#------------------------------------------------------------------------------- # Name: gcn_basic_modules.py # Purpose: basic structures (layers) used in our models # RigNet Copyright 2020 University of Massachusetts # RigNet is made available under General Public License Version 3 (GPLv3), or under a Commercial License. # Please see the LICENSE README.txt file in the main directory for more information and instruction on using and licensing RigNet. #------------------------------------------------------------------------------- import torch from torch_geometric.nn import MessagePassing from torch_scatter import scatter_max, scatter_mean from torch_geometric.utils import add_self_loops, remove_self_loops, softmax from torch.nn import Sequential, Dropout, Linear, ReLU, BatchNorm1d, Parameter def MLP(channels, batch_norm=True): if batch_norm: return Sequential(*[Sequential(Linear(channels[i - 1], channels[i]), ReLU(), BatchNorm1d(channels[i], momentum=0.1)) for i in range(1, len(channels))]) else: return Sequential(*[Sequential(Linear(channels[i - 1], channels[i]), ReLU()) for i in range(1, len(channels))]) class EdgeConv(MessagePassing): def __init__(self, in_channels, out_channels, nn, aggr='max', **kwargs): super(EdgeConv, self).__init__(aggr=aggr, **kwargs) self.in_channels = in_channels self.out_channels = out_channels self.nn = nn def forward(self, x, edge_index): """""" x = x.unsqueeze(-1) if x.dim() == 1 else x edge_index, _ = remove_self_loops(edge_index) edge_index, _ = add_self_loops(edge_index, num_nodes=x.size(0)) return self.propagate(edge_index, x=x) def message(self, x_i, x_j): return self.nn(torch.cat([x_i, (x_j - x_i)], dim=1)) def update(self, aggr_out): aggr_out = aggr_out.view(-1, self.out_channels) return aggr_out def __repr__(self): return '{}(nn={})'.format(self.__class__.__name__, self.nn) class GCU(torch.nn.Module): def __init__(self, in_channels, out_channels, aggr='max'): super(GCU, self).__init__() self.edge_conv_tpl = EdgeConv(in_channels=in_channels, out_channels=out_channels // 2, nn=MLP([in_channels * 2, out_channels // 2, out_channels // 2]), aggr=aggr) self.edge_conv_geo = EdgeConv(in_channels=in_channels, out_channels=out_channels // 2, nn=MLP([in_channels * 2, out_channels // 2, out_channels // 2]), aggr=aggr) self.mlp = MLP([out_channels, out_channels]) def forward(self, x, tpl_edge_index, geo_edge_index): x_tpl = self.edge_conv_tpl(x, tpl_edge_index) x_geo = self.edge_conv_geo(x, geo_edge_index) x_out = torch.cat([x_tpl, x_geo], dim=1) x_out = self.mlp(x_out) return x_out