feat: add dockerfile

Dockerfile

@@ -1,13 +1,25 @@
-FROM python:3.13
+FROM unclecode/crawl4ai:latest
 
+RUN apt-get update && apt-get install -y --no-install-recommends \
+      curl ca-certificates
+
+# Install UV as root
+ADD https://astral.sh/uv/install.sh /uv-installer.sh
+RUN sh /uv-installer.sh && rm /uv-installer.sh
+
+# On met root et user
 RUN useradd -m -u 1000 user
-USER user
-ENV PATH="/home/user/.local/bin:$PATH"
 
+# On expose les deux .local/bin — racine et utilisateur
+ENV PATH="/root/.local/bin:/home/user/.local/bin:$PATH"
+
+USER user
 WORKDIR /app
 
-COPY --chown=user ./requirements.txt requirements.txt
-RUN pip install --no-cache-dir --upgrade -r requirements.txt
+COPY --chown=user ./pyproject.toml pyproject.toml
+RUN uv sync .
 
 COPY --chown=user . /app
-CMD ["uvicorn", "app:app", "--host", "0.0.0.0", "--port", "7860"]
+
+# Run the application
+CMD ["uvicorn", "deepengineer.backend.entry_point:app", "--host", "0.0.0.0", "--port", "7860"]

pyproject.toml

@@ -25,6 +25,7 @@ dependencies = [
     "scipy>=1.16.0",
     "starlette>=0.47.1",
     "fastapi>=0.116.1",
+    "uvicorn[standard]>=0.35.0",
 ]
 
 [project.scripts]

src/deepengineer/backend/entry_point.py

@@ -19,3 +19,8 @@ async def run_agent(request: AgentRequest):
     # Run the agent synchronously in a background thread
     result = await anyio.to_thread.run_sync(main_search, task)
     return JSONResponse(content={"result": result})
+
+
+@app.get("/")
+async def root():
+    return {"message": "Hello World"}

src/deepengineer/deepsearch/main_agent.py

@@ -113,7 +113,6 @@ def create_main_search_agent(
     WEB_SEARCH_TOOLS = [
         SearchTool(),
         ArxivSearchTool(),
-        PubmedSearchTool(),
         ScientificSearchTool(),
         GetTableOfContentsTool(database),
         GetMarkdownTool(database),
@@ -127,6 +126,14 @@ def create_main_search_agent(
         tools=WEB_SEARCH_TOOLS,
         max_steps=20,
         verbosity_level=2,
+        additional_authorized_imports=[
+            "matplotlib.*",
+            "numpy.*",
+            "pandas.*",
+            "seaborn.*",
+            "scipy.*",
+            "sympy.*",
+        ],
     )
     return search_agent
 
@@ -157,9 +164,9 @@ Failure or 'I cannot answer' or 'None found' will not be tolerated, success will
 Run verification steps if that's needed, you must make sure you find the correct answer! Here is the task:
 {task}
 """
-    agent = create_main_search_agent()
+    agent = create_main_search_agent(model_id="mistral/mistral-medium-latest")
     answer = agent.run(MAIN_PROMPT.format(task=task))
-    print(answer)
+    return answer
 
 
 if __name__ == "__main__":

uv.lock

@@ -400,6 +400,7 @@ dependencies = [
     { name = "starlette" },
     { name = "sympy" },
     { name = "tavily-python" },
+    { name = "uvicorn", extra = ["standard"] },
 ]
 
 [package.optional-dependencies]
@@ -431,6 +432,7 @@ requires-dist = [
     { name = "starlette", specifier = ">=0.47.1" },
     { name = "sympy", specifier = ">=1.14.0" },
     { name = "tavily-python", specifier = ">=0.7.9" },
+    { name = "uvicorn", extras = ["standard"], specifier = ">=0.35.0" },
 ]
 provides-extras = ["dev"]
 
@@ -631,6 +633,21 @@ wheels = [
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 ]
 
+[[package]]
+name = "httptools"
+version = "0.6.4"
+source = { registry = "https://pypi.org/simple" }
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+    { url = "https://files.pythonhosted.org/packages/1e/6a/787004fdef2cabea27bad1073bf6a33f2437b4dbd3b6fb4a9d71172b1c7c/httptools-0.6.4-cp313-cp313-musllinux_1_2_x86_64.whl", hash = "sha256:4b36913ba52008249223042dca46e69967985fb4051951f94357ea681e1f5dc0", size = 452042 },
+    { url = "https://files.pythonhosted.org/packages/4d/dc/7decab5c404d1d2cdc1bb330b1bf70e83d6af0396fd4fc76fc60c0d522bf/httptools-0.6.4-cp313-cp313-win_amd64.whl", hash = "sha256:28908df1b9bb8187393d5b5db91435ccc9c8e891657f9cbb42a2541b44c82fc8", size = 87682 },
+]
+
 [[package]]
 name = "httpx"
 version = "0.28.1"
@@ -1935,6 +1952,44 @@ wheels = [
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 ]
 
+[[package]]
+name = "uvicorn"
+version = "0.35.0"
+source = { registry = "https://pypi.org/simple" }
+dependencies = [
+    { name = "click" },
+    { name = "h11" },
+]
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+]
+
+[package.optional-dependencies]
+standard = [
+    { name = "colorama", marker = "sys_platform == 'win32'" },
+    { name = "httptools" },
+    { name = "python-dotenv" },
+    { name = "pyyaml" },
+    { name = "uvloop", marker = "platform_python_implementation != 'PyPy' and sys_platform != 'cygwin' and sys_platform != 'win32'" },
+    { name = "watchfiles" },
+    { name = "websockets" },
+]
+
+[[package]]
+name = "uvloop"
+version = "0.21.0"
+source = { registry = "https://pypi.org/simple" }
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 name = "virtualenv"
 version = "20.31.2"
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