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Update main.py
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main.py
CHANGED
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@@ -160,13 +160,15 @@ class WatermelonProcessor:
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@staticmethod
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def contour_centroid(contour):
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M = cv2.moments(contour)
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if M["m00"] == 0:
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return np.array([M["m10"] / M["m00"], M["m01"] / M["m00"]], dtype=np.float32)
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@staticmethod
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def mask_centroid(mask):
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M = cv2.moments(mask)
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if M["m00"] == 0:
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return np.array([M["m10"] / M["m00"], M["m01"] / M["m00"]], dtype=np.float32)
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@staticmethod
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@@ -178,7 +180,8 @@ class WatermelonProcessor:
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@staticmethod
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def flesh_envelope_mask(flesh_combined):
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ys, xs = np.where(flesh_combined > 0)
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if len(xs) < MIN_FLESH_PIXELS_FOR_FALLBACK:
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pts = np.column_stack([xs, ys]).astype(np.int32)
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hull = cv2.convexHull(pts.reshape(-1, 1, 2))
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@@ -196,7 +199,7 @@ class WatermelonProcessor:
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@staticmethod
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def choose_target_rind_mask(rind_mask, flesh_combined):
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warnings =[]
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flesh_area = cv2.countNonZero(flesh_combined)
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cnts, _ = cv2.findContours(rind_mask, cv2.RETR_EXTERNAL, cv2.CHAIN_APPROX_NONE)
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@@ -206,7 +209,7 @@ class WatermelonProcessor:
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return rind_mask, "missing", None, ["No whole-watermelon mask and not enough flesh mask for fallback."]
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return envelope, "flesh_envelope", 1.0, ["No whole-watermelon mask; estimated perimeter from flesh masks."]
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scored =[]
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for cnt in cnts:
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temp = WatermelonProcessor.draw_single_contour(rind_mask.shape, cnt)
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overlap = cv2.countNonZero(cv2.bitwise_and(temp, flesh_combined))
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@@ -272,23 +275,32 @@ class WatermelonProcessor:
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@staticmethod
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def split_asymmetry(region_mask, midline, thickness=5):
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if midline is None or len(midline) < 2 or cv2.countNonZero(region_mask) == 0:
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split_mask = region_mask.copy()
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cv2.polylines(split_mask, [midline.astype(np.int32)], False, 0, thickness)
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n_labels, _, stats, _ = cv2.connectedComponentsWithStats((split_mask > 0).astype(np.uint8), connectivity=8)
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if n_labels <= 2:
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areas = sorted([int(stats[i, cv2.CC_STAT_AREA]) for i in range(1, n_labels)], reverse=True)
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if len(areas) < 2 or areas[0] + areas[1] == 0:
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return float(abs(areas[0] - areas[1]) / (areas[0] + areas[1]))
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@staticmethod
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def midline_curvature_score(midline):
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if midline is None or len(midline) < 3:
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diffs = np.diff(midline.astype(np.float32), axis=0)
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path_len = float(np.sum(np.linalg.norm(diffs, axis=1)))
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chord_len = float(np.linalg.norm(midline[-1] - midline[0]))
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if chord_len <= 1e-6:
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return float(max(0.0, (path_len / chord_len) - 1.0))
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@staticmethod
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@@ -325,61 +337,56 @@ class WatermelonProcessor:
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return (bins[:-1] + bins[1:])/2.0, median_filter(raw_r, size=7, mode="wrap"), (cx, cy), best_cnt
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@staticmethod
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def
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h, w =
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if len(rind_cnt) > 5
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rot_angle = angle if ma < Ma else angle + 90
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else: rot_angle = 0
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m_rot = cv2.getRotationMatrix2D((cx, cy), rot_angle, 1.0)
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m_inv = cv2.getRotationMatrix2D((cx, cy), -rot_angle, 1.0)
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gap_points =[]
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if len(
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if len(white_px) >= 2:
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first, last = white_px[0], white_px[-1]
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blanks_in_between = np.where(row[first:last] == 0)[0] + first
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if len(blanks_in_between) > 0:
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gap_points.append([y, np.median(blanks_in_between)])
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gap_points = np.array(gap_points)
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if len(gap_points) > 10:
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y_span, y_mean = max(
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def parabola(y_n, a, b, c): return a * (y_n**2) + b * y_n + c
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max_bend = w * 0.08
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try:
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popt_mid, _ = curve_fit(
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ys_extrap = np.linspace(0, h, 500)
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xs_extrap = parabola((ys_extrap - y_mean)
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pts_rot = np.vstack([xs_extrap, ys_extrap, np.ones_like(
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else:
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ys_extrap = np.linspace(0, h, 500)
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pts_rot = np.vstack([xs_extrap, ys_extrap, np.ones_like(xs_extrap)])
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pts_orig = (m_inv @ pts_rot).T
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pred_cnt_cv =
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final_line.append(pt)
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return np.array(final_line)
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def process_image(self, image: np.ndarray, source_name: str, scale_ratio: float, apply_smoothing: bool = True) -> ProcessResult:
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timings = {}
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stage_t = time.perf_counter()
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@@ -399,8 +406,10 @@ class WatermelonProcessor:
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**extra,
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)
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warnings =[]
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if image is None:
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h, w = image.shape[:2]
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# --- 1. CALIBRATION & SCALING ---
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@@ -422,12 +431,14 @@ class WatermelonProcessor:
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tgt24_corr = sample_24_patches(tgt_warped_corr)
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dE_final = float(np.mean(compute_deltaE_00(tgt24_corr, self.ref24)))
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except Exception as e:
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if cm_per_px is None:
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print(f"Calibration skipped for {source_name}: {e}")
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mark("calibration")
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# --- 2. YOLO INFERENCE ---
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results = self.model(image, conf=0.25, retina_masks=True, verbose=False)
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mark("yolo_inference")
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@@ -436,29 +447,38 @@ class WatermelonProcessor:
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flesh_r_contours = []
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if results[0].masks is None:
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return fail(
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for mask_data, cls in zip(results[0].masks.xy, results[0].boxes.cls):
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contour = np.array(mask_data, dtype=np.int32)
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c_id = int(cls)
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if c_id == 0:
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elif c_id ==
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if len(flesh_l_contours) >= 2 and len(flesh_r_contours) == 0:
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flesh_l_contours.sort(key=lambda cnt: cv2.moments(cnt)["m10"] / (cv2.moments(cnt)["m00"] + 1e-5))
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flesh_r_contours.append(flesh_l_contours.pop())
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warnings.append("Only flesh_left detected; split by x-position.")
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elif len(flesh_r_contours) >= 2 and len(flesh_l_contours) == 0:
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flesh_r_contours.sort(key=lambda cnt: cv2.moments(cnt)["m10"] / (cv2.moments(cnt)["m00"] + 1e-5))
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flesh_l_contours.append(flesh_r_contours.pop(0))
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warnings.append("Only flesh_right detected; split by x-position.")
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flesh_l_m, flesh_r_m = np.zeros((h, w), dtype=np.uint8), np.zeros((h, w), dtype=np.uint8)
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for cnt in flesh_l_contours:
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flesh_combined = cv2.bitwise_or(flesh_l_m, flesh_r_m)
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target_rind_mask, rind_source, rind_overlap_ratio, rind_warnings = self.choose_target_rind_mask(rind_mask, flesh_combined)
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# --- 3. FIT & EXTRACTION ---
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perimeter_data = self.get_stable_perimeter_data(target_rind_mask, flesh_combined)
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if perimeter_data is None:
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return fail(
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t_data, r_raw, (cx, cy), rind_cnt = perimeter_data
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if apply_smoothing:
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scale = np.mean(r_raw)
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if scale <= 0: return fail("Invalid perimeter scale.", rind_source=rind_source, rind_overlap_ratio=rind_overlap_ratio)
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try:
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popt, _ = curve_fit(
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self.watermelon_model, t_data, r_raw / scale,
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@@ -489,15 +514,13 @@ class WatermelonProcessor:
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mark("fit")
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return fail(f"Fit failed: {exc}", rind_source=rind_source, rind_overlap_ratio=rind_overlap_ratio)
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r2 = 1 - (np.sum((r_raw / scale - self.watermelon_model(t_data, *popt)) ** 2) / denom) if denom != 0 else None
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t_fit = np.linspace(-np.pi, np.pi, 500)
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r_fit = self.watermelon_model(t_fit, *popt) * scale
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fit_pts = np.array([[r * np.cos(t) + cx, cy - r * np.sin(t)] for t, r in zip(t_fit, r_fit)]
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else:
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# If Smoothing is OFF, bypass math and use the raw OpenCV contour
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r2 = None
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fit_pts = rind_cnt.reshape(-1, 2).astype(np.float32)
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width_px = float(np.max(fit_pts[:, 0]) - np.min(fit_pts[:, 0]))
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flesh_area_ratio = float(flesh_area_px / total_area_px) if total_area_px > 0 else None
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elongation_factor = self.elongation_from_points(fit_pts)
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circularity = float((4.0 * np.pi * total_area_px) / (perimeter_px ** 2)) if perimeter_px > 0 and total_area_px > 0 else None
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midline = self.get_ray_scan_midline(flesh_combined, rind_cnt, fit_pts, cx, cy)
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asymmetry_score = self.split_asymmetry(target_rind_mask, midline)
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flesh_asymmetry_score = self.split_asymmetry(flesh_combined, midline, thickness=3)
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midline_curvature = self.midline_curvature_score(midline)
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if cm_per_px is not None:
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measurement_unit
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area_scale = cm_per_px ** 2
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width_val
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else:
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measurement_unit
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orig_scale = 1.0 / scale_ratio
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area_scale = orig_scale ** 2
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width_val
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mark("fit")
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# --- 4. DRAWING ---
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img_base64 = None
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_, buffer = cv2.imencode(".jpg", output, [cv2.IMWRITE_JPEG_QUALITY, 85])
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img_base64 = base64.b64encode(buffer).decode("utf-8")
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mark("render")
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return ProcessResult(
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success=True, message="Success", r2_score=r2,
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width_val=width_val, height_val=height_val, perimeter_val=perimeter_val,
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total_area=total_area, flesh_area=flesh_area, flesh_area_ratio=flesh_area_ratio,
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elongation_factor=elongation_factor, circularity=circularity,
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asymmetry_score=asymmetry_score, flesh_asymmetry_score=flesh_asymmetry_score,
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midline_curvature=midline_curvature,
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rind_source=rind_source, rind_overlap_ratio=rind_overlap_ratio,
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warnings=warnings or None, timings_ms=timings
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)
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app = FastAPI()
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app.add_middleware(
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@app.post("/process_single")
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async def process_single(file: UploadFile = File(...), include_image: bool = Query(True), apply_smoothing: bool = Query(True)):
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request_t = time.perf_counter()
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contents
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try:
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contents = await file.read()
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if not contents:
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img = cv2.imdecode(np.frombuffer(contents, np.uint8), cv2.IMREAD_COLOR)
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if img is None:
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scale_ratio = 1.0
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h, w = img.shape[:2]
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scale_ratio = MAX_IMAGE_SIZE / float(max(h, w))
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img = cv2.resize(img, (int(w * scale_ratio), int(h * scale_ratio)), interpolation=cv2.INTER_AREA)
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res = processor.process_image(img, file.filename, scale_ratio, apply_smoothing=apply_smoothing)
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res.processing_ms = int(round((time.perf_counter() - request_t) * 1000))
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return res.__dict__
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except Exception as exc:
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traceback.print_exc()
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finally:
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del img, contents
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@staticmethod
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def contour_centroid(contour):
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M = cv2.moments(contour)
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if M["m00"] == 0:
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return None
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return np.array([M["m10"] / M["m00"], M["m01"] / M["m00"]], dtype=np.float32)
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@staticmethod
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def mask_centroid(mask):
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M = cv2.moments(mask)
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if M["m00"] == 0:
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return None
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return np.array([M["m10"] / M["m00"], M["m01"] / M["m00"]], dtype=np.float32)
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@staticmethod
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@staticmethod
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def flesh_envelope_mask(flesh_combined):
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ys, xs = np.where(flesh_combined > 0)
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if len(xs) < MIN_FLESH_PIXELS_FOR_FALLBACK:
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return None
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pts = np.column_stack([xs, ys]).astype(np.int32)
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hull = cv2.convexHull(pts.reshape(-1, 1, 2))
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@staticmethod
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def choose_target_rind_mask(rind_mask, flesh_combined):
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warnings = []
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flesh_area = cv2.countNonZero(flesh_combined)
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cnts, _ = cv2.findContours(rind_mask, cv2.RETR_EXTERNAL, cv2.CHAIN_APPROX_NONE)
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return rind_mask, "missing", None, ["No whole-watermelon mask and not enough flesh mask for fallback."]
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return envelope, "flesh_envelope", 1.0, ["No whole-watermelon mask; estimated perimeter from flesh masks."]
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scored = []
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for cnt in cnts:
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temp = WatermelonProcessor.draw_single_contour(rind_mask.shape, cnt)
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| 215 |
overlap = cv2.countNonZero(cv2.bitwise_and(temp, flesh_combined))
|
|
|
|
| 275 |
|
| 276 |
@staticmethod
|
| 277 |
def split_asymmetry(region_mask, midline, thickness=5):
|
| 278 |
+
if midline is None or len(midline) < 2 or cv2.countNonZero(region_mask) == 0:
|
| 279 |
+
return None
|
| 280 |
+
|
| 281 |
split_mask = region_mask.copy()
|
| 282 |
cv2.polylines(split_mask, [midline.astype(np.int32)], False, 0, thickness)
|
| 283 |
n_labels, _, stats, _ = cv2.connectedComponentsWithStats((split_mask > 0).astype(np.uint8), connectivity=8)
|
| 284 |
+
if n_labels <= 2:
|
| 285 |
+
return None
|
| 286 |
|
| 287 |
areas = sorted([int(stats[i, cv2.CC_STAT_AREA]) for i in range(1, n_labels)], reverse=True)
|
| 288 |
+
if len(areas) < 2 or areas[0] + areas[1] == 0:
|
| 289 |
+
return None
|
| 290 |
+
|
| 291 |
return float(abs(areas[0] - areas[1]) / (areas[0] + areas[1]))
|
| 292 |
|
| 293 |
@staticmethod
|
| 294 |
def midline_curvature_score(midline):
|
| 295 |
+
if midline is None or len(midline) < 3:
|
| 296 |
+
return None
|
| 297 |
+
|
| 298 |
diffs = np.diff(midline.astype(np.float32), axis=0)
|
| 299 |
path_len = float(np.sum(np.linalg.norm(diffs, axis=1)))
|
| 300 |
chord_len = float(np.linalg.norm(midline[-1] - midline[0]))
|
| 301 |
+
if chord_len <= 1e-6:
|
| 302 |
+
return None
|
| 303 |
+
|
| 304 |
return float(max(0.0, (path_len / chord_len) - 1.0))
|
| 305 |
|
| 306 |
@staticmethod
|
|
|
|
| 337 |
return (bins[:-1] + bins[1:])/2.0, median_filter(raw_r, size=7, mode="wrap"), (cx, cy), best_cnt
|
| 338 |
|
| 339 |
@staticmethod
|
| 340 |
+
def get_dual_mask_midline(f_left, f_right, rind_cnt, pred_cnt, cx, cy):
|
| 341 |
+
h, w = f_left.shape
|
| 342 |
+
_, (ma, Ma), angle = cv2.fitEllipse(rind_cnt) if len(rind_cnt) > 5 else (None, (0,0), 0)
|
| 343 |
+
rot_angle = angle if ma < Ma else angle + 90
|
|
|
|
|
|
|
| 344 |
|
| 345 |
m_rot = cv2.getRotationMatrix2D((cx, cy), rot_angle, 1.0)
|
| 346 |
m_inv = cv2.getRotationMatrix2D((cx, cy), -rot_angle, 1.0)
|
| 347 |
+
l_rot, r_rot = cv2.warpAffine(f_left, m_rot, (w, h)), cv2.warpAffine(f_right, m_rot, (w, h))
|
| 348 |
+
|
| 349 |
+
l_idx, r_idx = np.where(l_rot > 0)[1], np.where(r_rot > 0)[1]
|
| 350 |
+
if len(l_idx) > 0 and len(r_idx) > 0:
|
| 351 |
+
if np.mean(l_idx) > np.mean(r_idx):
|
| 352 |
+
l_rot, r_rot = r_rot, l_rot
|
| 353 |
|
| 354 |
gap_points =[]
|
| 355 |
+
y_l, y_r = np.where(l_rot > 0)[0], np.where(r_rot > 0)[0]
|
| 356 |
+
if len(y_l) > 0 and len(y_r) > 0:
|
| 357 |
+
for y in range(max(np.min(y_l), np.min(y_r)), min(np.max(y_l), np.max(y_r))):
|
| 358 |
+
row_l, row_r = np.where(l_rot[y, :] > 0)[0], np.where(r_rot[y, :] > 0)[0]
|
| 359 |
+
if len(row_l) > 0 and len(row_r) > 0:
|
| 360 |
+
gap_points.append([y, (row_l[-1] + row_r[0]) / 2.0])
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 361 |
|
| 362 |
gap_points = np.array(gap_points)
|
| 363 |
if len(gap_points) > 10:
|
| 364 |
+
y_min_g, y_max_g = np.min(gap_points[:, 0]), np.max(gap_points[:, 0])
|
| 365 |
+
y_span, y_mean = max(y_max_g - y_min_g, 1), (y_max_g + y_min_g) / 2.0
|
| 366 |
+
def parabola(y_n, a, b, c): return a*(y_n**2) + b*y_n + c
|
|
|
|
|
|
|
|
|
|
| 367 |
max_bend = w * 0.08
|
| 368 |
try:
|
| 369 |
+
popt_mid, _ = curve_fit(
|
| 370 |
+
parabola,
|
| 371 |
+
(gap_points[:,0]-y_mean)/y_span,
|
| 372 |
+
gap_points[:,1],
|
| 373 |
+
bounds=([-max_bend, -np.inf, -np.inf],[max_bend, np.inf, np.inf]),
|
| 374 |
+
max_nfev=1500,
|
| 375 |
+
)
|
| 376 |
+
except: popt_mid = [0.0, 0.0, cx]
|
| 377 |
+
|
| 378 |
ys_extrap = np.linspace(0, h, 500)
|
| 379 |
+
xs_extrap = parabola((ys_extrap - y_mean)/y_span, *popt_mid)
|
| 380 |
+
pts_rot = np.vstack([xs_extrap, ys_extrap, np.ones_like(ys_extrap)])
|
| 381 |
else:
|
| 382 |
ys_extrap = np.linspace(0, h, 500)
|
| 383 |
+
pts_rot = np.vstack([np.full_like(ys_extrap, cx), ys_extrap, np.ones_like(ys_extrap)])
|
|
|
|
| 384 |
|
| 385 |
pts_orig = (m_inv @ pts_rot).T
|
| 386 |
+
pred_cnt_cv = pred_cnt.reshape(-1, 1, 2).astype(np.int32)
|
| 387 |
+
return np.array([pt for pt in pts_orig if cv2.pointPolygonTest(pred_cnt_cv, (float(pt[0]), float(pt[1])), False) >= 0])
|
| 388 |
+
|
| 389 |
+
def process_image(self, image: np.ndarray, source_name: str, scale_ratio: float, include_image: bool = True, apply_smoothing: bool = True) -> ProcessResult:
|
|
|
|
|
|
|
|
|
|
|
|
|
| 390 |
timings = {}
|
| 391 |
stage_t = time.perf_counter()
|
| 392 |
|
|
|
|
| 406 |
**extra,
|
| 407 |
)
|
| 408 |
|
| 409 |
+
warnings = []
|
| 410 |
+
if image is None:
|
| 411 |
+
return ProcessResult(success=False, message="Could not decode image.", filename=source_name)
|
| 412 |
+
|
| 413 |
h, w = image.shape[:2]
|
| 414 |
|
| 415 |
# --- 1. CALIBRATION & SCALING ---
|
|
|
|
| 431 |
tgt24_corr = sample_24_patches(tgt_warped_corr)
|
| 432 |
dE_final = float(np.mean(compute_deltaE_00(tgt24_corr, self.ref24)))
|
| 433 |
except Exception as e:
|
| 434 |
+
if cm_per_px is None:
|
| 435 |
+
warnings.append("ColorChecker not found; dimensions are returned in original-image pixels.")
|
| 436 |
+
else:
|
| 437 |
+
warnings.append("Color correction skipped after ColorChecker detection; dimensions are still in centimeters.")
|
| 438 |
print(f"Calibration skipped for {source_name}: {e}")
|
| 439 |
mark("calibration")
|
| 440 |
|
| 441 |
+
# --- 2. YOLO INFERENCE (STRICTLY PARSING ALL 3 CLASSES) ---
|
| 442 |
results = self.model(image, conf=0.25, retina_masks=True, verbose=False)
|
| 443 |
mark("yolo_inference")
|
| 444 |
|
|
|
|
| 447 |
flesh_r_contours = []
|
| 448 |
|
| 449 |
if results[0].masks is None:
|
| 450 |
+
return fail(
|
| 451 |
+
"No masks detected.",
|
| 452 |
+
measurement_unit="cm" if cm_per_px is not None else "px",
|
| 453 |
+
scale_source="color_checker" if cm_per_px is not None else "original_pixels",
|
| 454 |
+
color_checker_found=checker_corners is not None,
|
| 455 |
+
)
|
| 456 |
|
| 457 |
for mask_data, cls in zip(results[0].masks.xy, results[0].boxes.cls):
|
| 458 |
contour = np.array(mask_data, dtype=np.int32)
|
| 459 |
c_id = int(cls)
|
| 460 |
+
if c_id == 0:
|
| 461 |
+
cv2.drawContours(rind_mask, [contour], -1, 255, -1)
|
| 462 |
+
elif c_id == 1:
|
| 463 |
+
flesh_l_contours.append(contour)
|
| 464 |
+
elif c_id == 2:
|
| 465 |
+
flesh_r_contours.append(contour)
|
| 466 |
+
|
| 467 |
+
# Failsafe: if YOLO missed one side but predicted multiple of the other.
|
| 468 |
if len(flesh_l_contours) >= 2 and len(flesh_r_contours) == 0:
|
| 469 |
flesh_l_contours.sort(key=lambda cnt: cv2.moments(cnt)["m10"] / (cv2.moments(cnt)["m00"] + 1e-5))
|
| 470 |
flesh_r_contours.append(flesh_l_contours.pop())
|
| 471 |
+
warnings.append("Only flesh_left was detected; split the two left detections into left/right by x-position.")
|
| 472 |
elif len(flesh_r_contours) >= 2 and len(flesh_l_contours) == 0:
|
| 473 |
flesh_r_contours.sort(key=lambda cnt: cv2.moments(cnt)["m10"] / (cv2.moments(cnt)["m00"] + 1e-5))
|
| 474 |
flesh_l_contours.append(flesh_r_contours.pop(0))
|
| 475 |
+
warnings.append("Only flesh_right was detected; split the two right detections into left/right by x-position.")
|
| 476 |
|
| 477 |
flesh_l_m, flesh_r_m = np.zeros((h, w), dtype=np.uint8), np.zeros((h, w), dtype=np.uint8)
|
| 478 |
+
for cnt in flesh_l_contours:
|
| 479 |
+
cv2.drawContours(flesh_l_m, [cnt], -1, 255, -1)
|
| 480 |
+
for cnt in flesh_r_contours:
|
| 481 |
+
cv2.drawContours(flesh_r_m, [cnt], -1, 255, -1)
|
| 482 |
|
| 483 |
flesh_combined = cv2.bitwise_or(flesh_l_m, flesh_r_m)
|
| 484 |
target_rind_mask, rind_source, rind_overlap_ratio, rind_warnings = self.choose_target_rind_mask(rind_mask, flesh_combined)
|
|
|
|
| 488 |
# --- 3. FIT & EXTRACTION ---
|
| 489 |
perimeter_data = self.get_stable_perimeter_data(target_rind_mask, flesh_combined)
|
| 490 |
if perimeter_data is None:
|
| 491 |
+
return fail(
|
| 492 |
+
"No stable perimeter.",
|
| 493 |
+
measurement_unit="cm" if cm_per_px is not None else "px",
|
| 494 |
+
scale_source="color_checker" if cm_per_px is not None else "original_pixels",
|
| 495 |
+
color_checker_found=checker_corners is not None,
|
| 496 |
+
rind_source=rind_source,
|
| 497 |
+
rind_overlap_ratio=rind_overlap_ratio,
|
| 498 |
+
)
|
| 499 |
|
| 500 |
t_data, r_raw, (cx, cy), rind_cnt = perimeter_data
|
| 501 |
+
scale = np.mean(r_raw)
|
| 502 |
+
if scale <= 0:
|
| 503 |
+
return fail("Invalid perimeter scale.", rind_source=rind_source, rind_overlap_ratio=rind_overlap_ratio)
|
| 504 |
+
|
| 505 |
if apply_smoothing:
|
|
|
|
|
|
|
| 506 |
try:
|
| 507 |
popt, _ = curve_fit(
|
| 508 |
self.watermelon_model, t_data, r_raw / scale,
|
|
|
|
| 514 |
mark("fit")
|
| 515 |
return fail(f"Fit failed: {exc}", rind_source=rind_source, rind_overlap_ratio=rind_overlap_ratio)
|
| 516 |
|
| 517 |
+
r2 = 1 - (np.sum((r_raw / scale - self.watermelon_model(t_data, *popt)) ** 2) / np.sum((r_raw / scale - 1) ** 2))
|
|
|
|
|
|
|
| 518 |
t_fit = np.linspace(-np.pi, np.pi, 500)
|
| 519 |
r_fit = self.watermelon_model(t_fit, *popt) * scale
|
| 520 |
+
fit_pts = np.array([[r * np.cos(t) + cx, cy - r * np.sin(t)] for t, r in zip(t_fit, r_fit)])
|
| 521 |
else:
|
|
|
|
| 522 |
r2 = None
|
| 523 |
+
# If smoothing is off, use the raw OpenCV contour for the perimeter
|
| 524 |
fit_pts = rind_cnt.reshape(-1, 2).astype(np.float32)
|
| 525 |
|
| 526 |
width_px = float(np.max(fit_pts[:, 0]) - np.min(fit_pts[:, 0]))
|
|
|
|
| 531 |
flesh_area_ratio = float(flesh_area_px / total_area_px) if total_area_px > 0 else None
|
| 532 |
elongation_factor = self.elongation_from_points(fit_pts)
|
| 533 |
circularity = float((4.0 * np.pi * total_area_px) / (perimeter_px ** 2)) if perimeter_px > 0 and total_area_px > 0 else None
|
| 534 |
+
midline = self.get_dual_mask_midline(flesh_l_m, flesh_r_m, rind_cnt, fit_pts, cx, cy)
|
|
|
|
|
|
|
| 535 |
asymmetry_score = self.split_asymmetry(target_rind_mask, midline)
|
| 536 |
flesh_asymmetry_score = self.split_asymmetry(flesh_combined, midline, thickness=3)
|
| 537 |
midline_curvature = self.midline_curvature_score(midline)
|
| 538 |
|
| 539 |
if cm_per_px is not None:
|
| 540 |
+
measurement_unit = "cm"
|
| 541 |
+
area_unit = "cm2"
|
| 542 |
+
scale_source = "color_checker"
|
| 543 |
area_scale = cm_per_px ** 2
|
| 544 |
+
width_val = float(width_px * cm_per_px)
|
| 545 |
+
height_val = float(height_px * cm_per_px)
|
| 546 |
+
perimeter_val = float(perimeter_px * cm_per_px)
|
| 547 |
else:
|
| 548 |
+
measurement_unit = "px"
|
| 549 |
+
area_unit = "px2"
|
| 550 |
+
scale_source = "original_pixels"
|
| 551 |
orig_scale = 1.0 / scale_ratio
|
| 552 |
area_scale = orig_scale ** 2
|
| 553 |
+
width_val = float(width_px * orig_scale)
|
| 554 |
+
height_val = float(height_px * orig_scale)
|
| 555 |
+
perimeter_val = float(perimeter_px * orig_scale)
|
| 556 |
+
total_area = float(total_area_px * area_scale)
|
| 557 |
+
flesh_area = float(flesh_area_px * area_scale)
|
| 558 |
mark("fit")
|
| 559 |
|
| 560 |
# --- 4. DRAWING ---
|
| 561 |
img_base64 = None
|
| 562 |
+
if include_image:
|
| 563 |
+
# Color coding: Green=chosen rind, Blue=Left Flesh, Red=Right Flesh.
|
| 564 |
+
output = image.copy().astype(np.float32)
|
| 565 |
+
alpha = 0.42
|
| 566 |
+
output[..., 0] = np.where(target_rind_mask > 0, output[..., 0] * (1 - alpha) + 0.0 * alpha, output[..., 0])
|
| 567 |
+
output[..., 1] = np.where(target_rind_mask > 0, output[..., 1] * (1 - alpha) + 170.0 * alpha, output[..., 1])
|
| 568 |
+
output[..., 2] = np.where(target_rind_mask > 0, output[..., 2] * (1 - alpha) + 0.0 * alpha, output[..., 2])
|
| 569 |
+
|
| 570 |
+
output[..., 0] = np.where(flesh_l_m > 0, output[..., 0] * (1 - alpha) + 255.0 * alpha, output[..., 0])
|
| 571 |
+
output[..., 1] = np.where(flesh_l_m > 0, output[..., 1] * (1 - alpha) + 0.0 * alpha, output[..., 1])
|
| 572 |
+
output[..., 2] = np.where(flesh_l_m > 0, output[..., 2] * (1 - alpha) + 0.0 * alpha, output[..., 2])
|
| 573 |
+
|
| 574 |
+
output[..., 0] = np.where(flesh_r_m > 0, output[..., 0] * (1 - alpha) + 0.0 * alpha, output[..., 0])
|
| 575 |
+
output[..., 1] = np.where(flesh_r_m > 0, output[..., 1] * (1 - alpha) + 0.0 * alpha, output[..., 1])
|
| 576 |
+
output[..., 2] = np.where(flesh_r_m > 0, output[..., 2] * (1 - alpha) + 255.0 * alpha, output[..., 2])
|
| 577 |
+
|
| 578 |
+
output = np.clip(output, 0, 255).astype(np.uint8)
|
| 579 |
+
|
| 580 |
+
if checker_corners is not None:
|
| 581 |
+
cv2.polylines(output, [np.int32(checker_corners)], True, (0, 165, 255), 4)
|
| 582 |
+
|
| 583 |
+
if len(midline) > 1:
|
| 584 |
+
cv2.polylines(output, [midline.astype(np.int32)], False, (0, 255, 255), 3)
|
| 585 |
+
pt_top = (int(midline[0][0]), int(midline[0][1]))
|
| 586 |
+
pt_bot = (int(midline[-1][0]), int(midline[-1][1]))
|
| 587 |
+
cv2.circle(output, pt_top, 10, (0, 0, 0), 2)
|
| 588 |
+
cv2.circle(output, pt_top, 8, (255, 255, 255), -1)
|
| 589 |
+
cv2.circle(output, pt_bot, 10, (0, 0, 0), 2)
|
| 590 |
+
cv2.circle(output, pt_bot, 8, (255, 255, 255), -1)
|
| 591 |
+
|
| 592 |
+
cv2.polylines(output, [fit_pts.astype(np.int32)], True, (0, 255, 0), 3)
|
| 593 |
+
_, buffer = cv2.imencode(".jpg", output, [cv2.IMWRITE_JPEG_QUALITY, 85])
|
| 594 |
+
img_base64 = base64.b64encode(buffer).decode("utf-8")
|
|
|
|
|
|
|
|
|
|
| 595 |
mark("render")
|
| 596 |
|
| 597 |
return ProcessResult(
|
| 598 |
+
success=True, message="Success", r2_score=float(r2),
|
| 599 |
width_val=width_val, height_val=height_val, perimeter_val=perimeter_val,
|
| 600 |
total_area=total_area, flesh_area=flesh_area, flesh_area_ratio=flesh_area_ratio,
|
| 601 |
elongation_factor=elongation_factor, circularity=circularity,
|
| 602 |
asymmetry_score=asymmetry_score, flesh_asymmetry_score=flesh_asymmetry_score,
|
| 603 |
+
midline_curvature=midline_curvature,
|
| 604 |
+
delta_e_initial=dE_initial, delta_e_final=dE_final,
|
| 605 |
+
image_base64=img_base64, filename=source_name,
|
| 606 |
+
measurement_unit=measurement_unit, area_unit=area_unit, scale_source=scale_source,
|
| 607 |
+
color_checker_found=checker_corners is not None,
|
| 608 |
rind_source=rind_source, rind_overlap_ratio=rind_overlap_ratio,
|
| 609 |
warnings=warnings or None, timings_ms=timings
|
| 610 |
)
|
| 611 |
|
| 612 |
+
|
| 613 |
app = FastAPI()
|
| 614 |
|
| 615 |
app.add_middleware(
|
|
|
|
| 624 |
@app.post("/process_single")
|
| 625 |
async def process_single(file: UploadFile = File(...), include_image: bool = Query(True), apply_smoothing: bool = Query(True)):
|
| 626 |
request_t = time.perf_counter()
|
| 627 |
+
contents = None
|
| 628 |
+
img = None
|
| 629 |
|
| 630 |
try:
|
| 631 |
contents = await file.read()
|
| 632 |
if not contents:
|
| 633 |
+
res = ProcessResult(success=False, message="Empty upload.", filename=file.filename)
|
| 634 |
+
res.processing_ms = int(round((time.perf_counter() - request_t) * 1000))
|
| 635 |
+
return res.__dict__
|
| 636 |
|
| 637 |
img = cv2.imdecode(np.frombuffer(contents, np.uint8), cv2.IMREAD_COLOR)
|
| 638 |
if img is None:
|
| 639 |
+
res = ProcessResult(success=False, message="Could not decode image.", filename=file.filename)
|
| 640 |
+
res.processing_ms = int(round((time.perf_counter() - request_t) * 1000))
|
| 641 |
+
return res.__dict__
|
| 642 |
|
| 643 |
scale_ratio = 1.0
|
| 644 |
h, w = img.shape[:2]
|
|
|
|
| 646 |
scale_ratio = MAX_IMAGE_SIZE / float(max(h, w))
|
| 647 |
img = cv2.resize(img, (int(w * scale_ratio), int(h * scale_ratio)), interpolation=cv2.INTER_AREA)
|
| 648 |
|
| 649 |
+
res = processor.process_image(img, file.filename, scale_ratio, include_image=include_image, apply_smoothing=apply_smoothing)
|
|
|
|
| 650 |
res.processing_ms = int(round((time.perf_counter() - request_t) * 1000))
|
| 651 |
return res.__dict__
|
| 652 |
|
| 653 |
except Exception as exc:
|
| 654 |
traceback.print_exc()
|
| 655 |
+
res = ProcessResult(
|
| 656 |
+
success=False,
|
| 657 |
+
message=f"Server error: {type(exc).__name__}: {exc}",
|
| 658 |
+
filename=file.filename,
|
| 659 |
+
processing_ms=int(round((time.perf_counter() - request_t) * 1000)),
|
| 660 |
+
)
|
| 661 |
+
return res.__dict__
|
| 662 |
|
| 663 |
finally:
|
| 664 |
del img, contents
|