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Runtime error
Runtime error
Removing TextGeneration layer temporally
Browse files
app.py
CHANGED
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@@ -7,17 +7,8 @@ from gradio_huggingfacehub_search import HuggingfaceHubSearch
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from bertopic import BERTopic
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from bertopic.representation import (
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KeyBERTInspired,
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TextGeneration,
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)
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from umap import UMAP
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from torch import cuda, bfloat16
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from transformers import (
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BitsAndBytesConfig,
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AutoTokenizer,
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AutoModelForCausalLM,
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pipeline,
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)
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from prompts import REPRESENTATION_PROMPT
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from hdbscan import HDBSCAN
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from sklearn.feature_extraction.text import CountVectorizer
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@@ -26,7 +17,7 @@ from sentence_transformers import SentenceTransformer
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from dotenv import load_dotenv
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import os
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import spaces
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import gradio as gr
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@@ -38,8 +29,8 @@ logging.basicConfig(
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level=logging.INFO, format="%(asctime)s - %(name)s - %(levelname)s - %(message)s"
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)
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MAX_ROWS =
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CHUNK_SIZE =
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session = requests.Session()
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@@ -47,71 +38,7 @@ sentence_model = SentenceTransformer("all-MiniLM-L6-v2")
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keybert = KeyBERTInspired()
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vectorizer_model = CountVectorizer(stop_words="english")
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device = f"cuda:{cuda.current_device()}" if cuda.is_available() else "cpu"
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logging.info(device)
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bnb_config = BitsAndBytesConfig(
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load_in_4bit=True, # 4-bit quantization
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bnb_4bit_quant_type="nf4", # Normalized float 4
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bnb_4bit_use_double_quant=True, # Second quantization after the first
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bnb_4bit_compute_dtype=bfloat16, # Computation type
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)
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tokenizer = AutoTokenizer.from_pretrained(model_id)
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model = AutoModelForCausalLM.from_pretrained(
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model_id,
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trust_remote_code=True,
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quantization_config=bnb_config,
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device_map="auto",
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offload_folder="offload", # Offloading part of the model to CPU to save GPU memory
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)
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# Enable gradient checkpointing for memory efficiency during backprop?
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model.gradient_checkpointing_enable()
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generator = pipeline(
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model=model,
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tokenizer=tokenizer,
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task="text-generation",
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temperature=0.1,
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max_new_tokens=200, # Reduced max_new_tokens to limit memory consumption
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repetition_penalty=1.1,
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)
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llama2 = TextGeneration(generator, prompt=REPRESENTATION_PROMPT)
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representation_model = {
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"KeyBERT": keybert,
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"Llama2": llama2,
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}
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# TODO: It should be proporcional to the number of rows
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# For small datasets (1-200 rows) it worked fine with 2 neighbors
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N_NEIGHBORS = 15
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umap_model = UMAP(
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n_neighbors=N_NEIGHBORS,
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n_components=5,
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min_dist=0.0,
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metric="cosine",
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random_state=42,
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)
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hdbscan_model = HDBSCAN(
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min_cluster_size=N_NEIGHBORS,
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metric="euclidean",
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cluster_selection_method="eom",
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prediction_data=True,
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)
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reduce_umap_model = UMAP(
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n_neighbors=N_NEIGHBORS,
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n_components=2,
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min_dist=0.0,
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metric="cosine",
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random_state=42,
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)
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global_topic_model = None
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@@ -151,16 +78,30 @@ def get_docs_from_parquet(parquet_urls, column, offset, limit):
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return df[column].tolist()
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@spaces.GPU
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# TODO: Modify batch size to reduce memory consumption during embedding calculation, which value is better?
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def calculate_embeddings(docs):
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return sentence_model.encode(docs, show_progress_bar=True, batch_size=32)
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@spaces.GPU
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def fit_model(docs, embeddings):
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global global_topic_model
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new_model = BERTopic(
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"english",
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# Sub-models
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@@ -172,7 +113,7 @@ def fit_model(docs, embeddings):
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# Hyperparameters
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top_n_words=10,
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verbose=True,
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min_topic_size=
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)
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logging.info("Fitting new model")
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new_model.fit(docs, embeddings)
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@@ -183,6 +124,10 @@ def fit_model(docs, embeddings):
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logging.info("Global model updated")
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def generate_topics(dataset, config, split, column, nested_column):
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logging.info(
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f"Generating topics for {dataset} with config {config} {split} {column} {nested_column}"
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@@ -193,6 +138,16 @@ def generate_topics(dataset, config, split, column, nested_column):
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logging.info(f"Split rows: {split_rows}")
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limit = min(split_rows, MAX_ROWS)
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offset = 0
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rows_processed = 0
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@@ -201,8 +156,8 @@ def generate_topics(dataset, config, split, column, nested_column):
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reduced_embeddings_list = []
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topics_info, topic_plot = None, None
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yield (
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gr.DataFrame(interactive=False, visible=True),
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gr.Plot(visible=True),
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gr.Label(
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{f"⚙️ Generating topics {dataset}": rows_processed / limit}, visible=True
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),
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@@ -217,7 +172,7 @@ def generate_topics(dataset, config, split, column, nested_column):
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)
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embeddings = calculate_embeddings(docs)
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fit_model(docs, embeddings)
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if base_model is None:
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base_model = global_topic_model
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@@ -230,13 +185,6 @@ def generate_topics(dataset, config, split, column, nested_column):
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logging.info(f"The following topics are newly found: {new_topics}")
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base_model = updated_model
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repr_model_topics = {
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key: label[0][0].split("\n")[0]
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for key, label in base_model.get_topics(full=True)["Llama2"].items()
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}
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base_model.set_topic_labels(repr_model_topics)
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reduced_embeddings = reduce_umap_model.fit_transform(embeddings)
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reduced_embeddings_list.append(reduced_embeddings)
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@@ -249,8 +197,6 @@ def generate_topics(dataset, config, split, column, nested_column):
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custom_labels=True,
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)
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logging.info(f"Topics: {repr_model_topics}")
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rows_processed += len(docs)
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progress = min(rows_processed / limit, 1.0)
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logging.info(f"Progress: {progress} % - {rows_processed} of {limit}")
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from bertopic import BERTopic
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from bertopic.representation import (
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KeyBERTInspired,
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)
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from umap import UMAP
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from hdbscan import HDBSCAN
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from sklearn.feature_extraction.text import CountVectorizer
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from dotenv import load_dotenv
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import os
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# import spaces
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import gradio as gr
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level=logging.INFO, format="%(asctime)s - %(name)s - %(levelname)s - %(message)s"
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)
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MAX_ROWS = 5_000
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CHUNK_SIZE = 1_000
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session = requests.Session()
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keybert = KeyBERTInspired()
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vectorizer_model = CountVectorizer(stop_words="english")
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representation_model = KeyBERTInspired()
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global_topic_model = None
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return df[column].tolist()
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# @spaces.GPU
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def calculate_embeddings(docs):
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return sentence_model.encode(docs, show_progress_bar=True, batch_size=32)
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# @spaces.GPU
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def fit_model(docs, embeddings, n_neighbors):
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global global_topic_model
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umap_model = UMAP(
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n_neighbors=n_neighbors,
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n_components=5,
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min_dist=0.0,
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metric="cosine",
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random_state=42,
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)
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hdbscan_model = HDBSCAN(
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min_cluster_size=n_neighbors,
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metric="euclidean",
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cluster_selection_method="eom",
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prediction_data=True,
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)
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new_model = BERTopic(
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"english",
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# Sub-models
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# Hyperparameters
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top_n_words=10,
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verbose=True,
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min_topic_size=n_neighbors, # TODO: Should this value be coherent with N_NEIGHBORS?
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)
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logging.info("Fitting new model")
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new_model.fit(docs, embeddings)
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logging.info("Global model updated")
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def calculate_n_neighbors(n_rows):
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return max(n_rows // 20, 2)
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def generate_topics(dataset, config, split, column, nested_column):
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logging.info(
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f"Generating topics for {dataset} with config {config} {split} {column} {nested_column}"
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logging.info(f"Split rows: {split_rows}")
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limit = min(split_rows, MAX_ROWS)
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n_neighbors = calculate_n_neighbors(limit)
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reduce_umap_model = UMAP(
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n_neighbors=n_neighbors,
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n_components=2,
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min_dist=0.0,
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metric="cosine",
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random_state=42,
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)
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offset = 0
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rows_processed = 0
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reduced_embeddings_list = []
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topics_info, topic_plot = None, None
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yield (
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gr.DataFrame(value=[], interactive=False, visible=True),
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gr.Plot(value=None, visible=True),
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gr.Label(
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{f"⚙️ Generating topics {dataset}": rows_processed / limit}, visible=True
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),
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)
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embeddings = calculate_embeddings(docs)
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fit_model(docs, embeddings, n_neighbors)
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if base_model is None:
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base_model = global_topic_model
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logging.info(f"The following topics are newly found: {new_topics}")
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base_model = updated_model
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reduced_embeddings = reduce_umap_model.fit_transform(embeddings)
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reduced_embeddings_list.append(reduced_embeddings)
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custom_labels=True,
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)
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rows_processed += len(docs)
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progress = min(rows_processed / limit, 1.0)
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logging.info(f"Progress: {progress} % - {rows_processed} of {limit}")
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