:.2f} seconds"
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)
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-
yield "\n".join(status), None, None, gr.update(
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visible=False
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-
), video_with_keypoints, gr.update(
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init_time = time.time()
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marker_names = get_marker_names(markerset_file_name)
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)
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yield "\n".join(status), None, None, gr.update(value=[]), gr.update(
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visible=False
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-
), video_with_keypoints, gr.update(
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init_time = time.time()
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result = client.jobs.wait(job["job_id"])
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status.append(
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f"\tπΉ Retargeting job completed in {time.time() - init_time:.2f} seconds"
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)
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-
yield "\n".join(status), None, None, gr.update(
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visible=False
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-
), video_with_keypoints, gr.update(
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print("STATUS: ", result["status"])
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assert (
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result["output"]["retarget_output_asset_ids"]["motion"], output_glb_path
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)
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# Load angles from first output file
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status.append("πΉ Loading animation and angle data...")
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yield "\n".join(status), None, None, gr.update(
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-
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-
),
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visible=True, value=output_glb_path
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)
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-
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df = from_qpos_to_joint_angles(out_path)
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angle_list = list(df.columns[1:])
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initial_value = [angle_list[0]] if angle_list else []
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-
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status.append("β
Complete!")
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yield (
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"\n".join(status),
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gr.update(value=out_path, visible=True),
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-
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gr.update(
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-
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video_with_keypoints,
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gr.update(visible=True, value=output_glb_path),
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)
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except Exception as e:
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# Use video_path if defined, otherwise use video_file or None
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@@ -509,17 +534,41 @@ def run_retargeting_video(
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gr.update(visible=False),
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gr.update(visible=False),
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error_video,
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)
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# ------------------------------------------------------------
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# Plotting
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# ------------------------------------------------------------
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-
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-
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-
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if not joints:
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return go.Figure()
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if not isinstance(joints, list):
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joints = [joints]
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@@ -534,25 +583,28 @@ def update_plot(df, joints):
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yaxis_title="Angle Value (degrees)",
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plot_bgcolor="#1E1E1E",
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paper_bgcolor="#1E1E1E",
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-
font=dict(color="#F0F0F0"
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-
xaxis=dict(gridcolor="#444444"
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-
yaxis=dict(gridcolor="#444444"
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-
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)
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return fig
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-
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with gr.Row():
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with gr.Column(scale=3):
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gr.Markdown(
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"""
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| 551 |
-
##
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| 552 |
-
<span style="color:#6b7280">
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| 553 |
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| 554 |
-
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-
Upload C3D files or videos to extract joint angles using [Kinesis](https://myolab.ai/blog/myokinesis) and visualize motion data.
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"""
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)
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with gr.Column(scale=1):
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@@ -562,88 +614,91 @@ with gr.Blocks() as app:
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type="password",
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info="Get your API key from https://dev.myolab.ai",
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)
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-
with gr.
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-
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-
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value=os.path.join(
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os.path.dirname(__file__),
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),
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)
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-
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-
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gr.HTML(
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create_info_text(
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"2. Upload C3D Motion Capture File(s)",
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"Upload one or more C3D files containing 3D marker trajectories from motion capture systems."
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+ 'Example from CMU dataset: <a href="https://mocap.cs.cmu.edu/subjects/35/35_30.c3d">35_30.c3d</a>',
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)
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)
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os.path.join(os.path.dirname(__file__), "./data/35_30.c3d")
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],
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)
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-
|
| 618 |
-
Please cite the [paper](https://arxiv.org/abs/2007.07227) if you use this feature.
|
| 619 |
-
For commercial applications, please contact MyoLab at contacts@myolab.ai.
|
| 620 |
-
"""
|
| 621 |
-
)
|
| 622 |
-
video_file = gr.Video(
|
| 623 |
-
label="1. Upload a Video File (Supported formats: MP4, AVI, MOV, MKV)",
|
| 624 |
-
height=400,
|
| 625 |
-
value=os.path.join(
|
| 626 |
-
os.path.dirname(__file__), "./data/13710671_1080_1920_25fps.mp4"
|
| 627 |
-
),
|
| 628 |
-
)
|
| 629 |
-
run_v2m_btn_video = gr.Button(
|
| 630 |
-
"2. π Run Retargeting from Video", variant="primary"
|
| 631 |
-
)
|
| 632 |
-
|
| 633 |
-
output_3d_motion = gr.Model3D(
|
| 634 |
-
label="3D Motion Visualization",
|
| 635 |
-
visible=False,
|
| 636 |
-
)
|
| 637 |
output_file = gr.File(
|
| 638 |
label="π₯ Download Results - Download the retargeted motion data as a Parquet (.parquet) file containing joint angles and metadata.",
|
| 639 |
-
visible=
|
| 640 |
)
|
| 641 |
df_state = gr.State()
|
| 642 |
joint_dropdown = gr.Dropdown(
|
| 643 |
label="Select Joint Angle(s) to Visualize",
|
| 644 |
-
|
|
|
|
| 645 |
multiselect=True,
|
| 646 |
-
visible=
|
| 647 |
info="After processing completes, select one or more joint angles to plot. The dropdown will be populated with available joints from the retargeted data.",
|
| 648 |
)
|
| 649 |
plot_area = gr.Plot(
|
|
@@ -655,11 +710,40 @@ with gr.Blocks() as app:
|
|
| 655 |
lines=12,
|
| 656 |
info="Real-time status updates showing the progress of file uploads, retargeting jobs, and data processing.",
|
| 657 |
)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 658 |
|
| 659 |
joint_dropdown.change(
|
| 660 |
-
fn=
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 661 |
inputs=[df_state, joint_dropdown],
|
| 662 |
outputs=[plot_area],
|
|
|
|
| 663 |
)
|
| 664 |
run_btn_c3d.click(
|
| 665 |
fn=run_retargeting_c3d,
|
|
|
|
| 17 |
|
| 18 |
import cv2
|
| 19 |
import gradio as gr
|
| 20 |
+
import myosdk
|
| 21 |
import numpy as np
|
| 22 |
+
import pandas as pd
|
| 23 |
import plotly.graph_objs as go
|
| 24 |
import spaces
|
| 25 |
import torch
|
| 26 |
+
from embed4d import model3d_viewer
|
| 27 |
from metrabs_pytorch.scripts.run_video import run_metrabs_video
|
| 28 |
from myo_tools.mjs.marker.marker_api import get_marker_names
|
| 29 |
from myo_tools.utils.file_ops.dataframe_utils import from_array_to_dataframe
|
|
|
|
| 41 |
|
| 42 |
|
| 43 |
DEVICE = "cuda" if torch.cuda.is_available() else "cpu"
|
| 44 |
+
UPLOAD_GLB = os.path.join(os.path.dirname(__file__), "./info_files/upload_files.glb")
|
| 45 |
+
ERROR_GLB = os.path.join(os.path.dirname(__file__), "./info_files/error.glb")
|
| 46 |
+
PROCESSING_GLB = os.path.join(os.path.dirname(__file__), "./info_files/processing.glb")
|
| 47 |
|
| 48 |
|
| 49 |
def draw_keypoints(frame, poses2d, radius=10):
|
|
|
|
| 75 |
return output_video
|
| 76 |
|
| 77 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 78 |
def create_info_text(title, info_text):
|
| 79 |
return f"""
|
| 80 |
<div>
|
|
|
|
| 154 |
None,
|
| 155 |
gr.update(value=[], visible=True),
|
| 156 |
gr.update(visible=False),
|
| 157 |
+
gr.update(visible=True, value=model3d_viewer(ERROR_GLB)),
|
| 158 |
)
|
| 159 |
return
|
| 160 |
|
|
|
|
| 165 |
None,
|
| 166 |
gr.update(value=[], visible=True),
|
| 167 |
gr.update(visible=False),
|
| 168 |
+
gr.update(visible=True, value=model3d_viewer(ERROR_GLB)),
|
| 169 |
)
|
| 170 |
|
| 171 |
try:
|
|
|
|
| 174 |
init_time = time.time()
|
| 175 |
yield "\n".join(status), None, None, gr.update(visible=False), gr.update(
|
| 176 |
visible=False
|
| 177 |
+
), gr.update(visible=True, value=model3d_viewer(PROCESSING_GLB)),
|
| 178 |
client = Client(api_key=api_key)
|
| 179 |
|
| 180 |
status.append(
|
|
|
|
| 185 |
status.append("πΉ Uploading markerset file...")
|
| 186 |
yield "\n".join(status), None, None, gr.update(value=[]), gr.update(
|
| 187 |
visible=False
|
| 188 |
+
), gr.update(visible=True, value=model3d_viewer(PROCESSING_GLB)),
|
| 189 |
mk_asset = client.assets.upload_file(markerset_file.name)
|
| 190 |
|
| 191 |
status.append(
|
|
|
|
| 193 |
)
|
| 194 |
yield "\n".join(status), None, None, gr.update(value=[]), gr.update(
|
| 195 |
visible=False
|
| 196 |
+
), gr.update(visible=True, value=model3d_viewer(PROCESSING_GLB)),
|
| 197 |
|
| 198 |
mk_id = mk_asset["asset_id"]
|
| 199 |
|
|
|
|
| 206 |
|
| 207 |
yield "\n".join(status), None, None, gr.update(value=[]), gr.update(
|
| 208 |
visible=False
|
| 209 |
+
), gr.update(visible=True, value=model3d_viewer(PROCESSING_GLB)),
|
| 210 |
|
| 211 |
init_time = time.time()
|
| 212 |
tracker_asset = client.assets.upload_file(f)
|
|
|
|
| 215 |
)
|
| 216 |
yield "\n".join(status), None, None, gr.update(value=[]), gr.update(
|
| 217 |
visible=False
|
| 218 |
+
), gr.update(visible=True, value=model3d_viewer(PROCESSING_GLB)),
|
| 219 |
init_time = time.time()
|
| 220 |
job = client.jobs.start_retarget(
|
| 221 |
tracker_asset_id=tracker_asset["asset_id"],
|
|
|
|
| 228 |
)
|
| 229 |
yield "\n".join(status), None, None, gr.update(value=[]), gr.update(
|
| 230 |
visible=False
|
| 231 |
+
), gr.update(visible=True, value=model3d_viewer(PROCESSING_GLB)),
|
| 232 |
init_time = time.time()
|
| 233 |
result = client.jobs.wait(job["job_id"])
|
| 234 |
|
| 235 |
status.append(
|
| 236 |
f"\tπΉ Retargeting job completed in {time.time() - init_time:.2f} seconds"
|
| 237 |
+
)
|
| 238 |
yield "\n".join(status), None, None, gr.update(value=[]), gr.update(
|
| 239 |
visible=False
|
| 240 |
+
), gr.update(visible=True, value=model3d_viewer(PROCESSING_GLB)),
|
| 241 |
assert (
|
| 242 |
result["status"] == "SUCCEEDED"
|
| 243 |
), f"Failed retarget for {os.path.basename(f)}"
|
|
|
|
| 268 |
time.sleep(0.1) # allow filesystem flush
|
| 269 |
yield "\n".join(status), None, None, gr.update(
|
| 270 |
interactive=True, visible=True
|
| 271 |
+
), gr.update(visible=True), gr.update(
|
| 272 |
+
visible=True, value=model3d_viewer(output_glb_files[0])
|
| 273 |
+
)
|
| 274 |
+
assert os.path.exists(out_path)
|
| 275 |
df = from_qpos_to_joint_angles(output_files[0])
|
| 276 |
|
| 277 |
angle_list = list(df.columns[1:])
|
| 278 |
initial_value = [angle_list[0]] if angle_list else []
|
| 279 |
+
initial_plot = update_plot(df, initial_value)
|
| 280 |
status.append("β
Complete!")
|
| 281 |
+
df_state_path = os.path.abspath(output_files[0])
|
| 282 |
yield (
|
| 283 |
"\n".join(status),
|
| 284 |
gr.update(value=output_files, visible=True),
|
| 285 |
+
df_state_path, # Use absolute path for Linux compatibility
|
| 286 |
+
gr.update(
|
| 287 |
+
choices=angle_list, value=initial_value, visible=True, interactive=True
|
| 288 |
+
),
|
| 289 |
+
gr.update(value=initial_plot, visible=True),
|
| 290 |
+
gr.update(visible=True, value=model3d_viewer(output_glb_files[0])),
|
| 291 |
)
|
| 292 |
|
| 293 |
except Exception as e:
|
|
|
|
| 297 |
None,
|
| 298 |
gr.update(visible=False),
|
| 299 |
gr.update(visible=False),
|
| 300 |
+
gr.update(visible=True, value=model3d_viewer(ERROR_GLB)),
|
| 301 |
)
|
| 302 |
|
| 303 |
|
|
|
|
| 321 |
gr.update(visible=False),
|
| 322 |
gr.update(visible=False),
|
| 323 |
video_file,
|
| 324 |
+
gr.update(visible=True, value=model3d_viewer(ERROR_GLB)),
|
| 325 |
)
|
| 326 |
return
|
| 327 |
|
|
|
|
| 343 |
gr.update(visible=False),
|
| 344 |
gr.update(visible=False),
|
| 345 |
video_file,
|
| 346 |
+
gr.update(visible=True, value=model3d_viewer(ERROR_GLB)),
|
| 347 |
)
|
| 348 |
return
|
| 349 |
|
|
|
|
| 356 |
init_time = time.time()
|
| 357 |
yield "\n".join(status), None, None, gr.update(visible=False), gr.update(
|
| 358 |
visible=False
|
| 359 |
+
), video_path, gr.update(visible=True, value=model3d_viewer(PROCESSING_GLB)),
|
| 360 |
|
| 361 |
results = list(
|
| 362 |
run_metrabs_video(video_path=video_path, device=DEVICE, visualize=False)
|
|
|
|
| 365 |
np.array([res["poses3d"] for res in results]).squeeze()
|
| 366 |
)
|
| 367 |
|
| 368 |
+
markers[:, :, 2] = markers[:, :, 2] - np.min(markers[:, :, 2])
|
| 369 |
+
|
| 370 |
fps = (
|
| 371 |
results[0]["fps"] if results else 25.0
|
| 372 |
) # Default to 25 fps if not available
|
|
|
|
| 378 |
|
| 379 |
yield "\n".join(status), None, None, gr.update(visible=False), gr.update(
|
| 380 |
visible=True
|
| 381 |
+
), video_with_keypoints, gr.update(
|
| 382 |
+
visible=True, value=model3d_viewer(PROCESSING_GLB)
|
| 383 |
+
),
|
| 384 |
status.append(
|
| 385 |
f"πΉ Pose Extraction from Video Completed in {time.time() - init_time:.2f} seconds with {len(markers)} frames extracted ({((time.time() - init_time)/len(markers)):.2f} seconds per frame)"
|
| 386 |
)
|
| 387 |
print("πΉ Pose Extraction from Video Completed")
|
| 388 |
+
yield "\n".join(status), None, None, None, gr.update(
|
| 389 |
visible=False
|
| 390 |
+
), video_with_keypoints, gr.update(
|
| 391 |
+
visible=True, value=model3d_viewer(PROCESSING_GLB)
|
| 392 |
+
),
|
| 393 |
# Initialize client
|
| 394 |
status.append("πΉ Initializing MyoSDK client...")
|
| 395 |
init_time = time.time()
|
| 396 |
yield "\n".join(status), None, None, gr.update(visible=False), gr.update(
|
| 397 |
visible=False,
|
| 398 |
+
), video_with_keypoints, gr.update(
|
| 399 |
+
visible=True, value=model3d_viewer(PROCESSING_GLB)
|
| 400 |
+
),
|
| 401 |
client = Client(api_key=api_key)
|
| 402 |
|
| 403 |
status.append(
|
|
|
|
| 406 |
init_time = time.time()
|
| 407 |
# Upload markerset
|
| 408 |
status.append("πΉ Uploading markerset file...")
|
| 409 |
+
yield "\n".join(status), None, None, gr.update(visible=False), gr.update(
|
| 410 |
visible=False,
|
| 411 |
+
), video_with_keypoints, gr.update(
|
| 412 |
+
visible=True, value=model3d_viewer(PROCESSING_GLB)
|
| 413 |
+
),
|
| 414 |
|
| 415 |
markerset_file_name = "markersets/movi_metrabs_markerset.xml"
|
| 416 |
|
|
|
|
| 420 |
f"πΉ Markerset file uploaded in {time.time() - init_time:.2f} seconds"
|
| 421 |
)
|
| 422 |
|
| 423 |
+
yield "\n".join(status), None, None, gr.update(visible=False), gr.update(
|
| 424 |
visible=False
|
| 425 |
+
), video_with_keypoints, gr.update(
|
| 426 |
+
visible=True, value=model3d_viewer(PROCESSING_GLB)
|
| 427 |
+
),
|
| 428 |
init_time = time.time()
|
| 429 |
|
| 430 |
marker_names = get_marker_names(markerset_file_name)
|
|
|
|
| 454 |
)
|
| 455 |
yield "\n".join(status), None, None, gr.update(value=[]), gr.update(
|
| 456 |
visible=False
|
| 457 |
+
), video_with_keypoints, gr.update(
|
| 458 |
+
visible=True, value=model3d_viewer(PROCESSING_GLB)
|
| 459 |
+
),
|
| 460 |
init_time = time.time()
|
| 461 |
result = client.jobs.wait(job["job_id"])
|
| 462 |
|
| 463 |
status.append(
|
| 464 |
f"\tπΉ Retargeting job completed in {time.time() - init_time:.2f} seconds"
|
| 465 |
)
|
| 466 |
+
yield "\n".join(status), None, None, gr.update(visible=False), gr.update(
|
| 467 |
visible=False
|
| 468 |
+
), video_with_keypoints, gr.update(
|
| 469 |
+
visible=True, value=model3d_viewer(PROCESSING_GLB)
|
| 470 |
+
),
|
| 471 |
|
| 472 |
print("STATUS: ", result["status"])
|
| 473 |
assert (
|
|
|
|
| 489 |
result["output"]["retarget_output_asset_ids"]["motion"], output_glb_path
|
| 490 |
)
|
| 491 |
|
| 492 |
+
assert os.path.getsize(output_glb_path) > 0
|
| 493 |
+
time.sleep(0.1) # allow filesystem flush
|
| 494 |
+
print("output_glb_path: ", output_glb_path, os.path.getsize(output_glb_path))
|
| 495 |
# Load angles from first output file
|
| 496 |
status.append("πΉ Loading animation and angle data...")
|
| 497 |
+
yield "\n".join(status), None, None, gr.update(visible=False), gr.update(
|
| 498 |
+
visible=True
|
| 499 |
+
), video_with_keypoints, gr.update(
|
| 500 |
+
visible=True, value=model3d_viewer(output_glb_path)
|
| 501 |
)
|
| 502 |
+
assert os.path.exists(out_path)
|
| 503 |
df = from_qpos_to_joint_angles(out_path)
|
| 504 |
|
| 505 |
angle_list = list(df.columns[1:])
|
| 506 |
initial_value = [angle_list[0]] if angle_list else []
|
| 507 |
+
initial_plot = update_plot(df, initial_value)
|
| 508 |
status.append("β
Complete!")
|
| 509 |
+
df_state_path = os.path.abspath(out_path)
|
| 510 |
yield (
|
| 511 |
"\n".join(status),
|
| 512 |
gr.update(value=out_path, visible=True),
|
| 513 |
+
df_state_path, # Use absolute path for Linux compatibility
|
| 514 |
+
gr.update(
|
| 515 |
+
choices=angle_list, value=initial_value, visible=True, interactive=True
|
| 516 |
+
),
|
| 517 |
+
gr.update(value=initial_plot, visible=True),
|
| 518 |
video_with_keypoints,
|
| 519 |
+
gr.update(visible=True, value=model3d_viewer(output_glb_path)),
|
| 520 |
)
|
| 521 |
+
return
|
| 522 |
|
| 523 |
except Exception as e:
|
| 524 |
# Use video_path if defined, otherwise use video_file or None
|
|
|
|
| 534 |
gr.update(visible=False),
|
| 535 |
gr.update(visible=False),
|
| 536 |
error_video,
|
| 537 |
+
gr.update(visible=True, value=model3d_viewer(ERROR_GLB)),
|
| 538 |
)
|
| 539 |
|
| 540 |
|
| 541 |
# ------------------------------------------------------------
|
| 542 |
# Plotting
|
| 543 |
# ------------------------------------------------------------
|
| 544 |
+
|
| 545 |
+
|
| 546 |
+
def update_plot(parquet_path, joints):
|
| 547 |
+
"""Safe Linux/macOS plotting from parquet or DataFrame."""
|
| 548 |
+
# Check joints first to avoid unnecessary processing
|
| 549 |
if not joints:
|
| 550 |
return go.Figure()
|
| 551 |
+
|
| 552 |
+
# Check if parquet_path is valid
|
| 553 |
+
if parquet_path is None:
|
| 554 |
+
return go.Figure()
|
| 555 |
+
|
| 556 |
+
if isinstance(parquet_path, pd.DataFrame):
|
| 557 |
+
df = parquet_path
|
| 558 |
+
else:
|
| 559 |
+
# Nothing loaded yet - check if it's an empty string
|
| 560 |
+
if parquet_path == "":
|
| 561 |
+
return go.Figure()
|
| 562 |
+
|
| 563 |
+
# File might not exist yet (race-safe)
|
| 564 |
+
if not os.path.exists(parquet_path):
|
| 565 |
+
return go.Figure()
|
| 566 |
+
|
| 567 |
+
df = pd.read_parquet(parquet_path)
|
| 568 |
+
|
| 569 |
+
if df is None or df.empty:
|
| 570 |
+
return go.Figure()
|
| 571 |
+
|
| 572 |
if not isinstance(joints, list):
|
| 573 |
joints = [joints]
|
| 574 |
|
|
|
|
| 583 |
yaxis_title="Angle Value (degrees)",
|
| 584 |
plot_bgcolor="#1E1E1E",
|
| 585 |
paper_bgcolor="#1E1E1E",
|
| 586 |
+
font=dict(color="#F0F0F0"),
|
| 587 |
+
xaxis=dict(gridcolor="#444444"),
|
| 588 |
+
yaxis=dict(gridcolor="#444444"),
|
| 589 |
+
dragmode="pan",
|
| 590 |
)
|
| 591 |
+
|
| 592 |
return fig
|
| 593 |
|
| 594 |
|
| 595 |
+
CSS = """
|
| 596 |
+
.left-panel, .right-panel { background-color: #1E1E1E; border:1px solid var(--border-color, #e9ecef) !important; border-radius:15px !important; box-shadow:0 4px 20px rgba(0,0,0,.08) !important; padding:12px !important; }
|
| 597 |
+
"""
|
| 598 |
+
with gr.Blocks(css=CSS) as app:
|
| 599 |
|
| 600 |
with gr.Row():
|
| 601 |
with gr.Column(scale=3):
|
| 602 |
gr.Markdown(
|
| 603 |
"""
|
| 604 |
+
## <a href="https://myolab.ai/blog/myokinesis">MyoKinesis</a>
|
| 605 |
+
<span style="color:#6b7280">High-Fidelity Human Motion Reconstruction for Developers, Researchers, and Builders</span>
|
| 606 |
|
| 607 |
+
Reconstruct anatomically accurate human motion from uploaded C3D or video data using MyoKinesis.
|
|
|
|
| 608 |
"""
|
| 609 |
)
|
| 610 |
with gr.Column(scale=1):
|
|
|
|
| 614 |
type="password",
|
| 615 |
info="Get your API key from https://dev.myolab.ai",
|
| 616 |
)
|
| 617 |
+
with gr.Row(height=550):
|
| 618 |
+
with gr.Row(height=530, elem_classes=["left-panel"]):
|
| 619 |
+
with gr.Tab("π MoCap"):
|
| 620 |
+
with gr.Row():
|
| 621 |
+
with gr.Column(scale=2):
|
| 622 |
+
gr.HTML(
|
| 623 |
+
create_info_text(
|
| 624 |
+
"1. Upload a Markerset File",
|
| 625 |
+
"Upload an XML file that defines the marker set configuration. This file specifies which markers are used and their anatomical locations."
|
| 626 |
+
+ 'See <a href="https://markerset-editor.myolab.ai">Markerset Editor</a> for more details.',
|
| 627 |
+
)
|
| 628 |
+
)
|
| 629 |
+
|
| 630 |
+
markerset = gr.File(
|
| 631 |
+
# label=None,
|
| 632 |
+
file_types=[".xml"],
|
| 633 |
+
elem_id="file-upload-markerset",
|
| 634 |
+
value=os.path.join(
|
| 635 |
+
os.path.dirname(__file__),
|
| 636 |
+
"../markersets/cmu_markerset.xml",
|
| 637 |
+
),
|
| 638 |
+
)
|
| 639 |
+
|
| 640 |
+
gr.HTML(
|
| 641 |
+
create_info_text(
|
| 642 |
+
"2. Upload C3D Motion Capture File(s)",
|
| 643 |
+
"Upload one or more C3D files containing 3D marker trajectories from motion capture systems."
|
| 644 |
+
+ 'Example from CMU dataset: <a href="https://mocap.cs.cmu.edu/subjects/35/35_30.c3d">35_30.c3d</a>',
|
| 645 |
+
)
|
| 646 |
+
)
|
| 647 |
+
c3d_files = gr.File(
|
| 648 |
+
label=None,
|
| 649 |
+
file_types=[".c3d"],
|
| 650 |
+
elem_id="file-upload-c3d",
|
| 651 |
+
file_count="multiple",
|
| 652 |
+
value=[
|
| 653 |
+
os.path.join(
|
| 654 |
+
os.path.dirname(__file__), "./data/35_30.c3d"
|
| 655 |
+
)
|
| 656 |
+
],
|
| 657 |
+
)
|
| 658 |
+
|
| 659 |
+
run_btn_c3d = gr.Button(
|
| 660 |
+
"3. π Run Retargeting", variant="primary"
|
| 661 |
+
)
|
| 662 |
+
|
| 663 |
+
with gr.Tab("π₯ Video"):
|
| 664 |
+
video_file = gr.Video(
|
| 665 |
+
label="1. Upload a Video File (Supported formats: MP4, AVI, MOV, MKV)",
|
| 666 |
+
height=300,
|
| 667 |
value=os.path.join(
|
| 668 |
+
os.path.dirname(__file__),
|
| 669 |
+
"./data/5385885.mp4",
|
| 670 |
),
|
| 671 |
)
|
| 672 |
+
run_v2m_btn_video = gr.Button(
|
| 673 |
+
"2. π Run Retargeting from Video", variant="primary"
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 674 |
)
|
| 675 |
+
gr.Markdown(
|
| 676 |
+
"""
|
| 677 |
+
β οΈ **Important:** Using Metrabs for video motion retargeting **ONLY FOR RESEARCH/ACADEMIC USE**.
|
| 678 |
+
Please cite the [paper](https://arxiv.org/abs/2007.07227).
|
| 679 |
+
For commercial applications, contact `contacts@myolab.ai`
|
| 680 |
+
"""
|
|
|
|
|
|
|
| 681 |
)
|
| 682 |
+
with gr.Row(height=530, elem_classes=["right-panel"]):
|
| 683 |
+
output_3d_motion = gr.HTML(
|
| 684 |
+
label="3D Motion Visualization",
|
| 685 |
+
visible=True,
|
| 686 |
+
value=model3d_viewer(
|
| 687 |
+
UPLOAD_GLB,
|
| 688 |
+
height=500,
|
| 689 |
+
),
|
| 690 |
+
)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 691 |
output_file = gr.File(
|
| 692 |
label="π₯ Download Results - Download the retargeted motion data as a Parquet (.parquet) file containing joint angles and metadata.",
|
| 693 |
+
visible=True,
|
| 694 |
)
|
| 695 |
df_state = gr.State()
|
| 696 |
joint_dropdown = gr.Dropdown(
|
| 697 |
label="Select Joint Angle(s) to Visualize",
|
| 698 |
+
choices=[],
|
| 699 |
+
interactive=True,
|
| 700 |
multiselect=True,
|
| 701 |
+
visible=False, # Hidden initially, shown only when data is ready
|
| 702 |
info="After processing completes, select one or more joint angles to plot. The dropdown will be populated with available joints from the retargeted data.",
|
| 703 |
)
|
| 704 |
plot_area = gr.Plot(
|
|
|
|
| 710 |
lines=12,
|
| 711 |
info="Real-time status updates showing the progress of file uploads, retargeting jobs, and data processing.",
|
| 712 |
)
|
| 713 |
+
gr.Markdown(f"MyoSDK v{myosdk.__version__}")
|
| 714 |
+
|
| 715 |
+
def update_plot_wrapper(parquet_path, joints):
|
| 716 |
+
"""Wrapper to ensure plot is visible and updated on Linux."""
|
| 717 |
+
if not joints:
|
| 718 |
+
return gr.update(value=go.Figure(), visible=False)
|
| 719 |
+
|
| 720 |
+
if parquet_path is None:
|
| 721 |
+
return gr.update(value=go.Figure(), visible=False)
|
| 722 |
+
|
| 723 |
+
# Check if file exists and convert to absolute path for consistency
|
| 724 |
+
if isinstance(parquet_path, str):
|
| 725 |
+
if not os.path.exists(parquet_path):
|
| 726 |
+
return gr.update(value=go.Figure(), visible=False)
|
| 727 |
+
parquet_path = os.path.abspath(parquet_path)
|
| 728 |
+
|
| 729 |
+
try:
|
| 730 |
+
fig = update_plot(parquet_path, joints)
|
| 731 |
+
return gr.update(value=fig, visible=True)
|
| 732 |
+
except Exception:
|
| 733 |
+
return gr.update(value=go.Figure(), visible=False)
|
| 734 |
|
| 735 |
joint_dropdown.change(
|
| 736 |
+
fn=update_plot_wrapper,
|
| 737 |
+
inputs=[df_state, joint_dropdown],
|
| 738 |
+
outputs=[plot_area],
|
| 739 |
+
show_progress=False,
|
| 740 |
+
)
|
| 741 |
+
|
| 742 |
+
joint_dropdown.input(
|
| 743 |
+
fn=update_plot_wrapper,
|
| 744 |
inputs=[df_state, joint_dropdown],
|
| 745 |
outputs=[plot_area],
|
| 746 |
+
show_progress=False,
|
| 747 |
)
|
| 748 |
run_btn_c3d.click(
|
| 749 |
fn=run_retargeting_c3d,
|
data/5385885.mp4
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:615a11bd65c7d1e3af4c309f00335e3be464b7ecb9e6b3bbc354ca80c6df338c
|
| 3 |
+
size 690209
|
info_files/error.glb
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:dcefaeeee6ee7a94c2a8f582af1466e21460bc5f8e4fb0f47e33670cb8288711
|
| 3 |
+
size 237300
|
info_files/processing.glb
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:e3615d2ef57ca201a359d9d66c595783f8921b873d96635c915959d0ff147412
|
| 3 |
+
size 640944
|
info_files/upload_files.glb
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:441bd0d6b6265e38c9686e929f694dc84ca9ebe3810a3446adb0a2ea737299e0
|
| 3 |
+
size 247132
|
requirements.txt
CHANGED
|
@@ -3,4 +3,5 @@ plotly
|
|
| 3 |
myosdk>=0.1.0
|
| 4 |
myo_tools
|
| 5 |
git+https://github.com/Vittorio-Caggiano/metrabs.git
|
| 6 |
-
spaces
|
|
|
|
|
|
| 3 |
myosdk>=0.1.0
|
| 4 |
myo_tools
|
| 5 |
git+https://github.com/Vittorio-Caggiano/metrabs.git
|
| 6 |
+
spaces
|
| 7 |
+
embed4d
|