Commit
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25188f0
1
Parent(s):
fb3df3b
simplifying imports
Browse files
app.py
CHANGED
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@@ -3,12 +3,9 @@ from idc_index import index
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from pathlib import Path
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import pydicom
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import pandas as pd
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# import pyarrow as pa
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# import pyarrow.parquet as pq
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from tempfile import TemporaryDirectory
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import os
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from pathlib import Path
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# import polars
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import pydicom.datadict as dd
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import shutil
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import papermill as pm
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@@ -65,11 +62,13 @@ if st.button("Run inference"):
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subprocess.run(["wget", "https://raw.githubusercontent.com/deepakri201/DICOMScanClassification_pw41/main/DICOMScanClassification_user_demo.ipynb"])
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pm.execute_notebook(
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)
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with open('output.ipynb', "rb") as f:
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st.download_button(
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from pathlib import Path
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import pydicom
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import pandas as pd
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from tempfile import TemporaryDirectory
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import os
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from pathlib import Path
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import pydicom.datadict as dd
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import shutil
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import papermill as pm
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subprocess.run(["wget", "https://raw.githubusercontent.com/deepakri201/DICOMScanClassification_pw41/main/DICOMScanClassification_user_demo.ipynb"])
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# pm.execute_notebook(
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# "DICOMScanClassification_user_demo.ipynb",
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# 'output.ipynb',
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# parameters = dict(SeriesInstanceUID=selected_series)
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# )
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subprocess.run(["papermill", "-p", "SeriesInstanceUID", selected_series, "DICOMScanClassification_user_demo.ipynb", "output.ipynb"])
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with open('output.ipynb', "rb") as f:
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st.download_button(
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