Update README.md

README.md

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+---
+title: CellMap
+emoji: 🔬
+colorFrom: blue
+colorTo: green
+---
+
+<img src="https://raw.githubusercontent.com/janelia-cellmap/cellmap-models/main/assets/CellMapLogo2.png" alt="CellMap logo" width="60%">
+
+# CellMap - HHMI Janelia
+
+The [CellMap](https://www.janelia.org/project-team/cellmap) project team at **HHMI Janelia Research Campus** develops machine learning models for segmentation of cellular structures in volume electron microscopy (vEM) data.
+
+## Models
+
+We provide pre-trained deep learning models for 3D organelle segmentation, available in multiple formats:
+
+| Format | Extension | Use Case |
+|---|---|---|
+| PyTorch | `.pt` | Full model for Python workflows |
+| TorchScript | `.ts` | Deployment without Python dependencies |
+| ONNX | `.onnx` | Cross-framework inference |
+
+### Available Segmentation Targets
+
+- Mitochondria
+- Endoplasmic Reticulum (ER)
+- Nucleus
+- Peroxisomes
+- Plasma Membrane
+- Vesicles
+- And more...
+
+## Quick Start
+
+```bash
+pip install cellmap-models
+```
+
+```python
+from cellmap_models.model_export.cellmap_model import CellmapModel
+from huggingface_hub import snapshot_download
+
+# Download and load any model
+path = snapshot_download(repo_id="cellmap/your-model-name")
+model = CellmapModel(path)
+
+# Inference
+output = model.ts_model(input_tensor)
+
+# Finetuning
+trainable_model = model.train()
+```
+
+## Resources
+
+- [cellmap-models (GitHub)](https://github.com/janelia-cellmap/cellmap-models) - Model architectures, weights, and export tools
+- [CellMap Project Page](https://www.janelia.org/project-team/cellmap)
+- [OpenOrganelle](https://openorganelle.janelia.org/) - Browse our EM datasets
+
+## Publications
+
+- Heinrich, L. et al. [Whole-cell organelle segmentation in volume electron microscopy](https://doi.org/10.1038/s41586-021-03977-3). *Nature* (2021)
+
+## Contact
 
-Edit this `README.md` markdown file to author your organization card.
+For questions or collaborations, visit our [GitHub](https://github.com/janelia-cellmap) or reach out through the [Janelia CellMap](https://www.janelia.org/project-team/cellmap) project page.