modifying package versions, updating Dockerfile

Dockerfile

@@ -1,15 +1,24 @@
 # Use an official Python runtime as a parent image
-FROM python:3.12.3
+FROM python:3.10.12
+
+RUN apt-get update && apt-get install -y unzip wget
+
+RUN wget https://github.com/rordenlab/dcm2niix/releases/latest/download/dcm2niix_lnx.zip && \
+    unzip dcm2niix_lnx.zip && \
+    cp dcm2niix /usr/local/bin
 
 # Set up a new user named "user" with user ID 1000
 RUN useradd -m -u 1000 user
 
+# Create the app directory and set the correct permissions
+RUN mkdir -p /home/user/app && chown -R user:user /home/user/app
+
 # Switch to the "user" user
 USER user
 
 # Set home to the user's home directory
 ENV HOME=/home/user \
-	PATH=/home/user/.local/bin:$PATH
+    PATH=/home/user/.local/bin:$PATH
 
 # Set the working directory to the user's home directory
 WORKDIR $HOME/app
@@ -23,20 +32,12 @@ COPY --chown=user . $HOME/app
 # Install any needed packages specified in requirements.txt
 RUN pip install --no-cache-dir -r requirements.txt
 
-RUN apt-get install unzip &&\ 
-    apt-get install wget 
-
-RUN wget https://github.com/rordenlab/dcm2niix/releases/latest/download/dcm2niix_lnx.zip &&\ 
-    unzip dcm2niix_lnx.zip &&\
-    cp dcm2niix /usr/local/bin
-
+# Download files as the non-root user
 RUN wget -O scaling_factors.csv https://github.com/deepakri201/DICOMScanClassification/releases/download/v1.0.0/scaling_factors.csv
-
-RUN wget -O metadata_only_model.zip  https://github.com/deepakri201/DICOMScanClassification/releases/download/v1.0.0/metadata_only_model.zip 
+RUN wget -O metadata_only_model.zip https://github.com/deepakri201/DICOMScanClassification/releases/download/v1.0.0/metadata_only_model.zip
 RUN wget -O images_only_model.zip https://github.com/deepakri201/DICOMScanClassification/releases/download/v1.0.0/images_only_model.zip
 RUN wget -O images_and_metadata_model.zip https://github.com/deepakri201/DICOMScanClassification/releases/download/v1.0.0/images_and_metadata_model.zip
 
-
 RUN unzip "metadata_only_model.zip" -d "metadata_only_model/"
 RUN unzip "images_only_model.zip" -d "images_only_model/"
 RUN unzip "images_and_metadata_model.zip" -d "images_and_metadata_model/"
@@ -54,4 +55,4 @@ maxMessageSize = 2000\n\
 EXPOSE 8501
 
 # Run filter_data_app.py when the container launches
-CMD streamlit run app.py
+CMD streamlit run app.py

requirements.txt

@@ -1,14 +1,16 @@
-pydicom
-polars
-pyarrow
+pydicom==2.4.4
 duckdb
-pandas
+pandas==2.0.3
 streamlit
-idc-index
-SimpleITK 
-tensorflow
+idc-index==0.5.9
+SimpleITK==2.3.1 
+tensorflow==2.15.0
 papermill
 ipykernel
 ipython
 ipywidgets
-nibabel
+nibabel==4.0.2
+matplotlib==3.7.1
+scikit-learn==1.2.2
+sklearn-pandas
+numpy==1.25.2