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Update app.py
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app.py
CHANGED
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@@ -23,6 +23,7 @@ import io
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import base64
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from datetime import datetime
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import warnings
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warnings.filterwarnings('ignore')
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@@ -35,6 +36,35 @@ st.set_page_config(
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# Custom CSS for better styling
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# --- Helper Functions ---
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def display_error(e, context="An unexpected error occurred"):
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"""Displays a user-friendly error message."""
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@@ -246,29 +276,25 @@ def data_upload_page():
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else:
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st.info("👆 Please upload a CSV or Excel file (or separate train/test files) to get started.")
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X = df.drop(columns=[target_column])
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y = df[target_column].copy() # Use .copy() to avoid SettingWithCopyWarning
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#
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if y.isnull().any():
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if st.session_state.problem_type == "Classification":
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# If it's float and intended for classification, it might have been label encoded already or needs specific handling.
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# For now, let's assume if it's numeric and classification, it's likely already encoded or will be handled by LabelEncoder later.
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# If it's float due to NaNs, mode might be tricky. Let's ensure it's treated as object for mode for safety.
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y_imputer = SimpleImputer(strategy='most_frequent')
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y[:] = y_imputer.fit_transform(y.values.reshape(-1, 1)).ravel()
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else:
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y_imputer = SimpleImputer(strategy='most_frequent')
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y[:] = y_imputer.fit_transform(y.values.reshape(-1, 1)).ravel()
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elif st.session_state.problem_type == "Regression":
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y_imputer = SimpleImputer(strategy='mean')
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y[:] = y_imputer.fit_transform(y.values.reshape(-1, 1)).ravel()
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st.warning(f"NaN values found and imputed in the target column '{target_column}'.")
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#
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num_imputer = SimpleImputer(strategy='mean')
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cat_imputer = SimpleImputer(strategy='most_frequent')
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@@ -280,28 +306,92 @@ def preprocess_data(df, target_column, scaling_method="None"):
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if len(cat_cols) > 0:
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X[cat_cols] = cat_imputer.fit_transform(X[cat_cols])
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#
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# This function will just do imputation and encoding.
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# Encode categorical features
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le_dict_features = {}
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le = LabelEncoder()
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X[col] = le.fit_transform(X[col].astype(str))
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le_dict_features[col] = le
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st.session_state.le_dict.update(le_dict_features)
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# Ensure target y is correctly typed after imputation, especially for classification
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if st.session_state.problem_type == "Classification" and target_column in st.session_state.le_dict:
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# This might be redundant if LabelEncoder was applied after imputation, but good for safety
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pass # y should already be encoded if it was object type initially
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elif st.session_state.problem_type == "Classification" and y.dtype == 'float':
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# If y is float after mean imputation (e.g. binary 0/1 became float)
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# and it's for classification, convert to int if appropriate
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# This case should be rare if 'most_frequent' is used for classification target imputation
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# However, if it was numeric and became float due to NaNs, then imputed with mean (which is wrong for classification)
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# This indicates a logic flaw in imputation strategy selection above. Assuming 'most_frequent' was used.
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pass
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return X, y
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@@ -321,6 +411,11 @@ def model_training_page():
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target = st.session_state.target_column
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st.subheader("Training Configuration")
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col1, col2 = st.columns(2)
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# Disable test_size slider if separate test data is provided
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disable_test_size = st.session_state.get('source_data_type') == 'separate' and st.session_state.test_data is not None
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@@ -363,17 +458,40 @@ def model_training_page():
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if st.session_state.get('source_data_type') == 'separate' and st.session_state.train_data is not None:
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df_train_processed = st.session_state.train_data.copy()
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X_train, y_train = preprocess_data(df_train_processed, target)
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if st.session_state.test_data is not None:
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df_test_processed = st.session_state.test_data.copy()
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if target not in df_test_processed.columns:
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st.error(f"The target column '{target}' is missing from your test dataset. Please ensure both train and test datasets have the target column with the same name. Aborting training.")
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return
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else: # No test file, split train_data
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X_train, X_test, y_train, y_test = train_test_split(
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X_train, y_train, test_size=test_size, random_state=random_state,
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)
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else: # Single file upload
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df_processed = st.session_state.data.copy()
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X, y = preprocess_data(df_processed, target)
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X_train, X_test, y_train, y_test = train_test_split(
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X, y, test_size=test_size, random_state=random_state,
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stratify=(y if st.session_state.problem_type == "Classification" else None)
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@@ -1007,44 +1125,37 @@ pipeline = joblib.load('{file_name}{'.joblib' if 'Joblib' in export_format else
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st.info("⚠️ Note: When deploying this model in production, ensure all required libraries are installed in your deployment environment.")
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st.info("💡 Tip: Consider using Docker to create a consistent environment for model deployment.")
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st.subheader("🚀 Generate Flask API Endpoint")
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if st.button("Generate Flask API Code", key='generate_flask_api_button'):
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if st.session_state.trained_pipeline and st.session_state.X_train is not None:
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# Ensure file_name and ext are defined in this scope, might need to get them from session_state or re-evaluate
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# For simplicity, let's assume they are available or we use a default/placeholder
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# This part might need adjustment based on how file_name and ext are handled in the download section
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current_export_format = st.session_state.get('current_export_format', "Joblib (.joblib)") # Assuming this is stored or re-queried
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current_file_name = st.session_state.get('current_file_name', f"{st.session_state.best_model_info['name'].lower().replace(' ', '_')}_pipeline")
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ext_model = ".joblib" if "Joblib" in current_export_format else ".pkl"
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model_pipeline_name = f"{current_file_name}{ext_model}"
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flask_app_code = generate_flask_app_code(model_pipeline_name, list(st.session_state.X_train.columns), st.session_state.problem_type, is_xgboost, is_lightgbm, is_catboost)
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st.code(flask_app_code, language='python')
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b64_flask_app = base64.b64encode(flask_app_code.encode()).decode()
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href_flask_app = f'<a href="data:file/text;base64,{b64_flask_app}" download="flask_api_app.py">Download flask_api_app.py</a>'
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st.markdown(href_flask_app, unsafe_allow_html=True)
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st.success("Flask API code generated and ready for download!")
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st.info("Remember to install Flask (`pip install Flask`) and other necessary libraries (e.g., pandas, scikit-learn, joblib, and model-specific libraries) in the environment where you run this Flask app.")
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else:
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st.warning("Please ensure a model pipeline is trained and available, and training data (X_train) context exists.")
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import base64
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from datetime import datetime
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import warnings
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import featuretools as ft # Added featuretools import
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warnings.filterwarnings('ignore')
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)
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# Custom CSS for better styling
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st.markdown("""
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<style>
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.main-header {
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font-size: 2.5rem;
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color: #1f77b4;
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text-align: center;
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margin-bottom: 2rem;
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}
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.metric-card {
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background-color: #f0f2f6;
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padding: 1rem;
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border-radius: 0.5rem;
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margin: 0.5rem 0;
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box-shadow: 0 2px 4px rgba(0,0,0,0.1);
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}
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.success-message {
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background-color: #d4edda;
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color: #155724;
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padding: 1rem;
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border-radius: 0.5rem;
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border: 1px solid #c3e6cb;
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}
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.stButton>button {
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width: 100%;
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border-radius: 0.5rem;
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}
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</style>
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""", unsafe_allow_html=True)
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# --- Helper Functions ---
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def display_error(e, context="An unexpected error occurred"):
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"""Displays a user-friendly error message."""
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else:
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st.info("👆 Please upload a CSV or Excel file (or separate train/test files) to get started.")
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# Add a checkbox for enabling feature engineering in the sidebar or a relevant section
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# This might be better placed in the model_training_page or a new 'Feature Engineering' page/section
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# For now, let's assume we add it to the model_training_page configuration area.
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def preprocess_data(df, target_column, perform_feature_engineering=False):
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X = df.drop(columns=[target_column])
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y = df[target_column].copy() # Use .copy() to avoid SettingWithCopyWarning
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# --- Existing Imputation Logic for Target (y) ---
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if y.isnull().any():
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if st.session_state.problem_type == "Classification":
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y_imputer = SimpleImputer(strategy='most_frequent')
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y[:] = y_imputer.fit_transform(y.values.reshape(-1, 1)).ravel()
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elif st.session_state.problem_type == "Regression":
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y_imputer = SimpleImputer(strategy='mean')
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y[:] = y_imputer.fit_transform(y.values.reshape(-1, 1)).ravel()
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st.warning(f"NaN values found and imputed in the target column '{target_column}'.")
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# --- Existing Imputation Logic for Features (X) ---
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num_imputer = SimpleImputer(strategy='mean')
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cat_imputer = SimpleImputer(strategy='most_frequent')
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if len(cat_cols) > 0:
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X[cat_cols] = cat_imputer.fit_transform(X[cat_cols])
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# --- Existing Encoding Logic for Categorical Features (X) ---
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le_dict_features = {}
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original_object_cols = X.select_dtypes(include='object').columns # Re-select after imputation
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for col in original_object_cols: # Iterate over original object columns that are now imputed
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le = LabelEncoder()
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X[col] = le.fit_transform(X[col].astype(str))
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le_dict_features[col] = le
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st.session_state.le_dict.update(le_dict_features)
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# --- Automated Feature Engineering with Featuretools (New) ---
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if perform_feature_engineering:
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with st.spinner("Performing automated feature engineering..."):
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try:
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# Create an EntitySet
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es = ft.EntitySet(id='dataset')
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# Add the dataframe as an entity.
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# We need a unique index. If 'index' is not a column, reset index.
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if 'index' not in X.columns:
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X_ft = X.reset_index()
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entity_index = 'index'
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else: # if 'index' column already exists and is unique
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X_ft = X.copy()
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entity_index = 'index'
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if not X_ft[entity_index].is_unique:
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st.warning("Featuretools: 'index' column exists but is not unique. Resetting index for feature engineering.")
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X_ft = X.reset_index()
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entity_index = 'index'
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es = es.add_dataframe(
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dataframe_name='data_table',
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dataframe=X_ft,
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index=entity_index, # Ensure this column is unique
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# time_index='your_time_column_if_any', # Specify if you have a time index
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# logical_types={col: ft.variable_types.Categorical for col in cat_cols} # Optional: specify logical types
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)
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# Run Deep Feature Synthesis (DFS)
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# You might want to limit trans_primitives or agg_primitives for speed
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feature_matrix, feature_defs = ft.dfs(
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entityset=es,
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target_dataframe_name='data_table',
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# agg_primitives=["mean", "sum", "mode", "std", "max", "min", "count"], # Example primitives
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# trans_primitives=["day", "month", "year", "weekday", "time_since_previous"], # Example primitives
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max_depth=1, # Keep max_depth low initially for speed
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verbose=0, # Set to 1 for more output
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n_jobs=1 # Can be set to -1 to use all cores, but might be slow in Streamlit
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)
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st.success(f"Featuretools generated {feature_matrix.shape[1] - X_ft.shape[1]} new features.")
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# Featuretools might change column types (e.g., bool to int). Ensure consistency.
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# Also, it might re-introduce object types if not handled carefully with logical_types.
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# For simplicity, we'll try to convert new boolean columns to int and re-encode any new object columns.
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new_cols = [col for col in feature_matrix.columns if col not in X_ft.columns and col != entity_index]
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for col in new_cols:
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if feature_matrix[col].dtype == 'bool':
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feature_matrix[col] = feature_matrix[col].astype(int)
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elif feature_matrix[col].dtype == 'object':
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# This shouldn't happen often with default primitives if input was numeric/encoded
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# But if it does, re-encode
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le = LabelEncoder()
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feature_matrix[col] = le.fit_transform(feature_matrix[col].astype(str))
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st.session_state.le_dict[col] = le # Store new encoder
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st.info(f"Featuretools created new object column '{col}', which has been label encoded.")
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+
|
| 374 |
+
X = feature_matrix.copy()
|
| 375 |
+
if entity_index in X.columns and entity_index != 'index': # if original index was not 'index'
|
| 376 |
+
X = X.drop(columns=[entity_index])
|
| 377 |
+
elif entity_index == 'index' and 'index' in X.columns and X.index.name == 'index':
|
| 378 |
+
# If 'index' was created by reset_index and is now the df index, it's fine.
|
| 379 |
+
# If 'index' is a column AND the df index, drop the column to avoid duplication.
|
| 380 |
+
if 'index' in X.columns and X.index.name == 'index':
|
| 381 |
+
X = X.drop(columns=['index'])
|
| 382 |
+
|
| 383 |
+
st.write("Preview of data after feature engineering (first 5 rows, up to 10 columns):")
|
| 384 |
+
st.dataframe(X.head().iloc[:, :10])
|
| 385 |
+
|
| 386 |
+
except Exception as e:
|
| 387 |
+
st.error(f"Error during automated feature engineering: {e}")
|
| 388 |
+
st.warning("Skipping automated feature engineering due to error.")
|
| 389 |
+
|
| 390 |
+
# --- Existing Target Type Handling (y) ---
|
| 391 |
# Ensure target y is correctly typed after imputation, especially for classification
|
| 392 |
if st.session_state.problem_type == "Classification" and target_column in st.session_state.le_dict:
|
| 393 |
+
pass
|
|
|
|
|
|
|
| 394 |
elif st.session_state.problem_type == "Classification" and y.dtype == 'float':
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 395 |
pass
|
| 396 |
|
| 397 |
return X, y
|
|
|
|
| 411 |
target = st.session_state.target_column
|
| 412 |
|
| 413 |
st.subheader("Training Configuration")
|
| 414 |
+
# --- Add Feature Engineering Checkbox Here ---
|
| 415 |
+
perform_feature_engineering_cb = st.checkbox("Enable Automated Feature Engineering (Featuretools)", value=False, key='feature_engineering_cb',
|
| 416 |
+
help="Automatically generate new features. This can take time and significantly increase the number of features.")
|
| 417 |
+
st.session_state.perform_feature_engineering = perform_feature_engineering_cb
|
| 418 |
+
|
| 419 |
col1, col2 = st.columns(2)
|
| 420 |
# Disable test_size slider if separate test data is provided
|
| 421 |
disable_test_size = st.session_state.get('source_data_type') == 'separate' and st.session_state.test_data is not None
|
|
|
|
| 458 |
|
| 459 |
if st.session_state.get('source_data_type') == 'separate' and st.session_state.train_data is not None:
|
| 460 |
df_train_processed = st.session_state.train_data.copy()
|
| 461 |
+
X_train, y_train = preprocess_data(df_train_processed, target, st.session_state.get('perform_feature_engineering', False))
|
| 462 |
|
| 463 |
if st.session_state.test_data is not None:
|
| 464 |
df_test_processed = st.session_state.test_data.copy()
|
| 465 |
if target not in df_test_processed.columns:
|
| 466 |
st.error(f"The target column '{target}' is missing from your test dataset. Please ensure both train and test datasets have the target column with the same name. Aborting training.")
|
| 467 |
return
|
| 468 |
+
# Pass perform_feature_engineering=False for test data, as features should be derived from training data structure
|
| 469 |
+
# or apply transforms derived from training data. For simplicity now, we don't re-run DFS on test.
|
| 470 |
+
# A more robust approach would be to save feature definitions from training and apply to test.
|
| 471 |
+
X_test, y_test = preprocess_data(df_test_processed, target, perform_feature_engineering=False)
|
| 472 |
+
|
| 473 |
+
# Align columns after feature engineering (if it happened on train)
|
| 474 |
+
# This is crucial if featuretools was run on X_train only
|
| 475 |
+
if st.session_state.get('perform_feature_engineering', False):
|
| 476 |
+
st.write("Aligning columns between training and testing sets after feature engineering...")
|
| 477 |
+
train_cols = X_train.columns
|
| 478 |
+
test_cols = X_test.columns
|
| 479 |
+
|
| 480 |
+
# Columns in train but not in test (add them to test, fill with 0 or median/mode)
|
| 481 |
+
for col in train_cols:
|
| 482 |
+
if col not in test_cols:
|
| 483 |
+
X_test[col] = 0 # Or a more sophisticated fill value
|
| 484 |
+
|
| 485 |
+
# Columns in test but not in train (remove them from test)
|
| 486 |
+
# This case is less likely if feature engineering is only on train
|
| 487 |
+
cols_to_drop_from_test = [col for col in test_cols if col not in train_cols]
|
| 488 |
+
if cols_to_drop_from_test:
|
| 489 |
+
X_test = X_test.drop(columns=cols_to_drop_from_test)
|
| 490 |
+
|
| 491 |
+
# Ensure order is the same
|
| 492 |
+
X_test = X_test[train_cols]
|
| 493 |
+
st.info(f"Test set columns aligned. X_test shape: {X_test.shape}")
|
| 494 |
+
|
| 495 |
else: # No test file, split train_data
|
| 496 |
X_train, X_test, y_train, y_test = train_test_split(
|
| 497 |
X_train, y_train, test_size=test_size, random_state=random_state,
|
|
|
|
| 499 |
)
|
| 500 |
else: # Single file upload
|
| 501 |
df_processed = st.session_state.data.copy()
|
| 502 |
+
X, y = preprocess_data(df_processed, target, st.session_state.get('perform_feature_engineering', False))
|
| 503 |
X_train, X_test, y_train, y_test = train_test_split(
|
| 504 |
X, y, test_size=test_size, random_state=random_state,
|
| 505 |
stratify=(y if st.session_state.problem_type == "Classification" else None)
|
|
|
|
| 1125 |
st.info("⚠️ Note: When deploying this model in production, ensure all required libraries are installed in your deployment environment.")
|
| 1126 |
st.info("💡 Tip: Consider using Docker to create a consistent environment for model deployment.")
|
| 1127 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1128 |
|
| 1129 |
+
# --- Main Application ---
|
| 1130 |
+
def main():
|
| 1131 |
+
init_session_state()
|
| 1132 |
+
st.markdown('<h1 class="main-header">🤖 AutoML & Explainability Platform</h1>', unsafe_allow_html=True)
|
| 1133 |
|
| 1134 |
+
st.sidebar.title("⚙️ Workflow")
|
| 1135 |
+
page_options = ["Data Upload & Preview", "Model Training", "Model Comparison", "Explainability", "Model Export"]
|
| 1136 |
+
|
| 1137 |
+
# Handle auto-run navigation
|
| 1138 |
+
if st.session_state.get('auto_run_triggered') and st.session_state.target_column:
|
| 1139 |
+
st.session_state.auto_run_triggered = False # Reset trigger
|
| 1140 |
+
st.session_state.current_page = "Model Training"
|
| 1141 |
+
st.session_state.auto_run_triggered_for_training = True # Signal model_training_page to auto-start
|
| 1142 |
+
|
| 1143 |
+
if 'current_page' not in st.session_state:
|
| 1144 |
+
st.session_state.current_page = "Data Upload & Preview"
|
| 1145 |
+
|
| 1146 |
+
page = st.sidebar.radio("Navigate", page_options, key='navigation_radio', index=page_options.index(st.session_state.current_page))
|
| 1147 |
+
st.session_state.current_page = page # Update current page based on user selection
|
| 1148 |
+
|
| 1149 |
+
if page == "Data Upload & Preview":
|
| 1150 |
+
data_upload_page()
|
| 1151 |
+
elif page == "Model Training":
|
| 1152 |
+
model_training_page()
|
| 1153 |
+
elif page == "Model Comparison":
|
| 1154 |
+
model_comparison_page()
|
| 1155 |
+
elif page == "Explainability":
|
| 1156 |
+
explainability_page()
|
| 1157 |
+
elif page == "Model Export":
|
| 1158 |
+
model_export_page()
|
| 1159 |
+
|
| 1160 |
+
if __name__ == "__main__":
|
| 1161 |
+
main()
|