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environment.py
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| 1 |
+
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| 2 |
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import json
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| 3 |
+
import pandas as pd
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| 4 |
+
import numpy as np
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| 5 |
+
from typing import Any, Dict, Optional, Tuple
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| 6 |
+
from models import Action, Observation, Reward, StepResult, TaskInfo
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| 7 |
+
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| 8 |
+
AVAILABLE_OPERATIONS = [
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| 9 |
+
"remove_duplicates",
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| 10 |
+
"fill_missing",
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| 11 |
+
"fix_dtype",
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| 12 |
+
"remove_outliers",
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| 13 |
+
"rename_columns",
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| 14 |
+
"validate_schema",
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| 15 |
+
"finish"
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| 16 |
+
]
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| 17 |
+
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| 18 |
+
class DataCleaningEnv:
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| 19 |
+
"""
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| 20 |
+
OpenEnv-compliant Data Cleaning Environment.
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| 21 |
+
Agent must clean dirty datasets step by step.
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| 22 |
+
"""
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| 23 |
+
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| 24 |
+
def __init__(self, task_id: str = "easy_dedup_rename"):
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| 25 |
+
self.task_id = task_id
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| 26 |
+
self.current_df: Optional[pd.DataFrame] = None
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| 27 |
+
self.gold_df: Optional[pd.DataFrame] = None
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| 28 |
+
self.task_meta: Dict = {}
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| 29 |
+
self.step_count: int = 0
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| 30 |
+
self.done: bool = False
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| 31 |
+
self.max_steps: int = 10
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| 32 |
+
self.reward_history = []
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| 33 |
+
self._load_task_metadata()
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| 34 |
+
|
| 35 |
+
# βββββββββββββββββββββββββββββββββββββββββ
|
| 36 |
+
# INTERNAL HELPERS
|
| 37 |
+
# βββββββββββββββββββββββββββββββββββββββββ
|
| 38 |
+
|
| 39 |
+
def _load_task_metadata(self):
|
| 40 |
+
with open("datasets/task_metadata.json", "r") as f:
|
| 41 |
+
all_meta = json.load(f)
|
| 42 |
+
|
| 43 |
+
mapping = {
|
| 44 |
+
"easy_dedup_rename": "easy",
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| 45 |
+
"medium_missing_dtype": "medium",
|
| 46 |
+
"hard_full_pipeline": "hard"
|
| 47 |
+
}
|
| 48 |
+
key = mapping.get(self.task_id, "easy")
|
| 49 |
+
self.task_meta = all_meta[key]
|
| 50 |
+
self.max_steps = self.task_meta["max_steps"]
|
| 51 |
+
|
| 52 |
+
def _load_datasets(self):
|
| 53 |
+
mapping = {
|
| 54 |
+
"easy_dedup_rename": "easy",
|
| 55 |
+
"medium_missing_dtype": "medium",
|
| 56 |
+
"hard_full_pipeline": "hard"
|
| 57 |
+
}
|
| 58 |
+
folder = mapping.get(self.task_id, "easy")
|
| 59 |
+
self.current_df = pd.read_csv(f"datasets/{folder}/dirty.csv")
|
| 60 |
+
self.gold_df = pd.read_csv(f"datasets/{folder}/gold.csv")
|
| 61 |
+
|
| 62 |
+
def _get_observation(self, message: str = "") -> Observation:
|
| 63 |
+
df = self.current_df
|
| 64 |
+
missing = {col: int(df[col].isnull().sum()) for col in df.columns}
|
| 65 |
+
dtypes = {col: str(df[col].dtype) for col in df.columns}
|
| 66 |
+
sample = df.head(3).fillna("NULL").to_dict(orient="records")
|
| 67 |
+
|
| 68 |
+
return Observation(
|
| 69 |
+
task_id=self.task_id,
|
| 70 |
+
step=self.step_count,
|
| 71 |
+
dataset_info={
|
| 72 |
+
"total_rows": len(df),
|
| 73 |
+
"total_columns": len(df.columns),
|
| 74 |
+
"has_duplicates": bool(df.duplicated().any()),
|
| 75 |
+
"has_missing": bool(df.isnull().any().any()),
|
| 76 |
+
},
|
| 77 |
+
columns=list(df.columns),
|
| 78 |
+
shape=[len(df), len(df.columns)],
|
| 79 |
+
missing_values=missing,
|
| 80 |
+
dtypes=dtypes,
|
| 81 |
+
duplicate_count=int(df.duplicated().sum()),
|
| 82 |
+
sample_rows=sample,
|
| 83 |
+
available_operations=self.task_meta.get(
|
| 84 |
+
"operations_allowed", AVAILABLE_OPERATIONS
|
| 85 |
+
),
|
| 86 |
+
task_description=self.task_meta.get("description", ""),
|
| 87 |
+
message=message
|
| 88 |
+
)
|
| 89 |
+
|
| 90 |
+
def _compute_reward(self) -> Reward:
|
| 91 |
+
df = self.current_df
|
| 92 |
+
gold = self.gold_df
|
| 93 |
+
scoring = self.task_meta.get("scoring", {})
|
| 94 |
+
|
| 95 |
+
dup_score = 0.0
|
| 96 |
+
missing_score = 0.0
|
| 97 |
+
dtype_score = 0.0
|
| 98 |
+
outlier_score = 0.0
|
| 99 |
+
schema_score = 0.0
|
| 100 |
+
penalty = 0.0
|
| 101 |
+
|
| 102 |
+
# ββ Duplicate score ββββββββββββββββββββββββββββββββββββββββββ
|
| 103 |
+
if "duplicate_score" in scoring:
|
| 104 |
+
gold_rows = len(gold)
|
| 105 |
+
curr_rows = len(df)
|
| 106 |
+
if curr_rows == gold_rows:
|
| 107 |
+
dup_score = 1.0
|
| 108 |
+
elif curr_rows < gold_rows:
|
| 109 |
+
dup_score = max(0.0, curr_rows / gold_rows)
|
| 110 |
+
else:
|
| 111 |
+
excess = curr_rows - gold_rows
|
| 112 |
+
dup_score = max(0.0, 1.0 - (excess / gold_rows))
|
| 113 |
+
|
| 114 |
+
# ββ Missing value score ββββββββββββββββββββββββββββββββββββββ
|
| 115 |
+
if "missing_score" in scoring:
|
| 116 |
+
total_cells = df.shape[0] * df.shape[1]
|
| 117 |
+
missing_curr = int(df.isnull().sum().sum())
|
| 118 |
+
missing_gold = int(gold.isnull().sum().sum())
|
| 119 |
+
if total_cells > 0:
|
| 120 |
+
filled = max(0, missing_curr - missing_gold)
|
| 121 |
+
missing_score = 1.0 - (filled / total_cells)
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| 122 |
+
missing_score = max(0.0, min(1.0, missing_score))
|
| 123 |
+
|
| 124 |
+
# ββ Dtype score ββββββββββββββββββββββββββββββββββββββββββββββ
|
| 125 |
+
if "dtype_score" in scoring:
|
| 126 |
+
common_cols = [c for c in gold.columns if c in df.columns]
|
| 127 |
+
if common_cols:
|
| 128 |
+
matches = sum(
|
| 129 |
+
1 for c in common_cols
|
| 130 |
+
if str(df[c].dtype) == str(gold[c].dtype)
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| 131 |
+
)
|
| 132 |
+
dtype_score = matches / len(common_cols)
|
| 133 |
+
|
| 134 |
+
# ββ Outlier score ββββββββββββββββββββββββββββββββββββββββββββ
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| 135 |
+
if "outlier_score" in scoring:
|
| 136 |
+
num_cols = gold.select_dtypes(include=[np.number]).columns
|
| 137 |
+
scores = []
|
| 138 |
+
for col in num_cols:
|
| 139 |
+
if col not in df.columns:
|
| 140 |
+
continue
|
| 141 |
+
gold_mean = gold[col].mean()
|
| 142 |
+
gold_std = gold[col].std() + 1e-9
|
| 143 |
+
curr_col = pd.to_numeric(df[col], errors="coerce").dropna()
|
| 144 |
+
outliers = ((curr_col - gold_mean).abs() > 3 * gold_std).sum()
|
| 145 |
+
col_score = max(0.0, 1.0 - outliers / (len(curr_col) + 1e-9))
|
| 146 |
+
scores.append(col_score)
|
| 147 |
+
outlier_score = float(np.mean(scores)) if scores else 0.0
|
| 148 |
+
|
| 149 |
+
# ββ Schema score βββββββββββββββββββββββββββββββββββββββββββββ
|
| 150 |
+
if "schema_score" in scoring:
|
| 151 |
+
gold_cols = list(gold.columns)
|
| 152 |
+
curr_cols = list(df.columns)
|
| 153 |
+
matched = sum(1 for c in gold_cols if c in curr_cols)
|
| 154 |
+
schema_score = matched / len(gold_cols) if gold_cols else 0.0
|
| 155 |
+
|
| 156 |
+
# ββ Penalty for too many steps βββββββββββββββββββββββββββββββ
|
| 157 |
+
step_ratio = self.step_count / self.max_steps
|
| 158 |
+
if step_ratio > 0.8:
|
| 159 |
+
penalty = 0.05
|
| 160 |
+
|
| 161 |
+
# ββ Weighted total βββββββββββββββββββββββββββββββββββββββββββ
|
| 162 |
+
weights = {
|
| 163 |
+
"duplicate_score": scoring.get("duplicate_score", 0.0),
|
| 164 |
+
"missing_score": scoring.get("missing_score", 0.0),
|
| 165 |
+
"dtype_score": scoring.get("dtype_score", 0.0),
|
| 166 |
+
"outlier_score": scoring.get("outlier_score", 0.0),
|
| 167 |
+
"schema_score": scoring.get("schema_score", 0.0),
|
| 168 |
+
}
|
| 169 |
+
component_scores = {
|
| 170 |
+
"duplicate_score": dup_score,
|
| 171 |
+
"missing_score": missing_score,
|
| 172 |
+
"dtype_score": dtype_score,
|
| 173 |
+
"outlier_score": outlier_score,
|
| 174 |
+
"schema_score": schema_score,
|
| 175 |
+
}
|
| 176 |
+
total = sum(
|
| 177 |
+
component_scores[k] * w
|
| 178 |
+
for k, w in weights.items()
|
| 179 |
+
) - penalty
|
| 180 |
+
total = max(0.0, min(1.0, total))
|
| 181 |
+
|
| 182 |
+
return Reward(
|
| 183 |
+
total=round(total, 4),
|
| 184 |
+
duplicate_score=round(dup_score, 4),
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| 185 |
+
missing_score=round(missing_score, 4),
|
| 186 |
+
dtype_score=round(dtype_score, 4),
|
| 187 |
+
outlier_score=round(outlier_score, 4),
|
| 188 |
+
schema_score=round(schema_score, 4),
|
| 189 |
+
penalty=round(penalty, 4)
|
| 190 |
+
)
|
| 191 |
+
|
| 192 |
+
# βββββββββββββββββββββββββββββββββββββββββ
|
| 193 |
+
# OPERATIONS
|
| 194 |
+
# βββββββββββββββββββββββββββββββββββββββββ
|
| 195 |
+
|
| 196 |
+
def _op_remove_duplicates(self, params: Dict) -> str:
|
| 197 |
+
before = len(self.current_df)
|
| 198 |
+
subset = params.get("subset", None)
|
| 199 |
+
self.current_df = self.current_df.drop_duplicates(subset=subset)
|
| 200 |
+
self.current_df = self.current_df.reset_index(drop=True)
|
| 201 |
+
removed = before - len(self.current_df)
|
| 202 |
+
return f"Removed {removed} duplicate rows. Rows: {before} β {len(self.current_df)}"
|
| 203 |
+
|
| 204 |
+
def _op_fill_missing(self, params: Dict) -> str:
|
| 205 |
+
col = params.get("column")
|
| 206 |
+
strategy = params.get("strategy", "mean")
|
| 207 |
+
messages = []
|
| 208 |
+
|
| 209 |
+
cols_to_fill = [col] if col else list(self.current_df.columns)
|
| 210 |
+
for c in cols_to_fill:
|
| 211 |
+
if self.current_df[c].isnull().sum() == 0:
|
| 212 |
+
continue
|
| 213 |
+
if strategy == "mean":
|
| 214 |
+
numeric = pd.to_numeric(self.current_df[c], errors="coerce")
|
| 215 |
+
fill_val = numeric.mean()
|
| 216 |
+
self.current_df[c] = numeric.fillna(round(fill_val, 2))
|
| 217 |
+
elif strategy == "median":
|
| 218 |
+
numeric = pd.to_numeric(self.current_df[c], errors="coerce")
|
| 219 |
+
fill_val = numeric.median()
|
| 220 |
+
self.current_df[c] = numeric.fillna(fill_val)
|
| 221 |
+
elif strategy == "mode":
|
| 222 |
+
fill_val = self.current_df[c].mode()[0]
|
| 223 |
+
self.current_df[c] = self.current_df[c].fillna(fill_val)
|
| 224 |
+
elif strategy == "ffill":
|
| 225 |
+
self.current_df[c] = self.current_df[c].ffill()
|
| 226 |
+
else:
|
| 227 |
+
fill_val = strategy
|
| 228 |
+
self.current_df[c] = self.current_df[c].fillna(fill_val)
|
| 229 |
+
messages.append(f"{c}β{strategy}")
|
| 230 |
+
|
| 231 |
+
return f"Filled missing values: {', '.join(messages)}"
|
| 232 |
+
|
| 233 |
+
def _op_fix_dtype(self, params: Dict) -> str:
|
| 234 |
+
col = params.get("column")
|
| 235 |
+
dtype = params.get("dtype", "auto")
|
| 236 |
+
messages = []
|
| 237 |
+
|
| 238 |
+
cols_to_fix = [col] if col else list(self.current_df.columns)
|
| 239 |
+
for c in cols_to_fix:
|
| 240 |
+
try:
|
| 241 |
+
if dtype == "int" or dtype == "auto":
|
| 242 |
+
converted = pd.to_numeric(self.current_df[c], errors="coerce")
|
| 243 |
+
if converted.notna().all():
|
| 244 |
+
self.current_df[c] = converted.astype(int)
|
| 245 |
+
messages.append(f"{c}βint")
|
| 246 |
+
elif dtype == "float":
|
| 247 |
+
self.current_df[c] = pd.to_numeric(
|
| 248 |
+
self.current_df[c], errors="coerce"
|
| 249 |
+
)
|
| 250 |
+
messages.append(f"{c}βfloat")
|
| 251 |
+
elif dtype == "str":
|
| 252 |
+
self.current_df[c] = self.current_df[c].astype(str)
|
| 253 |
+
messages.append(f"{c}βstr")
|
| 254 |
+
except Exception as e:
|
| 255 |
+
messages.append(f"{c}βfailed({e})")
|
| 256 |
+
|
| 257 |
+
return f"Fixed dtypes: {', '.join(messages)}"
|
| 258 |
+
|
| 259 |
+
def _op_remove_outliers(self, params: Dict) -> str:
|
| 260 |
+
col = params.get("column")
|
| 261 |
+
method = params.get("method", "iqr")
|
| 262 |
+
before = len(self.current_df)
|
| 263 |
+
messages = []
|
| 264 |
+
|
| 265 |
+
cols = [col] if col else list(
|
| 266 |
+
self.current_df.select_dtypes(include=[np.number]).columns
|
| 267 |
+
)
|
| 268 |
+
for c in cols:
|
| 269 |
+
series = pd.to_numeric(self.current_df[c], errors="coerce")
|
| 270 |
+
if method == "iqr":
|
| 271 |
+
Q1 = series.quantile(0.25)
|
| 272 |
+
Q3 = series.quantile(0.75)
|
| 273 |
+
IQR = Q3 - Q1
|
| 274 |
+
mask = (series >= Q1 - 1.5 * IQR) & (series <= Q3 + 1.5 * IQR)
|
| 275 |
+
self.current_df = self.current_df[mask | series.isna()]
|
| 276 |
+
elif method == "zscore":
|
| 277 |
+
mean = series.mean()
|
| 278 |
+
std = series.std() + 1e-9
|
| 279 |
+
mask = ((series - mean).abs() <= 3 * std)
|
| 280 |
+
self.current_df = self.current_df[mask | series.isna()]
|
| 281 |
+
self.current_df = self.current_df.reset_index(drop=True)
|
| 282 |
+
messages.append(c)
|
| 283 |
+
|
| 284 |
+
removed = before - len(self.current_df)
|
| 285 |
+
return f"Removed {removed} outlier rows from: {', '.join(messages)}"
|
| 286 |
+
|
| 287 |
+
def _op_rename_columns(self, params: Dict) -> str:
|
| 288 |
+
mapping = params.get("mapping", {})
|
| 289 |
+
if not mapping:
|
| 290 |
+
# Auto snake_case
|
| 291 |
+
new_names = {
|
| 292 |
+
col: col.lower().replace(" ", "_")
|
| 293 |
+
for col in self.current_df.columns
|
| 294 |
+
}
|
| 295 |
+
self.current_df = self.current_df.rename(columns=new_names)
|
| 296 |
+
return f"Auto renamed columns to snake_case: {list(new_names.values())}"
|
| 297 |
+
self.current_df = self.current_df.rename(columns=mapping)
|
| 298 |
+
return f"Renamed columns: {mapping}"
|
| 299 |
+
|
| 300 |
+
def _op_validate_schema(self, params: Dict) -> str:
|
| 301 |
+
gold_cols = list(self.gold_df.columns)
|
| 302 |
+
curr_cols = list(self.current_df.columns)
|
| 303 |
+
missing = [c for c in gold_cols if c not in curr_cols]
|
| 304 |
+
extra = [c for c in curr_cols if c not in gold_cols]
|
| 305 |
+
if not missing and not extra:
|
| 306 |
+
return "Schema valid! All columns match gold standard."
|
| 307 |
+
msg = []
|
| 308 |
+
if missing:
|
| 309 |
+
msg.append(f"Missing columns: {missing}")
|
| 310 |
+
if extra:
|
| 311 |
+
msg.append(f"Extra columns: {extra}")
|
| 312 |
+
return "Schema issues: " + " | ".join(msg)
|
| 313 |
+
|
| 314 |
+
# βββββββββββββββββββββββββββββββββββββββββ
|
| 315 |
+
# OPENENV API
|
| 316 |
+
# βββββββββββββββββββββββββββββββββββββββββ
|
| 317 |
+
|
| 318 |
+
def reset(self) -> StepResult:
|
| 319 |
+
self._load_datasets()
|
| 320 |
+
self.step_count = 0
|
| 321 |
+
self.done = False
|
| 322 |
+
self.reward_history = []
|
| 323 |
+
|
| 324 |
+
obs = self._get_observation("Environment reset. Start cleaning!")
|
| 325 |
+
reward = Reward(total=0.0)
|
| 326 |
+
|
| 327 |
+
return StepResult(
|
| 328 |
+
observation=obs,
|
| 329 |
+
reward=reward,
|
| 330 |
+
done=False,
|
| 331 |
+
info={"task_id": self.task_id, "max_steps": self.max_steps}
|
| 332 |
+
)
|
| 333 |
+
|
| 334 |
+
def step(self, action: Action) -> StepResult:
|
| 335 |
+
if self.done:
|
| 336 |
+
obs = self._get_observation("Episode already done. Call reset().")
|
| 337 |
+
return StepResult(
|
| 338 |
+
observation=obs,
|
| 339 |
+
reward=Reward(total=0.0),
|
| 340 |
+
done=True,
|
| 341 |
+
info={"warning": "Episode already done"}
|
| 342 |
+
)
|
| 343 |
+
|
| 344 |
+
self.step_count += 1
|
| 345 |
+
op = action.operation
|
| 346 |
+
params = action.parameters
|
| 347 |
+
message = ""
|
| 348 |
+
|
| 349 |
+
# ββ Route operation ββββββββββββββββββββββββββββββββββββββββββ
|
| 350 |
+
try:
|
| 351 |
+
if op == "remove_duplicates":
|
| 352 |
+
message = self._op_remove_duplicates(params)
|
| 353 |
+
elif op == "fill_missing":
|
| 354 |
+
message = self._op_fill_missing(params)
|
| 355 |
+
elif op == "fix_dtype":
|
| 356 |
+
message = self._op_fix_dtype(params)
|
| 357 |
+
elif op == "remove_outliers":
|
| 358 |
+
message = self._op_remove_outliers(params)
|
| 359 |
+
elif op == "rename_columns":
|
| 360 |
+
message = self._op_rename_columns(params)
|
| 361 |
+
elif op == "validate_schema":
|
| 362 |
+
message = self._op_validate_schema(params)
|
| 363 |
+
elif op == "finish":
|
| 364 |
+
message = "Agent called finish."
|
| 365 |
+
self.done = True
|
| 366 |
+
else:
|
| 367 |
+
message = f"Unknown operation: {op}. No changes made."
|
| 368 |
+
except Exception as e:
|
| 369 |
+
message = f"Operation failed: {str(e)}"
|
| 370 |
+
|
| 371 |
+
# ββ Check max steps ββββββββββββββββββββββββββββββββββββββββββ
|
| 372 |
+
if self.step_count >= self.max_steps:
|
| 373 |
+
self.done = True
|
| 374 |
+
message += " | Max steps reached."
|
| 375 |
+
|
| 376 |
+
reward = self._compute_reward()
|
| 377 |
+
self.reward_history.append(reward.total)
|
| 378 |
+
obs = self._get_observation(message)
|
| 379 |
+
|
| 380 |
+
return StepResult(
|
| 381 |
+
observation=obs,
|
| 382 |
+
reward=reward,
|
| 383 |
+
done=self.done,
|
| 384 |
+
info={
|
| 385 |
+
"step": self.step_count,
|
| 386 |
+
"operation": op,
|
| 387 |
+
"reward_history": self.reward_history
|
| 388 |
+
}
|
| 389 |
+
)
|
| 390 |
+
|
| 391 |
+
def state(self) -> Dict[str, Any]:
|
| 392 |
+
if self.current_df is None:
|
| 393 |
+
return {"status": "not initialized β call reset() first"}
|
| 394 |
+
return {
|
| 395 |
+
"task_id": self.task_id,
|
| 396 |
+
"step": self.step_count,
|
| 397 |
+
"done": self.done,
|
| 398 |
+
"shape": list(self.current_df.shape),
|
| 399 |
+
"columns": list(self.current_df.columns),
|
| 400 |
+
"missing_values": self.current_df.isnull().sum().to_dict(),
|
| 401 |
+
"duplicate_count": int(self.current_df.duplicated().sum()),
|
| 402 |
+
"reward_history": self.reward_history,
|
| 403 |
+
"dtypes": {c: str(t) for c, t in self.current_df.dtypes.items()}
|
| 404 |
+
}
|